Takifugu flavidus (sansaifugu): 130529812
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Entry
130529812 CDS
T09160
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03250
Viral life cycle - HIV-1
tfs04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130529812 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
130529812 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130529812 (samhd1)
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130529812 (samhd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
PDEase_I
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
130529812
NCBI-ProteinID:
XP_056896389
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All DBs
Position
8:10142457..10147485
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AA seq
528 aa
AA seq
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MENRIGDVSTYKVFNDPIHGHIELHPLLIKIIDTPQFQRLRNIKQLGGTYFVFPGASHNR
FEHSIGVCHLAGQLVCSLKESQPELDISDSDCLCVQIAGLCHDLGHGPFSHMFDRRFIPK
AKPELNWQHEKASLDMFDHLVEANNLEPVMKQHGLTLPKDLDFIKEQIAGPLSNGASQNS
QSSSHWSYKGREKNKSFLYDIVANKKNGIDVDKWDYFARDCHHLGIQNIFDHQRFIKFAR
VIEVDGEKYICTRDKEVNNLYDMFHMRNCLHRRAYQHPVGNIIEIMITEAFLKADKHIKI
EGSGGRTFTLSTAIDDMEAYTKLTDQMFEQILNSSSPELAEPRKILHDITCRRLYKYLGQ
TQSEKTLEESEEELQAELAQTVPEIGANDVHLQQDDFVVNLINMDYGMKDQDPIENVRFY
CKDDLNKAFGIRKDQVSKLLPENFTEQMIRVYCKKTDDNSLKAAKNIFVQWCWKKGFSKP
KDGDVIAPDVTPLKLEWSSSKKSKDGERPSSAGDPSNLSARKKLKYDS
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagaatcggcgatgtttcgacatataaggtttttaatgaccccatccatggt
cacatcgagctgcaccctcttctcatcaaaatcatcgacaccccccagttccagagactg
cgaaacatcaagcagctcggagggacctactttgttttccccggagcgtcccacaaccgc
tttgaacacagcataggggtgtgccacctggcaggacaacttgtttgttctctgaaagag
agtcagccagaacttgacatctcggacagcgactgcctctgcgtgcagatagcagggctg
tgccacgacctgggtcacggtccattctcccacatgtttgatcgcaggttcatccctaaa
gcaaagcctgagctgaactggcagcatgagaaggcttctttagacatgtttgaccacctg
gttgaagccaacaacctggagccagtgatgaagcagcacgggctgacactgcccaaggac
ctggacttcatcaaggaacagattgctggaccactgagcaatggagcatcccagaacagc
cagtcatcctcccattggtcgtataaaggccgtgaaaagaacaagtccttcctctatgat
atcgtggccaacaagaaaaacggcatcgacgtggacaagtgggactactttgcaagggac
tgccaccacttgggcatccagaatatttttgaccatcaacgcttcattaaatttgccagg
gtgattgaggtggatggggagaagtacatctgcactagagacaaggaagtgaacaacctg
tatgacatgttccacatgagaaactgcctccaccgaagagcctaccagcacccggtgggc
aacatcatcgagatcatgatcacggaggcctttctgaaagcagacaaacacatcaagatt
gaaggatcgggggggagaacattcactctgtccacagccatagatgacatggaagcctac
accaagctaacagatcaaatgtttgagcaaatactgaactcttcttccccggaactggcc
gaaccaaggaagattcttcatgacatcacttgccgacgcctctacaagtatttgggccaa
acacagtcagaaaaaacccttgaagagtcagaggaggaacttcaagctgagttggctcaa
actgttccagagattggtgccaacgatgttcatctgcaacaagacgactttgtagtcaat
ctgattaatatggactacggcatgaaggatcaggaccccatcgaaaatgtgcgtttctac
tgcaaagatgacctgaacaaggccttcgggattcgcaaggaccaggtgtctaaacttctt
ccagagaactttactgagcagatgatcagggtctactgcaagaagactgatgacaacagc
ctaaaagcagccaagaatatatttgtccagtggtgttggaagaagggattctccaagccg
aaggacggggacgtgatcgcaccggacgtgacgcctctgaagctcgaatggtccagcagc
aaaaaaagcaaagacggggagcgtcccagcagcgctggagacccgagcaacctaagtgcg
cgaaaaaagctgaaatatgactcctga
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