Takifugu flavidus (sansaifugu): 130528764
Help
Entry
130528764 CDS
T09160
Symbol
rnf220b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220 isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130528764 (rnf220b)
Enzymes [BR:
tfs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130528764 (rnf220b)
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130528764 (rnf220b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4
Pox_A_type_inc
zf-RING_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
130528764
NCBI-ProteinID:
XP_056894432
LinkDB
All DBs
Position
7:9059983..9079773
Genome browser
AA seq
559 aa
AA seq
DB search
MDLHRPFKMDSPSYLPPPLASPALMVLASTAEAGRDASVPCQAPRPFGVPVSMEKDLHLP
FPSASYTFTSMYQRQGSISGAFPSRDFPASLLHLHPQFTPPNLDSTTLSMLNHSGVGAFR
PFSSPQEERESGLYQSAFSPAKRLKSCFPEVEGKEFDFGSPAGSLKAGEDSGRKLFSMSG
LLSDGEASSSPEERKEHSKMKGFYDSQAPACPVCQVVLRPGELQDHMEQELSKVAQLHIS
GSPVQHDHAARTPKSLSLSLHIKREGGSPTSPPRPAEDAHSDRYQTFLRVRANRHTRLNV
DDLCWCRCYVKSAPLRPHSAGAHVDCIQDVRIGKLKRKKAEDGQEGSGDLAEDEWNERRR
LHMTTLVRGLRDAVLVSTTSKECRDSDADLDVDGDDTLEYGRAQYTETDVIPCPGESSQE
SAANSSSSTAVSDSRLKPEFSKWSNEGSPSTSSVDKVDCSGSGLPKTCRNPELETLSEDS
PLTTLDALKVRIRDLEKQLSKGDRFKCLICMDTYTTPLTSIQCWHVHCEECWLRTLGAKK
LCPQCNTITSPGDLRRVFL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggaccttcaccgccccttcaagatggacagcccctcctacctgccacctcctctggcc
tcccctgccctgatggtcctggcctccactgctgaggccggtcgggatgcctccgtcccc
tgccaggctcccaggcccttcggtgtccccgtttccatggagaaagaccttcaccttccc
ttcccctcagcctcgtacaccttcacatccatgtatcaacgccagggctccatatctggt
gcctttccctcccgagacttcccagcgtccctgctccacctccatccccagttcacccca
ccaaacttggacagcaccactctcagcatgctcaaccacagcggcgttggcgctttccgg
cctttctcctcaccacaggaagaacgcgagtctgggctttaccagtcggccttcagcccc
gccaagaggctgaaaagctgctttccagaggtggaggggaaggagtttgactttggctcc
ccagcaggctccctcaaagctggggaagactcagggaggaagctcttctccatgtctggc
ctgctgtctgacggagaggcttcgtcaagtccggaggagcgcaaagagcacagtaaaatg
aaggggttctatgacagccaggccccagcatgtccagtctgccaggttgttcttcgacca
ggagagctgcaggaccacatggagcaggagttgtccaaggtggcccagctgcacatcagc
ggctctcctgtgcagcacgatcacgccgccaggacgccgaagtctctctctctttctctc
cacatcaagcgtgaaggaggctcccccacctcgccgcctcggccagctgaggatgcccac
tcggaccgataccagacgttcctgcgtgtgcgggccaacagacacaccaggctgaacgtc
gatgacctctgctggtgcaggtgctacgtcaaatctgcccccttgcgcccccacagtgct
ggagcccacgtagactgcattcaagatgtcaggattgggaagctgaagaggaaaaaagca
gaagatggacaggagggctcaggggacttggccgaagacgagtggaacgagaggaggagg
ctgcacatgacgacgctagttcggggcctcagagacgcggtcctggtgagcacaacttct
aaggaatgtcgagacagcgatgccgacctggacgtggacggagacgacactctggagtac
ggcagagctcaatacacagagacagacgtcatcccctgcccaggagagagctcccaggag
tcagcggcgaacagcagcagcagcaccgcggtgtccgactccagactgaaaccagaattt
tcaaaatggtcaaacgaagggagtccgtccaccagcagcgtggacaaagtggactgcagc
gggtccggcctccccaaaacctgcagaaaccccgagttagaaacgctctcagaggactcc
ccgctgacgactctggatgcacttaaagtgcgcatacgtgatttggagaaacagttgtcg
aaaggagacagatttaaatgccttatctgcatggacacgtacaccaccccgctcacctcc
atccagtgctggcatgttcactgtgaggagtgttggctacggactctgggagcaaagaag
ttgtgtccccagtgcaacaccatcacctcgcccggtgacctgagacgagtctttctgtga
DBGET
integrated database retrieval system
