Takifugu flavidus (sansaifugu): 130528490
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Entry
130528490 CDS
T09160
Symbol
comp
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04145
Phagosome
tfs04510
Focal adhesion
tfs04512
ECM-receptor interaction
tfs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130528490 (comp)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130528490 (comp)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130528490 (comp)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130528490 (comp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130528490 (comp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfs04147
]
130528490 (comp)
00536 Glycosaminoglycan binding proteins [BR:
tfs00536
]
130528490 (comp)
Membrane trafficking [BR:
tfs04131
]
Endocytosis
Phagocytosis
Opsonins
130528490 (comp)
Exosome [BR:
tfs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130528490 (comp)
Exosomal proteins of colorectal cancer cells
130528490 (comp)
Exosomal proteins of bladder cancer cells
130528490 (comp)
Glycosaminoglycan binding proteins [BR:
tfs00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130528490 (comp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
EGF_MSP1_1
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
130528490
NCBI-ProteinID:
XP_056893914
LinkDB
All DBs
Position
7:complement(11745494..11751144)
Genome browser
AA seq
747 aa
AA seq
DB search
MLWFLLLSCVLHRGGHVAAGQRDGEIISQIKMTNIALAEIKELLKQQLKEVGFLKNAMME
CEACGMGGLQPEPSCVPNPCHPGVECTVTPEGFQCGSCPDGTEGNGTHCTDVDECSVKPC
HMGVRCINTSPGFRCGSCPAGYRGSQVQGVGLAYAVANKQVCQDIDECQNNSAGCVEDSV
CMNTPGSFRCGPCKTGYVGDQQSGCKPERTCGNGLPNPCHPNAECIVHRDGTIECRCGVG
WAGNGYLCGSDIDIDDFPDEKLNCPERNCNKDNCLKVPNSGQEDADSDGIGDACDDDADG
DGIPNTQDNCVLVPNMDQRNVDEDDFGDACDNCPGVKNDDQRDTDVDKFGDECDEDIDGD
GILNHLDNCKRVPNVDQKDRDGDKVGDACDSCPYVPNPDQSDADNDLIGDPCDTNKDSDG
DGHQDSRDNCPAVINSSQLDTDKDGKGDECDDDDDDDGIPDLLPPGPDNCRLIPNPLQED
SNGDGVGNVCDKDFDNDTIVDTIDVCPENAAVTLTDFREYQTVVLDPEGDVQIDPNWVVL
NQGREIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMW
KQVEQNYWQASPFRAVAQPGIQLKAVKSTTGPGEYLRNALWHTGDTGDQVKLLWKDARNI
GWKDKTSYRWFLQHRPADGYIRVRFFEGPQLVVDTGVIIDATMRGGRLGVFCFSQENIIW
ANLRYRCNDTLPEDFDNYRAQQVQLVV
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggtttctgctgctgagctgcgtcctgcaccgaggaggacacgtcgcagcggga
cagagagatggagaaatcatcagtcaaattaaaatgaccaacattgcattggctgagatc
aaagagctcctgaaacaacagctcaaagaggtcggtttcctgaagaatgccatgatggag
tgtgaagcctgcgggatgggggggttgcagcctgagccctcctgtgtgcctaatccctgc
cacccaggggtggagtgtacggtgacccctgagggtttccagtgcggttcctgtcctgac
gggacggagggcaacggtacgcactgcaccgatgtggatgagtgttccgtgaagccctgt
cacatgggcgtgcgctgcatcaacacgtccccgggtttccgttgcggctcctgtcctgcg
ggataccgggggtcgcaggtccagggtgtgggcctagcttacgccgttgccaacaaacag
gtgtgtcaggatattgacgagtgccaaaacaacagtgcgggatgtgtggaggactcggtc
tgcatgaacacccctggctcgttcaggtgtggcccctgtaagacgggctatgttggggat
cagcagagtggctgcaagccagagagaacctgtgggaatggcctacccaacccctgccac
cccaacgccgaatgcatcgtccaccgagatggcacaatcgagtgtcggtgtggggtagga
tgggccggcaacggctacctgtgtgggtctgacattgacatcgatgacttccccgacgag
aagctgaactgccctgagaggaactgcaacaaggataattgcctcaaggtgccaaactcg
ggccaagaagatgccgacagcgatggaattggagacgcctgcgacgacgatgcagatgga
gacgggatccccaacacgcaggacaactgcgtgttggtgccaaacatggaccaacggaac
gtggacgaggacgactttggggacgcctgcgacaactgccccggcgtaaaaaacgacgac
cagagagacacggacgtagacaaattcggcgacgagtgcgatgaggacatcgatggtgac
ggaattctcaatcacctggacaactgcaaacgagtccccaatgttgaccagaaggatcgg
gacggagacaaagtgggagacgcatgtgacagctgtccttatgttccaaaccctgatcag
agtgacgcggacaatgatctgattggcgacccctgtgacaccaacaaggacagcgatggc
gacggccaccaggactctcgggacaactgtccggcggtcatcaacagctcccagctggac
accgacaaggacggaaagggggacgagtgtgacgacgacgacgatgatgacggtatcccg
gacctgctgcctcccggcccagataactgccgtttgatcccgaaccctctgcaggaggac
tccaacggggacggcgtggggaacgtgtgtgacaaggatttcgacaatgacaccatcgtt
gacactatagacgtgtgtcctgagaatgccgcggtcacgctcaccgacttcagggagtac
cagactgttgttctggatccagagggagacgtgcaaatcgatcccaactgggtggtgctg
aaccagggaagagagatcgttcagaccatgaacagcgacccaggattggctgttggttac
actgctttcagcggcgtggactttgaagggacgttccacgtgaacacggtgacggatgac
gactatgccgggttcatcttcggctaccaggacagttccagcttctacgtggtgatgtgg
aagcaggtggagcagaactactggcaggcaagcccgttccgagccgtggcacaaccaggc
atccagctaaaggcggtcaaatcaacgacgggccctggcgagtacttaagaaacgcgctg
tggcacaccggcgatacgggcgaccaggtcaagcttctgtggaaggacgcccgcaacatc
ggctggaaggacaaaacctcctaccgctggttcctgcaacaccggcccgccgacggctac
atcagagttcggttcttcgagggcccacagctggtggtggacacgggcgtcatcatagat
gccaccatgagaggaggccggctcggagtcttctgtttctcgcaggagaacatcatctgg
gcgaacctgcgctaccgctgcaacgacactctgcctgaggacttcgacaactacagagct
cagcaggtccagctggtagtctga
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