Takifugu flavidus (sansaifugu): 130528376
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Entry
130528376 CDS
T09160
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130528376 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tfs03009
]
130528376 (rexo1)
Ribosome biogenesis [BR:
tfs03009
]
Eukaryotic type
Pre-60S particles
RNases
130528376 (rexo1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
REX3_middle
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
130528376
NCBI-ProteinID:
XP_056893639
LinkDB
All DBs
Position
7:complement(12519191..12527075)
Genome browser
AA seq
1247 aa
AA seq
DB search
MLRSTGFFRGIDCPFYAEYREDKGTKNGCNRPYCHFRHSRSSYGTPADAKKQRELHSAQK
EQGYDPFKPEVIRHQVQQNGKPDDSGDLSGALELVNRAIEEVRGEVEREKRKLSCIGDEP
YEPSESTGFSSSDRFKSKTPPSHLAYDPGSYQMTSEGYTPTPGCSKYTLDSDTPKNSSNS
MEYVPTLVKKPRTHAHQLPSPPHSPKYSNSTPSSKCKYTVDISRPSTDMEYDPLSNYSAG
IASKNKRDKDGVVKVEGSKTYKLPGSDISDDDCAVVEEKPQHQSVDSNKYTVSESDGESS
GTEYRPISLSNLQQRKANSGSLWETLGSKRRERTGSMAESPTQRNKEEVGGHTDVQEGLK
RKDSQEKKKMASQRSHEKSGKSEKVHKPPKDQCKISGSNNGGGSSKEKQLHAKENKKENK
NHAKREDRKNTDKGGTSDKGQSEGSDKKRTDFKIKTVVKVKTDPSKQDKHMENGARESKK
AKVSDKEKELGKNKDRHHKNGKLDSNKGEKNVKKVSKSSSSNKGCSTHSKDKMKQTFSSA
NGKRLVDKRPSMNLSHAELFGDESPDEAEPFEADEGEPEEMLVRKSADAFRRGRLNKRKA
SELTPSSSDDEADRVEEGSRASSNTVAGLGIDFSSLQDDLDFESDPMEECLRIFNESKDV
KKEDKGRQAKQPSQDSEEERSTENTLTTLFPGQKKRVSHFVAKGVDDAPSKPVLQPYKRL
SAQEVCYQRMHTAQQQAAQLSAAAKAAQSTNHPYSGEKKRIAHRPNPQKTSLKTSASGGS
SSSQSLVSVKAQTTAGIVSKTSSTVVQKRVAHTPTMKSSSMKRPIIPTEFGAKIPTNIRQ
RYLNTFIDECVKFCPSEDVAFQTALDEEKLVYERSSSKNIYLNVAVNTLKKLRSKSSSCP
SPGTKEPSSVANRRAQSHEQVLGGRLAATTSFTVNRMGKQQEEKITGARLYRKLKVYLMT
EDQLQEHGYPRTSPEASGRAIIYNLPEKKPASDPFNKICCRCGAEYKVNANGNCVRKEEC
SFHWGQLRRQKVAGGWETSYRCCAAAVGAPGCQVSKQHVQDGRKESLEGYVTTFSKDLPP
DGNAGVFALDCEMCYTKQGLELTRVTVIDSEMKVIYDTFVKPESKVVDYNTRFSGVTEED
LENTTISLRDVQAVLLSLFSAESILIGHSLESDLLALKLIHSSVVDTSIVFPHRLGLPYK
RALRNLMADHLKRIIQDNVEGHDSSEDASACMELMVWKIKEDAKVKR
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgttaagatccaccggcttcttccgagggattgactgcccgttttacgcggaatacaga
gaagacaaaggcacaaaaaatgggtgcaacagaccgtactgtcatttcaggcacagtcgg
tcgtcctacggaacaccagcagatgctaaaaaacaaagggagcttcattcggcacagaaa
gaacaaggctacgatcccttcaaaccagaagttataaggcaccaagtacagcagaatgga
aagccagatgactccggagacctcagcggtgctctggaactggtcaacagggccattgaa
gaggtccgcggtgaggtagagcgggagaagagaaagctctcatgcattggagatgaacca
tatgagcctagcgagagtaccggtttctcttcatcggaccgttttaaaagtaaaacgcca
ccttcacacttggcatatgaccctgggagttatcagatgacatcagaaggttacactccc
accccgggctgcagcaagtataccttggactcagacaccccaaagaacagcagtaattct
atggaatatgttcctacattggtgaaaaagcctcggacacatgcccaccaactcccctca
cctccccacagtccaaagtactcgaacagcacaccttcctccaagtgtaaatacactgtg
gatatttctcggccatctacagatatggaatatgacccgctctccaactactctgcagga
attgcatctaaaaacaagagggacaaagatggtgttgttaaggtggaggggagcaagacc
tacaaactgccaggatcagacatttcagatgatgactgcgccgttgtggaggaaaaaccg
caacatcagagcgtagactccaataagtacactgtctctgaatctgacggagagagctct
gggacagagtatcgaccgatatcacttagtaatctgcaacaaagaaaagcaaacagtggc
tcactctgggaaactttgggaagcaagaggcgagaaagaacaggtagtatggctgagtct
ccgacacagagaaataaagaggaggtgggaggacacacagatgttcaggaaggtcttaaa
agaaaggatagtcaagaaaaaaagaagatggccagtcagagaagtcacgaaaaaagtggc
aaatcagagaaagtgcataaacctccaaaggaccaatgcaaaataagtggtagcaataat
ggtggcggtagcagtaaggaaaagcagcttcacgcaaaggagaacaagaaggagaacaag
aatcacgcaaaaagagaagatcgcaagaatacagacaagggtgggacgtctgataaaggt
cagagtgaaggcagtgacaaaaaaagaacagattttaagatcaaaactgtagtgaaagta
aaaacagatcctagtaaacaagataaacacatggaaaatggagcgagggaaagtaagaaa
gccaaggtatcagataaagaaaaggaactcggcaagaataaagaccgccaccataagaat
ggtaaactagatagcaataaaggagaaaagaatgtaaagaaagtgagtaaaagcagcagc
agcaataaaggctgttctactcacagcaaagataaaatgaagcaaacttttagctcagca
aatggaaaaaggctggtggacaaacggccaagtatgaatctgagccacgctgaactgttt
ggggatgagagtccagatgaggctgaaccattcgaggcggatgagggagaacccgaggaa
atgttggtgagaaaatctgcggacgccttcaggaggggccgcctgaacaagaggaaagcc
tcggagctgaccccgtcgtcgtctgatgacgaggccgaccgcgtggaggaggggagcagg
gcgagcagcaacaccgtggccggcctcggcatcgacttctcgagtctccaggatgatctg
gactttgaatcagaccccatggaggagtgtttgcggatattcaatgaatccaaagacgtg
aagaaggaagacaagggaagacaagctaaacagccttcccaggattcagaggaggagcga
agcacagagaacactttaaccactctcttccccggtcagaagaagagagtctcccatttt
gttgccaaaggagttgatgatgcaccttccaagcctgtgttgcagccatacaagcggctc
agcgcccaggaggtctgctaccagcgcatgcacacggcccagcagcaggccgctcagctt
tccgctgcagccaaagctgcacagagcaccaaccacccctattctggagagaagaagaga
atcgcacaccgtcccaacccacaaaaaacatcactgaaaaccagtgccagtggggggtca
tcctccagccagagccttgtgtctgtcaaggcccaaaccactgctggcatcgtatccaag
acctcatccactgtcgtgcagaagcgagtggcacacacgcccaccatgaagagtagttca
atgaagcgccccatcatacccaccgagtttggagccaaaattcccaccaacatccgccag
cgctacctcaacacttttatcgatgaatgtgtcaaattctgtccatcagaggacgttgcc
ttccagacggcccttgatgaggagaagctggtgtatgagcgcagtagcagcaaaaacatc
tacctcaacgtagctgtcaacaccttgaagaagctgcgcagcaagagcagctcctgtcct
tcccccgggaccaaggagccaagttctgtggccaacagaagggctcagtcccacgagcag
gttctggggggtcgtcttgctgctacaaccagcttcactgttaacaggatgggcaaacag
caggaggaaaagatcactggggccaggctgtacaggaaactgaaggtttacttgatgact
gaggaccagctccaggagcacggatatccaagaaccagcccagaggcttctggccgagcc
atcatttacaacctcccagagaaaaagcccgcttcagatcccttcaacaaaatatgctgc
cgctgtggtgccgaatacaaggtcaacgccaacggcaactgtgtgcggaaagaggaatgt
agctttcactggggacagctgcgtagacaaaaagttgctggaggttgggaaacaagttac
aggtgctgtgctgcagctgtaggagcacctgggtgccaggtgtccaagcaacacgttcag
gacggacgtaaagagtcgttagaaggatacgtcacaacgttcagcaaagatctcccaccg
gatggaaacgcaggggtctttgctctggactgtgagatgtgttacacgaagcaaggcctg
gaactgacaagggtgacggtcatcgactctgagatgaaagtcatctacgacacgttcgtc
aagcctgagagcaaagtggtggattacaacacgcgattctccggtgtgactgaggaggat
ttggaaaataccaccatcagtctgcgagacgtccaggctgtgctgctgagcctgttcagt
gctgagtccatcctcattggtcacagtctggagagcgacctgctcgccctgaagctgatc
cacagttcggttgtagacacgtccatcgtgtttcctcaccgactcgggctcccctacaaa
cgtgccttaaggaatctgatggcggaccacctgaaacgcattatccaagacaacgttgaa
ggtcatgactccagcgaagatgcatctgcctgcatggagttaatggtttggaagatcaag
gaggacgcaaaggtcaaaagatga
DBGET
integrated database retrieval system
