Takifugu flavidus (sansaifugu): 130528831
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Entry
130528831 CDS
T09160
Symbol
pdgfra
Name
(RefSeq) LOW QUALITY PROTEIN: platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04010
MAPK signaling pathway
tfs04020
Calcium signaling pathway
tfs04144
Endocytosis
tfs04510
Focal adhesion
tfs04540
Gap junction
tfs04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130528831 (pdgfra)
04020 Calcium signaling pathway
130528831 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130528831 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130528831 (pdgfra)
04540 Gap junction
130528831 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130528831 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tfs01001
]
130528831 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tfs04090
]
130528831 (pdgfra)
Enzymes [BR:
tfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
130528831 (pdgfra)
Protein kinases [BR:
tfs01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
130528831 (pdgfra)
CD molecules [BR:
tfs04090
]
Proteins
130528831 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
Motif
Other DBs
NCBI-GeneID:
130528831
NCBI-ProteinID:
XP_056894572
LinkDB
All DBs
Position
7:4209545..4222141
Genome browser
AA seq
1473 aa
AA seq
DB search
MDGTKTYVVFGVILVVSVTSGLSPPTIVSNEEEFILLPSSILNVSCTGKRNVVWAEPLPT
NSFVFPGYYTATLFIYNATVKNTGYYTCTYVHLEAEQEGQPQEANEAEIYVFVPDAQVPF
VPETPDNLVVTMDPSGVPISCRVSDPHSHVTLRSVSTGDEMSAFYDSRIGFFGMLSPGQY
QCETFVNGRIFRSDIYTVEDEASTETEDFEVDVRASEETVRAGQPFNVTCTGPPGPGFQQ
QWLHPKSQAVEAVQVKETFPDRVVYVLSVPRAASQDSGTYECSITHVMSGAVRAGGAAVA
IFEENSIVALDHSGILTSEFVSLLEETEFTILINAYPPPKVHWLKDGESLSENYFILTKT
SHLEGNRYQSILILRQPLLKDSGNYTIMATSGSQTAQFSFTLKMKAPSASMFPPSSAPLL
LPQLEELVVPLHTAFTLTCQGEATIAWDVPLDVPEKMQEDNSGLFVTTISVDSASAMHTG
YYRCFYRRNATEDVDEAMQSSIYVYVPDPDVPFVPLVVPFGNHVLSDHEEMEIQCRVSDP
SANVTLINVDTQQPVPCVYDSKRGALGVFTAGTYVCKAVVNGAEHYSEEYIVHGWIGGSG
LHVELTAQHTVLLVGDTITVNCLARGSEILEDHWKYPGKVANRAIKTVHENKKDQEILYT
LTVPQASVKDTGIYSCSITDVVTNMSQTKQIAIRVYASEFMSIQPKFGEYESAELDEVCE
FRAEISSFPTASVTWLKDSVPLSDVTAEISTSLRQLSETSYMSVLTLIRAKEEDSGNYTM
RVENGDQSRTVXLILEVKVPAVIVDLMDIHHGSATGQSVVCITRGQPTPLVEWFVCKNIK
HCANDTSSWVPLPVNSTEVTMDSRFDEDNNLETQVIFGHLENTLAVRCLARNEMAAVSRE
IKLVSNGPHPELTVAAAVLVLLVIVIISLIVLVVIWKQKPRYEIRWRVIESVSPDGHEYI
YVDPMQLPYDSRWEFPRDRLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA
RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRESF
LNPKPEKSNKKELDIFGINPADESSRSYVILSFESRGDYMDMKQADNTQYVPMLEISNAS
KYSDLQGSNYDHPPSQKGSNDGEMDQLLSDNMSEGLTTNDLLSFTYQVAKGMEFLASKNC
VHRDLAARNVLLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYTT
LSDVWSYGILLWEIFSLGGTPYPGMIVDSSFYNKIKSGYRMSKPEHAPQDVYDMMMKCWN
SEPEKRPSFLGLSDTIASLLPSSYKRHYERVNHEFLKSDHPAVTRVCVDNDDAYIGITYK
NQGKLKDRESGFDEQRLSSDSGYIIPLPDLDPISDEEYGKRNRHSSQTSEESAIETGSSS
STFAKREGETLEDITLLDEMCLDCSDLVEDSFL
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atggatgggacaaagacgtatgtcgtctttggggtcattctggtggtttcagtcacctct
ggactgtcacctccaaccattgtctccaatgaggaggagttcatcctgctgcccagttcc
attttgaacgtcagctgcaccggtaaaaggaacgtggtctgggccgagcctctgccgaca
aactccttcgttttccccggatactacacggcgacgctgttcatttacaacgccacggtg
aaaaacaccggctattacacctgcacatatgtacatctggaggctgaacaggaaggacaa
ccacaggaggccaacgaggcagaaatctatgtgtttgtcccagacgcacaggttcctttc
gtccctgagacgcccgataacttggtggtcaccatggaccccagcggagttcccatctcc
tgccgtgtttccgacccccactcccacgtcaccctgaggagcgtgtccacgggagacgag
atgtctgccttctacgacagcaggattggctttttcggaatgctgtcgccgggccagtac
cagtgtgagacgttcgtgaacggccggattttcaggagcgacatttacacggtggaggat
gaggcctctacagagacagaagactttgaggtggacgtgagggccagcgaggagacggtg
agagcaggccagcccttcaacgtcacctgcaccggcccgccaggacccggcttccagcag
cagtggcttcaccctaaatcacaggctgtggaggcggttcaggtgaaagagacttttccg
gatcgggtcgtctacgtcctcagcgtcccgcgagccgcctctcaggacagcggcacctat
gagtgctccatcacccacgtcatgagcggagcggtcagagccggcggggcggccgtcgcc
atctttgaggagaactctattgtggcgctggaccacagcgggattctgacctcagagttc
gtcagccttctggaggagacagagttcaccatcctcatcaacgcctacccaccccccaaa
gtgcactggctaaaagatggcgagtcgctgtcggaaaattacttcattctcaccaaaacc
agccacctcgaaggaaatcggtatcaaagcatcctgatcctacggcagccgctgctgaag
gacagcgggaactacaccatcatggccacgagtggctctcagacggctcagttctccttc
accctcaaaatgaaagctcccagcgcgtcgatgttcccgccctcctcggctccgttgctg
ctgccacagttggaggagctggtggttcccctccacaccgccttcactttaacatgtcag
ggggaggcgacgatagcctgggacgtgccgctggacgtgccggagaagatgcaggaggac
aacagcggcctcttcgtcaccactatcagcgtggactccgccagcgccatgcacaccggc
tactacaggtgcttctacagaagaaacgccacggaggacgtggacgaagcgatgcagagt
agcatctacgtctacgtgccagaccctgacgtcccctttgttccgttggtggtgcctttc
ggcaaccacgtcctgtccgaccacgaggagatggagatccagtgccgggtgtcggatccc
agcgccaacgtcacgctgataaatgtcgacacccagcagcccgtgccttgcgtgtacgat
agcaagaggggcgctctgggcgtgttcacggctgggacgtacgtctgcaaggccgtcgtc
aacggagcggagcactacagcgaggagtacatcgtccatggctggatagggggctccggg
ctgcacgttgagctgacggcccaacatacggttctgctggtgggagacaccatcacggtc
aattgtttggctcggggatctgagattttggaggaccactggaaatatcccgggaaagtg
gctaatcgtgctattaagacggttcacgagaacaaaaaggatcaggagattctttacacc
ctgacagtcccgcaggcttccgtcaaggacacgggcatttactcctgttccatcaccgat
gtagtaaccaacatgagtcagaccaagcagatcgccattcgcgtttacgcgagcgagttc
atgtccatccagccaaagttcggagagtacgaatcggccgagctggacgaggtctgcgag
ttcagggccgagatcagctccttcccgaccgctagcgtcacgtggctcaaagacagcgtc
ccgctcagcgacgtgacggcggagatttctaccagcctccggcagctcagcgagaccagc
tacatgagtgtcctgaccctgatccgagccaaggaggaggacagcgggaactacaccatg
cgagtggagaacggagatcagagtcgcaccgtcnagctgatcctggaggttaaagtgccc
gcagtcatcgtggacctgatggacatccaccacggctcagctacaggccagtccgtggtg
tgcatcaccagaggtcagcccactcctctggtggagtggttcgtctgcaagaacatcaag
cactgcgccaatgacacctcatcctgggtgcccctccccgtcaactccacggaggtcacc
atggattcgcgcttcgacgaggacaataatctggagacccaggtcatatttgggcacctg
gagaacacgctggcggtgcgctgcctggccaggaacgaaatggccgccgtcagcagggag
atcaagctggtgtccaatggccctcatccagagctgactgtcgcggcggctgtgttggtg
ctcctggtcattgtcatcatctcactcattgtcttggttgtgatctggaaacagaaaccg
cgatatgaaatccgctggagggtcatcgagtctgtaagcccggatggacacgagtacatc
tacgtggatccaatgcagcttccctacgactccagatgggagttcccccgggacagactt
gtgttgggtcgcatcctgggctctggagcctttgggaaagtggtggagggcaccgcctac
gggctcagccgctctcagcctgtcatgaaggtggcagtaaagatgctcaaacccacagca
cgctccagcgaaaaacaggccctgatgtctgagctgaagatcatgacccacctgggaccg
cacctcaacattgttaacctgctgggcgcctgcaccaaatcaggccccatatacatcatc
actgagtactgtttctacggcgatctggtcaactacctgcacaagaaccgggagagcttc
ctcaacccgaagccagagaagagcaacaaaaaagagttggacatttttggaatcaacccc
gcggacgagagcagcagaagttatgtgatcctgtccttcgagagcagaggcgactacatg
gacatgaagcaggccgacaacactcagtatgtgcccatgctggagataagcaacgcctcc
aagtactctgacctccagggctccaactacgaccacccgccctcgcagaaaggatcaaat
gacggcgagatggatcaactgctgtcggacaacatgagcgagggcctcaccaccaatgac
ctgctgagtttcacctaccaggtggctaaaggaatggagttcctggcttcaaaaaattgt
gtccaccgagatctggccgccaggaacgtcctgctctctcagggcaagatagtgaagatc
tgcgactttggactggcgcgagacatcatgcatgacaacaactacgtctccaaaggaagc
acgttcctaccagtgaagtggatggctcccgagagcattttcgacaacctgtacaccacg
ctgagcgacgtctggtcgtacggcatcctgctgtgggagatattctctttaggcggcacg
ccatacccaggtatgattgtggattccagcttctataacaagatcaagagtggctacagg
atgtccaaaccagagcacgcgcctcaggatgtgtatgacatgatgatgaagtgctggaac
agcgagccggagaagaggccctctttcctgggtctcagtgacaccatcgcctctttgctg
ccctccagctacaagcggcattacgagagggtgaaccacgagttcctaaagagtgaccac
cctgccgtgacccgagtgtgcgtagataacgatgacgcctacatcgggatcacctacaaa
aaccagggaaagttaaaggacagggaaagtggatttgatgagcagcggctcagctctgac
agtggctacatcatccccctgcctgacctggaccccatttctgatgaggaatacgggaag
aggaacagacacagctctcaaacgtccgaggagagcgccatcgagacggggtccagcagc
tccactttcgcaaagcgcgagggcgagacgctggaggacatcacgcttttggacgagatg
tgtctggactgtagtgacctggtggaggacagctttctgtga
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integrated database retrieval system
