Takifugu flavidus (sansaifugu): 130528784
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Entry
130528784 CDS
T09160
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130528784 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tfs03310
]
130528784 (rorca)
Transcription factors [BR:
tfs03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130528784 (rorca)
Nuclear receptors [BR:
tfs03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
130528784 (rorca)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
130528784
NCBI-ProteinID:
XP_056894462
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Position
7:complement(7119840..7130203)
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AA seq
473 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQECAVHGTREESVDLGD
HGCAYRRGSGTALGDLDEITTLPDGLLFDLPLTPEDEGGDYCNLEMLGGSAGSSSSSQSS
PEQNNLDCVDKHGIKHEYQLLHDSGLFSHTIHNPLPEPCSLLDTERITQSVVKSHIETSQ
YSTEELKRMAWTLYSPEETHSYQMKSAEAMWQQCAVHITNAIHYVVEFAKRITGFMDLCQ
NDQIILLKAGCMHVLLIRMCRAYNPINNTLLFDGKCATPQLFKALGCDDLVNAVFDLAKG
LSRLQMSEEEMALFSAAVLLSPDRPWLTDVQKVQKLQEKVYVALQRCLQRDGGSEEKLTR
MVSKLPVMKSICNLHIDKLEFFRLVHPETAYTFPPLYREVFGSEVTFPDSTEG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaagtgattccctgcaaaatctgtggggataaatcctcagggatc
cactacggcgtcatcacctgtgaaggctgcaagggtttcttccgccgcagccaacaaaac
aatgctatgtactcctgctcaaggcagaggaactgcctcatcgaccggaccaaccggaac
cgctgtcagcactgcaggctgcagaaatgcctggctctgggcatgagccgcgatgccgtg
aagttcggccgaatgtccaaaaagcagcgcgacagcctgtatgccgaggtccagaaacac
caacagtcccaggagtgcgcggtgcacggcacccgcgaggaaagcgttgacctgggcgac
cacggctgcgcctacagaagaggctctggcacggcgctcggcgatctggatgaaatcacc
acgctaccggacggcctcctctttgacctgccgctcactcctgaagatgaaggaggagac
tactgtaacctggaaatgctgggcggcagcgcgggcagcagctcgtcctcgcagagttca
ccagaacagaacaacttggactgtgtcgacaaacacggcatcaagcacgagtaccagttg
ctgcacgactctggactcttctcacacaccatccacaacccgctgcctgaaccctgctcc
ctgctggacactgagcgaataacccagagtgtggttaagtcccatatcgagaccagccag
tacagcacagaggagctgaaaaggatggcgtggactttgtacagtccggaggagacacac
tcctaccagatgaagtctgcggaagcgatgtggcagcagtgtgctgtccacatcaccaac
gccatccactacgtggtggagtttgccaagcgcatcacgggcttcatggacctctgtcag
aacgatcagatcatcctcctcaaagcaggctgcatgcacgttctactgatccgtatgtgc
cgggcctacaaccccatcaacaacacactgctctttgatgggaagtgtgcgactcctcag
ctgttcaaagctctcggctgcgacgaccttgtgaacgccgtgtttgacctggcgaaaggc
ctgagccgcctacagatgtctgaggaggagatggcgctgttcagtgctgctgtgctgctc
tcgccagaccggccctggctcacagacgtccagaaggtgcagaagctgcaggagaaggtg
tacgtggctctgcagcgctgcctgcagagagacggagggtcggaggagaagctaacgagg
atggtgtccaaactcccagtcatgaagtccatctgcaaccttcacatcgacaaactggag
tttttccgcctggtccaccctgagacggcgtacaccttccctcctctgtacagggaggtt
tttggcagcgaagtcaccttcccagactccacggagggctag
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integrated database retrieval system