Takifugu flavidus (sansaifugu): 130528564
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Entry
130528564 CDS
T09160
Symbol
hmg20b
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfs03036
]
130528564 (hmg20b)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
130528564 (hmg20b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF4763
YceG_bac
DUF4164
GIT_CC
Protamine_like
Motif
Other DBs
NCBI-GeneID:
130528564
NCBI-ProteinID:
XP_056894068
LinkDB
All DBs
Position
7:6324759..6328134
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AA seq
291 aa
AA seq
DB search
MGGIKQEQTDVAQQPRPSHSADQRADEPKKRGWPKGKKRKKVLPNGPKAPVTGYVRFLNE
RREHMXARYPDLPFPEITKRLGAEWTRLSQSDKQRYLDEAEREKMQYAQELKEYQQTEAY
HITSANIHDKRIKKEDANSIGGLESSFSKGSDLSNRFDMPIFTEEFLDQNKAREAELRRL
RKANIEFEEQNRVLQRHIKDMYNAKERLEAELGMDEKRTQALHQHLLTIKQTLVSSLSTV
PLPGTGETASLGNLDSYLSRLSGVLEGNPHKHRALVSQLCEVLAHLDSDKL
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgggagggatcaaacaagagcagactgatgttgcacagcagcccagaccgtcacattca
gctgatcaacgagctgatgagccgaaaaagagaggctggccaaaggggaagaaaagaaag
aaggtgttgccaaatggccccaaggctccagtgactggatacgtccgctttctgaatgaa
cgtcgagagcacatgtgagctcgctaccctgacctacccttcccagaaatcaccaagaga
ctgggggccgagtggacacggttatcccagagtgataaacagcgttatctggatgaggcg
gagcgggagaagatgcagtatgcccaagaacttaaggaatatcagcagactgaggcttat
cacatcaccagtgctaacatacatgacaagaggattaaaaaagaagatgccaacagtatt
ggcggtttagagtcctctttttcaaagggctctgatctctcgaacagattcgatatgcca
atcttcacggaagagttcctggatcagaacaaagctcgagaggctgagttgcgccggctt
cgtaaggccaacattgagtttgaagagcagaacagagtgctccagaggcacattaaagac
atgtacaatgctaaagagaggctggaggctgaactgggaatggatgagaaacgaacccaa
gctcttcaccaacacttgttgaccattaaacagactctggtcagcagtctgtcaacagtt
cccctaccaggtacgggcgagacagcgtctcttggaaacctggattcatatctgagtcgt
ctcagtggagtgctggagggaaacccacacaagcatcgtgcactggtcagccagctctgt
gaagttctcgcccacctggacagtgacaagttatga
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