Takifugu flavidus (sansaifugu): 130529332
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Entry
130529332 CDS
T09160
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130529332 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130529332 (mid1)
Enzymes [BR:
tfs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130529332 (mid1)
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130529332 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
Ig_DSCAM-DSCAML_C
zf-RING_5
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
130529332
NCBI-ProteinID:
XP_056895436
LinkDB
All DBs
Position
1:complement(10555193..10576713)
Genome browser
AA seq
669 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPSEPIQSISAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRYQKASQSGPNSPKETRREGAVPDSRAMTSPGDRVP
CQFCEQDPPQDAVKTCITCEVSYCDECLKATHPNKKPFTGHRLMEPLLDSHLRGIMCAEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHHVAALGDRYDKLKESLESNLNNLIKRTSDLE
SLMGKLIQTCQHVEVNASRQENKLLEECDLLVNIIQQRRQIITTKIKEGKAVRLRKLAQQ
IAGCKQCIERSSSLITQADQALKEADHTRFLQTAKSICERVSMATASSQVLLPEINLNDT
FDTFALDFTREKKMLENLDYLTAPNPPVIREELCTASYDTITVHWTSDDEFTVVSYELQY
AIFTCQSNVVSLCNSADSWMIVPNIKQNHYTVHGLQCGTKYIFIVKAINQAGNRSSEPAK
LKTNSQPFRLDPKSAHRKLRVSHDNLTVERDETSAKKSHSQDRFTSHSSYGVTGNVYIDS
GRHYWEALIGGSTWFAVGVAYKSAPRHEWVGKNSASWVLSRCNNSWVARHNSKEMPVEPP
PHLRRLGILLDYDSGSLSFYDAVGSQHLYTFDVAFAQPVCPVFNVWNRCLTILTGLPIPD
HLEGTDYNK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgctggagtcggagctgacctgtccaatctgtctggagctatttgaggacccg
ctgctcttgccctgcgctcacagcctttgtttcaactgcgcccaccgcatcctggtgtca
cactgcacgcccagcgagcccatccaatccatcagcgccttccagtgcccgacctgccgc
tatgtcatcaccctcaaccagaggggcctagagggactcaaacgcaacgttacgctgcag
aacatcattgaccgttaccagaaggcatcgcaaagcggacccaactctcccaaagagacg
cggcgcgagggagccgtccccgacagcagagccatgacgtcacccggcgacagggtgccg
tgtcagttctgtgagcaggatcctcctcaggatgccgtgaagacctgcatcacctgcgag
gtgtcctactgcgacgagtgtctcaaggccacccaccccaacaagaagccgttcacaggt
caccgcctcatggagcctctgctggactcccatctgcgggggataatgtgcgcggagcac
gaggacgagaaggtcaacatgtactgtgtgaccgacgaacaattgatctgcgcattgtgc
aagctggttggtcgacacagggaccatcacgtggcggccctcggcgatcgatacgacaag
ctcaaggaatccttggaatctaacctcaacaatctaatcaagaggaccagtgatttggaa
agtctgatgggtaaacttattcaaacctgccagcacgttgaggtaaatgcatccagacag
gaaaacaagctgctggaggagtgtgacctgctcgtcaacatcatacagcagcgaagacaa
ataataaccaccaagataaaagaaggaaaggccgtgcggctgaggaagctcgcccagcag
atagccggctgcaagcagtgcatcgagaggtcctcttccctcatcacacaagccgaccag
gcgctcaaggaggcggaccacactcgtttcctccaaactgctaaaagcatctgtgagagg
gtttccatggcaacagcatcttcacaagtgttgttaccagagataaacttgaatgacaca
tttgatacttttgctctggatttcacacgggagaagaaaatgcttgaaaatttagattac
ctcacagcaccgaatcctccagtaatccgcgaggagctgtgcacagcttcgtacgacacc
atcacagttcactggacgtcggacgacgagttcaccgtggtgtcctatgaacttcagtac
gccatcttcacctgccagtccaacgtcgtcagtttgtgcaactctgccgacagctggatg
attgtaccaaacatcaagcagaaccactacactgtgcacgggctccagtgcggaaccaag
tacatctttattgtgaaagccataaaccaggcgggaaaccgcagcagcgaaccagcaaag
ctcaaaactaacagtcagcccttcaggttggacccaaagtcagctcaccgaaagctgagg
gtgtctcacgacaacctgacggtggagagggacgagacatcggccaaaaagagccacagt
caggaccgattcacgagccacagcagctacggcgtgacgggaaacgtctacatcgacagc
gggcgccattactgggaagctctgattggaggaagcacatggtttgcagtgggagttgca
tacaagtcggcgccgagacacgagtgggtgggcaaaaactcggcctcctgggtgctgtcc
agatgcaacaactcgtgggtggcgcgccacaacagcaaggagatgcccgtggagcccccg
ccacacctgcggcgcctgggaatattgttggactacgactccggatctctgtctttctac
gacgctgtgggctcgcagcacttgtacacgttcgacgtcgcttttgctcagccggtctgt
cctgtgtttaacgtgtggaacagatgtctgacaatcctcaccggactccccatcccagac
cacttagaggggacagactacaacaagtga
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