Takifugu flavidus (sansaifugu): 130529418
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Entry
130529418 CDS
T09160
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04010
MAPK signaling pathway
tfs04020
Calcium signaling pathway
tfs04260
Cardiac muscle contraction
tfs04261
Adrenergic signaling in cardiomyocytes
tfs04270
Vascular smooth muscle contraction
tfs04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130529418
04020 Calcium signaling pathway
130529418
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
130529418
09153 Circulatory system
04260 Cardiac muscle contraction
130529418
04261 Adrenergic signaling in cardiomyocytes
130529418
04270 Vascular smooth muscle contraction
130529418
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfs04040
]
130529418
Ion channels [BR:
tfs04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130529418
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
130529418
NCBI-ProteinID:
XP_056895578
LinkDB
All DBs
Position
8:complement(8405739..8420009)
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AA seq
1840 aa
AA seq
DB search
MATNGDPAKPVIMNEEELKRKQKEKLKKLQATGGNPRPTRSLFFFTLKNPFRKACINIVE
WKAFEIIILLTIFANCVALAVFLPMPEEDSNNTNASLESLEYIFLVIFTLECFLKIVAYG
FVFHEGAYLRNCWNILDFVIVFMGLFTFALDTINKIAGVPLEKGGGFDMKALRAFRVLRP
LRLVSGVPSLQVVMNSILKAMLPLLHIALLVFLLVTIYAIMGLELFKCKMHKTCYYTGTN
IYSTAEGELPAPCAQAGNGRRCTINGSECRPGWEGPNNGITHFDNIGFAMLTVYQCITME
GWTKVLYWVNDAIGNEWPWLYFVPLILLGSFFVLNLVLGVLSGEFTKEREKARSRGEFQK
LRERQQLDEDLHGYMEWITHAEVLDADREGKGLLPLTSGDSDTDSLYGLEGKSRIIYYYR
LARRWNRFFRMKCLVYVKTKSFYWLVMFLVFLNTLTIATEHHHQPEWLTSLQDVASRVLL
VLFIIEMFIKMYALGLRAYFMSLFNRFDFFVVLCGILEMIMFSAGAVTPLGFSVLRCIRL
LRILKVTKYWTSLSNLVASLLNSVRSIASLLLLLFLFIVIFSLLGMQVFGGKFNFSDHRP
RRSNFDNFPQALISVFQILTGEEWTNIMYNGIMAYGGPVIPGILVSIYFIVLFVCGNYIL
LNVFLAIAVDNLAEAESLTSAQKEKAEEKMRRKLLRSKMPEKTDEERERIAKKLAEQRAK
IEGMPTTAKLKIDEFESNVNEVKDPFPPNDFPGDDEEVEPEIPISPRPRPMADLQLKEEA
VPLPEASSFFIFGPQNKFRKLCYKIINASSFTNLILLFILLSSISLAAEDPIDPKSYRNQ
ILAYADIVFTTVFTIEIVLKMTVYGAFMHKGSFCRNSFNILDLIVVGVSLLSMGMESSAI
SVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLNFMFACIGVQLF
KGKFYSCTDLSKVTHEECQGFFLKHMENSLQDTVLAERMWLNSDFNFDNVLYGMLALFTV
STIEGWPELLYRAIDSDKEDMGPVFNNRVDVSIFFIVYIILIAFFMMNIFVGFVIVTFQE
QGEQEYKDCELDKNQRQCVQYALKARPLRCYIPKNPYQYRVWYIVTSCYFEYLMFFLIML
NTLCLGMQHCNQSDHVTKISDMLNLIFTVLFTVEMILKLMAFKIKGYFGDPWNVFDFIIV
IGSVVDVILSEVDTALASSGGLYCLHGCADTNPMQAIADSENASVSITFFRLFRVMRLVK
LLNRSEGIRNLLWTFIKSFQALPHVALLIVMLFFIYAVIGMQIFGKVALLDGTQIHRNNN
FQTFPQAVLMLFRCATGEDWQEVMMASMYGKKCDPKSDFLPGEEYTCGSNFAVIYFLSFY
CLCAFLILNLFVAVIMDNFDYLTRDWSLLGPHHLDEFKKIWAEYDPEATGRIKHLDVVTL
LRRIQPPLGFGKFCPHRAACKRLVGMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEK
ANEELRAIIKQIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLLQDHFRKFLKCQEEYYG
YRPNKKSASGPEIQAGLRAIDDELVPEMHRTISGDLQNEEEMDRAMEAGEEGIYHRSHSL
FGHRVDEFSSDPANEHPQHVTNQRPLKFSDSQPEADLFTPTAPKNNSNNNAFAELTLERE
GSPGEFYHPVEDVETDDTPSWNLTVRTDRTQFPYVPDHLDSQSQSSSSAADRLVQEALVS
GGLASLAKDPNFVTQTKKEMAEAMRTTEDDMESVAQGILSQRCGPIPPAKKKRPVPVSPP
PAPDVAPRTSAPPDPAVRRKRRPVPIIPSSQGLPGSNSQV
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaacggagatccggcaaagccggtcatcatgaatgaagaggagctgaagagg
aagcagaaggagaagctgaagaagctacaggccacggggggcaaccctcgaccaacaagg
tccctcttcttcttcaccctcaaaaatcccttccgcaaggcctgcatcaacatcgtggag
tggaaagcctttgagattatcatcctgttgaccatctttgcaaactgtgtggctttagct
gtgttcttgcccatgcctgaagaagacagtaataacaccaatgcaagcctggagagtttg
gagtatatctttttggttattttcacattagagtgcttcttgaagatagtggcgtatggg
tttgtgtttcacgagggcgcctatttgcggaactgctggaacatactggactttgtcatc
gttttcatgggcctcttcaccttcgccttggataccatcaacaagatagcaggtgtgcca
ctggagaagggcggggggtttgacatgaaggccctgagagccttcagggtgctgcggccc
ttacgcctcgtctccggagtccccagcctgcaggtggtgatgaactccatcctcaaagcc
atgctgccgctgctgcacatcgccctgctcgtcttcctgctggtcaccatatatgccatc
atgggcctggagcttttcaaatgcaaaatgcacaaaacctgctattacactggcacaaat
atctactccacggcggaaggtgagctgccggcaccctgcgctcaggctggcaacggacgc
cgctgcaccatcaacgggtctgagtgtcggcccggctgggaggggcccaataacggcatc
acgcactttgacaacatcggcttcgccatgctgacggtctaccagtgcatcaccatggag
gggtggactaaagtactctactgggtgaatgatgccatcggaaatgaatggccctggctt
tactttgtccctctcattctgctgggttctttttttgtactcaacctggttctgggggtt
ctcagtggagagtttaccaaagaacgagagaaggcccggtcacgtggagagttccagaag
ctgcgagagcgtcagcagctggatgaagacctgcacggctacatggagtggatcactcac
gctgaagtcctggatgcagaccgtgaaggaaaaggactgctgcctttaaccagcggagac
tcggacacagacagtctttacggcctggaaggcaaaagccggatcatctactactatcgt
cttgcccgtcgctggaatcgtttcttcaggatgaagtgtctggtgtatgtgaaaaccaag
agcttttactggctggtgatgttcctggtcttcctcaacactctgaccatagccacagag
caccaccaccagcctgagtggctcacttccttacaagatgtggccagtcgtgtgctgctg
gtgctcttcatcatcgaaatgttcatcaagatgtacgcgctgggcctcagagcttacttc
atgtccttgttcaaccgctttgacttcttcgtggtgctgtgtggaatcctggagatgatc
atgttctcggctggagccgtgacgccgctggggttctctgtgcttaggtgcatccgattg
ctgaggatcctaaaggtcacaaagtactggacctcgttgagtaatctcgtggcttctctt
ctgaactccgtgcgctccatcgcctctctgctcctcctcctcttcctcttcattgtcatt
ttctcgctgctggggatgcaggtgtttgggggcaaattcaacttttctgatcacagaccc
aggcgcagcaactttgacaatttcccgcaggccctcatcagtgtgtttcagatcctgaca
ggagaggaatggacaaacatcatgtataatggaattatggcttacggagggcctgtgatt
ccaggcatcttggtctccatctactttatcgtcctctttgtctgtgggaactatatcctc
ctcaacgtgttcttggccatcgctgtggacaacctggccgaagcagagagtctcacttct
gctcagaaagaaaaggcagaggagaaaatgaggagaaaattactcaggtccaaaatgcca
gaaaagacagacgaggagagggagaggatagcaaagaaactggcagagcaacgagccaag
atagagggcatgcccaccacagctaaactcaaaatcgatgagtttgagtccaatgtcaat
gaagtgaaagatccgttcccgcctaatgacttcccaggagatgatgaggaggtagagcct
gaaattcccatcagccctcggcccagaccaatggccgacttgcagctgaaggaggaagct
gttccattgcctgaagccagctccttttttatttttggccctcaaaacaagttccgcaag
ctgtgttacaagatcataaatgcttcatccttcacaaacttaatcctcctcttcatcctg
ctgtcctccatctcgctggctgctgaggaccccattgacccaaaatcctacaggaaccag
attttggcttatgcagacattgtttttaccacagtcttcaccatcgagatcgttctgaag
atgacagtttatggagcattcatgcacaagggctccttctgccggaactccttcaacatc
ctggatctgattgtggtcggggtctccctgctttctatggggatggaatccagcgctatt
tccgtggtgaagattctcagggtgctgagggtgctgagacctctgagagccatcaacaga
gccaaggggttgaagcacgtggtccagtgcgtgttcgtggccatcaaaaccatcggcaac
atcgtcctggtcaccatgctgctgaatttcatgtttgcttgtatcggagtccaactcttc
aagggtaaattctacagctgcacagacttatccaaagtgacccatgaggaatgccagggg
ttcttcttaaagcacatggagaattctcttcaggacacggtgctggccgagaggatgtgg
ctcaacagcgacttcaactttgacaacgtgctctacggcatgctcgctctcttcactgtt
tccacaattgaaggctggccggagctgttgtaccgggccatcgattcagacaaagaggac
atgggccccgtctttaacaatcgtgtggatgtgtccatcttcttcatcgtctacatcatc
ctcatcgccttcttcatgatgaacatctttgtgggcttcgtcatcgtcactttccaggag
cagggtgagcaggagtataaagactgtgagctggacaagaaccagcgtcagtgtgtgcag
tatgccctgaaagctcgtcctctgaggtgctacatccccaaaaatccctaccagtacaga
gtctggtacattgtcacctcctgctacttcgagtacctcatgttcttcctgattatgctc
aacacgctctgtctgggcatgcagcactgcaaccagtcggaccatgtgaccaagatctca
gacatgctgaacttgatcttcacggtgctcttcaccgtggagatgattctcaaactcatg
gccttcaaaataaagggttactttggagacccctggaacgtctttgacttcatcatcgtc
attggcagcgtggtggatgtcatcctgagcgaagttgatactgccctggcctccagtggt
ggactgtactgtctccatggctgtgctgatacaaaccccatgcaagccatcgcggactct
gaaaatgcatcagtgtccatcacgttcttccgactcttccgtgtcatgcgtctggtcaag
ctgctcaaccgctcagagggaatccgtaacctgctgtggaccttcatcaagtctttccag
gcgctccctcatgttgctctgctcatcgtgatgctcttctttatctacgctgtcatcggg
atgcagatatttggaaaggtggccttactggacggcacccaaatccaccgcaacaacaac
ttccagacattccctcaggctgttctcatgttattccgatgtgccactggagaggactgg
caggaggtcatgatggcgtccatgtacggaaaaaagtgcgaccccaagtctgacttcctg
ccgggagaggaatacacctgtgggtccaactttgctgtcatctacttcctgagcttctac
tgtctgtgtgccttcctgatcctgaacctgtttgtcgctgtgatcatggacaactttgac
tacctgacgcgggactggtccctcctcggtccacaccatctggacgagtttaagaagatc
tgggcagaatatgaccccgaggccacggggagaattaaacacctggacgtggtcactttg
ctgcggcgcatccagcctccgcttggtttcggcaaattctgtcctcatcgagcagcatgc
aagcggctggtcggtatgaacatgcctctgaacagcgacggcacggtcaccttcaacgcc
accctctttgctctggtccggactgctctcaagatcaagactgaaggtaactttgagaag
gccaacgaggaactgcgggccatcataaagcagatctggaaacggaccagcatgaaactc
ctggatcaggtcatcccccctatcggagatgatgaggtgaccgtggggaaattctacgcc
accttccttcttcaggaccatttccggaagttcttgaagtgtcaggaggagtactacggc
taccgccccaataagaagagcgcgtcgggcccagagatccaggctggtctgagggccatc
gatgatgagctggttccagagatgcacagaactatttcaggggacctgcagaatgaggag
gagatggaccgagcgatggaggcaggagaagaaggcatttaccaccgatctcacagcctg
ttcggacaccgtgtggacgagttctcctccgatccagccaacgagcacccgcagcacgtg
accaaccagcggccgctcaagttctccgacagccaacccgaagctgatcttttcaccccg
acggcaccaaaaaacaacagcaacaacaacgccttcgccgagttgacacttgagagagag
ggcagcccgggagaattttatcatccggttgaagacgtagagacagacgacacaccctcc
tggaatctcacggtgaggacggacagaacacagtttccttatgtgcccgaccacctggac
agccagagtcagagctccagttctgccgccgaccggctcgtccaggaggctctggtgagc
gggggtctggcctctctggcgaaagaccccaactttgtgacccagaccaagaaggagatg
gcggaggccatgcgcacgaccgaggacgacatggagagcgtggcccagggcatcctcagc
caacgctgcggccccatcccgccggcaaaaaagaagcgtcccgttcccgtctctcctcct
ccggctcctgacgtggccccgcggacatccgccccgccagatccagccgtgaggagaaag
agacgcccagtacccataattccctcctcgcaggggttgcctgggtctaactcccaagta
tag
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integrated database retrieval system
