Takifugu flavidus (sansaifugu): 130529582
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Entry
130529582 CDS
T09160
Symbol
srsf6b
Name
(RefSeq) serine and arginine rich splicing factor 6b isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03040
Spliceosome
tfs05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130529582 (srsf6b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130529582 (srsf6b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfs03041
]
130529582 (srsf6b)
Spliceosome [BR:
tfs03041
]
Common components
Common spliceosomal components
SR proteins
130529582 (srsf6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_occluded
DbpA
Motif
Other DBs
NCBI-GeneID:
130529582
NCBI-ProteinID:
XP_056895944
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All DBs
Position
8:complement(5580547..5585091)
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AA seq
379 aa
AA seq
DB search
MPRVYIGRLSYHVREKDIQRFFSGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVIVEHARGPRRDRDFYGGGYGGGGRSSGYSSRSRTGRDKYGPPVRTEYRLVVENLS
SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSHSDMKRALDKLDGTDINGRKIRL
VEDRARRGRSDSGSRSRSRSRRRSRSRSHGSRRSRSSRSRSRSRSRSRSRSNKDRNHSRS
RSGRKSGESKSQPRRSRSGSHKSKSRSRSQKSRSRSQKSRSRSNERKSRSKSRSNSRSNV
KSQRDSRSRSKEMGCEKKPRSRSASPVQNGEREGVAKSASRSPSPQPDDRRSKSREKRSA
SRSASRSRSRSRSRSASRD
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcgtatacattggacgactgagctatcatgtccgcgaaaaagacattcaacga
tttttcagcggatatgggaagctgatggagatcgacctcaaaaacggatatggttttgtt
gaattcgaggacaaccgtgacgcggacgatgccgtgtacgagctgaacgggaaggagttg
tgcggagagcgggtgatcgtcgaacatgcccgtgggccgcgccgagaccgagacttctac
ggtgggggttacgggggtggcgggcgcagcagtggttacagcagccggagccgcaccggc
agggacaagtatggacctccggttcgcacagagtatcgccttgttgtggaaaacctatcc
agccgctgtagttggcaagatctcaaggacttcatgcgtcaagcaggggaagtgacttat
gccgatgcccataaggaacgcacaaacgagggcgttattgagtttcggtcgcactcggac
atgaagagggctctggataagttggacggtacggacatcaatggaaggaagattcggctg
gtggaggaccgagcccgcaggggaaggtctgactccggcagccgctccagatctcgaagt
cgccgccgctcccgcagcaggagccatggaagtcgcagaagcaggagctccagaagccgc
tccaggtcccgctctcggtctcgttctcgcagcaacaaggaccgcaaccattcccgctcg
aggtctggaaggaagtctggagaaagcaaatcacagcctcgcaggtcccgctccggatcc
cacaaatcaaagtcccgttcccgctcccagaagtcccgttcccgctcccagaagtcccgc
tcccgttcgaacgagcgcaagtcccgctcaaagagccgctcaaacagccgctcaaacgta
aagtctcagcgcgattcccgtagtagatccaaggagatgggctgcgaaaagaagccccgc
agtcgctcggcctccccagtgcagaacggggagagagaaggcgtcgccaagtctgcctct
cgctccccgtctccccagccagacgatcgcaggtccaagtcgagggagaagcgctccgcc
tctcgctccgcttcacgttcaaggtctcgctcacgatctagatcggcctctcgggattag
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