Takifugu flavidus (sansaifugu): 130529258
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Entry
130529258 CDS
T09160
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tfs03037
]
130529258 (ift88)
Cilium and associated proteins [BR:
tfs03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
130529258 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_14
TPR_7
TPR_19
TPR_6
TPR_16
TPR_11
ANAPC3
TPR_17
ARM_TT21_4th
ARM_TT21_5th
TPR_9
TPR_CcmH_CycH
MIT
ARM_TT21_C
TPR-S
TPR_Slam
HAT_PRP39_C
Coatomer_E
RNPP_C
FumaraseC_C
ARM_TT21_2nd
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
130529258
NCBI-ProteinID:
XP_056895260
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All DBs
Position
1:2666225..2676259
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AA seq
863 aa
AA seq
DB search
MKHSGPDVEEDDLYSGYNNYNPTFDYEAIENDEGFQQAVKTTHEKRPPMTAKFPGTAIGA
RPLVSSFGSRNALASSMGRPMTGAVQAGAARPMTAVSAAGYSSSLTRGPAFDPLGQARGP
APPLEDKNEDTPEEKIKILEKKVNDLVLESCMAQSSGNFQLALEKAKEASRKERTLVRQR
EQSDKADQINIDLYGSVLLNLANQYENNEMYPEALQNYKLIVKNRLLQNAGRFNVSMANI
YVKQQNYMEAIKLYQKALDQIPNTFKELKMKIMENIGLVFVRIGQYPKAIIYFEDIMSQS
PNTKTGYNLVLCYYAIGDKERMKKGFQKLISVPLGFDEDKYIPSNDDDSTDMFTEAIQND
KLHQMERNLKQRSEKYIMTAAKLIAPAIETTFAAGFDWSVDVVKSSQYTDLADDLEIIKA
VTYLRQKDFNQVTAIETLKTFEKKDTRAKSTAGTNLSFLYFLEEDYEQAERYADVAMSTD
RYNPGALNNKGCTVFVKQEYEKAAEFFKEALRNDSSCTEALYNLGLTYKKLNRLEESVDC
FLKHHAILRNSAEVMYQLANLYELLEDPQQAIQWLMHVISVSPTDCGVLAKLGQLFDDEG
DESQALHHYTESFRHFPCDIGVAAWLGTYYFKKQYFEKAIKYFERATLIQPNEVEWHLRV
AGCYRRSGNYHTALETYKETHQRFPEDIECLTFLVRLTNDMGLEEVQEYANKLKKAEKMR
EVREQRMKAGREGSGRGWREGSAGSAGVSTPVLISPKKAFVTASEMDVKAVPHPESKQLD
PLLDSGGDRSHSGGSAKGERLSAKMRSLPVSNEPYETSAPKELDAFYVDPLGPQMERPKT
GAKKRVEDDDFEDEELGDDLLPE
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacagcggcccagatgtggaggaggacgatctttattcgggttacaataattat
aacccaacatttgactacgaggcaatcgagaatgatgagggcttccaacaagcagtgaag
acgactcatgaaaaaagaccaccgatgactgccaagttccctggcactgccattggagct
cggcctctggtgtcttcctttggttcccgaaatgctcttgcttcttccatgggcagaccc
atgactggagctgtgcaggctggggcagcacggcccatgacagcagtcagtgcagcaggt
tacagctcctctctcacccgtggtcctgcatttgaccctctgggacaggccagaggtcct
gctcctccacttgaagacaagaacgaggacacgcccgaggagaaaatcaagatcctggag
aagaaagtaaacgacctggtattagagagctgcatggcacagagctcgggaaacttccaa
ctggctcttgagaaagccaaagaggcatccaggaaggagagaacactggtgcgacagcgg
gaacagtctgacaaagcggaccagatcaatatagatttatatggatctgtgttgctcaat
ctggcaaaccagtatgaaaataatgaaatgtacccagaagctctgcagaactacaaactc
atagtgaaaaacaggctgctccaaaacgctggtcgttttaatgtcagcatggccaacatc
tatgtaaagcagcagaattacatggaagccatcaagctgtaccaaaaggcactggatcag
atccccaacactttcaaagagctgaagatgaagatcatggagaacatcggcctggttttt
gtccgcattggccagtaccctaaagccatcatctattttgaggacatcatgagtcagagt
cccaacactaaaaccggctacaacctggtcctgtgctactacgccatcggtgataaagag
aggatgaaaaagggtttccagaagctcatctctgttccgctcggctttgatgaagacaag
tacatcccgtcgaacgatgacgacagcacagacatgttcactgaggcgatccaaaatgac
aaactacaccagatggagcgaaacctaaaacagcggtctgagaagtatatcatgactgca
gccaagctcatcgctcctgctatcgagaccacttttgctgctggctttgactggagtgtg
gatgtggtgaagagctctcagtacacggaccttgccgatgatctagagataattaaagct
gtaacctacctcagacagaaggattttaaccaggtgacagccatagaaaccctgaagact
tttgaaaagaaggacaccagagcgaagagcactgcaggcaccaacctgtccttcctgtac
ttcctggaggaggactatgagcaggctgagcggtacgcagacgtcgccatgtccacagac
cgctataaccccggagcacttaataacaaaggctgcacggtgttcgtcaagcaagagtac
gagaaggccgccgagttctttaaagaagcactcaggaatgactcgagctgcacagaggcc
ctctataatctgggattaacctacaagaagctgaatagactggaggaatctgtggactgc
tttttgaagcatcacgccatcctgaggaacagtgcagaagtcatgtaccagttggccaac
ctatatgagcttctggaagaccctcaacaggcgattcagtggctgatgcacgtcatcagt
gtcagccccaccgactgtggcgtactggccaaactgggacagctgtttgatgacgagggg
gatgagtctcaggctttgcaccattacacagagtctttcaggcacttcccctgtgacatc
ggcgtggctgcatggctgggaacctactactttaagaagcagtactttgagaaagccatt
aagtattttgaaagagcaacactgattcaaccaaatgaggtggagtggcacctgagagtg
gcaggttgctacagaagaagtgggaattaccacacagccctggagacgtacaaggaaacg
catcagaggtttcctgaagatatcgagtgtctgactttcctggtgaggctgactaacgac
atgggactggaggaggtgcaggagtacgccaataaactcaagaaggcggagaagatgagg
gaagtccgtgaacagaggatgaaggcggggcgggaaggcagcggacgagggtggcgagaa
ggcagcgccggcagcgcaggtgtctccacacctgtcctcatctcccctaagaaggccttc
gtcacagcgtcagaaatggacgtgaaagcagtacctcaccctgagtctaaacaactggat
ccactgttggattcagggggagaccgcagccacagcggcggcagcgcgaaaggcgagcga
ctgagcgccaagatgaggtcacttcctgtttccaatgagccctacgagaccagcgctcca
aaagagctggacgccttctacgtggacccgctggggcctcagatggagcggccgaagacg
ggcgccaagaagcgggtggaggacgatgactttgaggacgaggagctgggagacgacctg
ctgcccgagtag
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