Takifugu flavidus (sansaifugu): 130528819
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Entry
130528819 CDS
T09160
Symbol
rnf13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130528819 (rnf13)
Enzymes [BR:
tfs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130528819 (rnf13)
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130528819 (rnf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
zf-RING_16
Prok-RING_4
FeoB_associated
zf_RING_Vps8_fungal
Hemotin
DUF7027
zf-RING_4
Glucos_trans_II
PHDvar_NSD
RINGv
PHD
zf-RING-like
zf-C3H2C3
LapA_dom
TMEM156
Motif
Other DBs
NCBI-GeneID:
130528819
NCBI-ProteinID:
XP_056894542
LinkDB
All DBs
Position
7:complement(9530360..9549547)
Genome browser
AA seq
380 aa
AA seq
DB search
MLLSLGMLMLSATQIYTIFTVQLFAFLNLLPVEADIAAYTFDNKTESFEDLPARFGYRLP
TEGLKGFLIGARPENACEPIEPPPRDNLTGAFIVLIKRFECNFDVKVLNAQKAGYRAAIV
HNVNSDDLISMGSNDLDIMKQIDIPSVFVSEETANSLKEDYIYDKGGHVVLMPDFSLPLE
YYLIPFLIIVGICLILIVVFMITKFVQDRRRARRSRLHKDQLKKLPIHKYKKGDSYDVCA
ICLDEYEEGDKLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDSEEGDS
GPDENEVSESTPLLRSLASTSAHSFGTMSAESRSEQDQDSSEYDEELDSSDSEEEVTVET
VVVQMQQPRSDGRDHDPARV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctcactgggaatgctgatgctctccgccacacaaatttacaccatcttcacc
gttcaactctttgctttcctcaacctgctgcccgtggaggccgacatcgctgcgtacaca
tttgacaacaaaacggaaagctttgaggacttgcctgcaaggtttgggtatcggcttcca
actgagggtctgaagggcttcctgatcggggcgcgaccagaaaatgcatgcgagcccatc
gagcccccccccagggacaacctgacgggcgccttcatcgtcctcatcaagcgctttgaa
tgcaactttgacgtcaaggtcctcaacgctcagaaagcagggtacagggcagccattgtt
cacaatgtgaactcggacgacttaatcagcatgggatccaatgatttggatatcatgaag
cagatagatatcccctcagtgtttgtgagcgaagagacggccaattctttaaaagaagac
tacatttacgataaagggggacatgtggtcctcatgccggatttcagcctccccctggaa
tactacctgatccccttccttatcatcgtgggaatttgccttatcctcattgttgttttc
atgatcaccaagtttgtgcaggaccgacgcagagctcgccggagccgcttacacaaagat
cagctgaagaaactccccattcacaagtacaagaaaggcgacagctatgacgtgtgcgcc
atttgcctggatgaatacgaagagggggacaagctcagagtcctgccatgttctcacgcc
taccacagcaaatgcgtggatccgtggttgaccaaaaccaagaagacgtgtccggtgtgc
aagcagaaagtggttccctcgcagggcgactccgattccgactccgaggagggcgacagc
ggccccgacgagaacgaggtgtcggagagcaccccgctgctgcgctccctggcctccacc
agcgcccactccttcggcaccatgtcggcagagtcgcgctcggagcaggaccaggattcc
tcggaatacgacgaagagctggacagcagcgacagcgaggaggaggtcaccgtggagacg
gtggtggtgcagatgcagcagccccgctccgacggccgcgaccacgacccggcccgcgtt
tga
DBGET
integrated database retrieval system
