Takifugu flavidus (sansaifugu): 130529820
Help
Entry
130529820 CDS
T09160
Symbol
usp19
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 19
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tfs01002
]
130529820 (usp19)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130529820 (usp19)
Enzymes [BR:
tfs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130529820 (usp19)
Peptidases and inhibitors [BR:
tfs01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130529820 (usp19)
Ubiquitin system [BR:
tfs04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130529820 (usp19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP19_linker
UCH_1
CS
zf-MYND
USP7_C2
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
130529820
NCBI-ProteinID:
XP_056896412
LinkDB
All DBs
Position
8:1806368..1822758
Genome browser
AA seq
1495 aa
AA seq
DB search
MSSNGGNGAMGRHGGSHQRRGNGREAGSDLSSCTSKKKQKDRANQESREAKRTVAVVDGV
TAEIKKDVFVDWKQNVNEVTVRLRCGDGIQRKEDVDTSFTDKSCHVSFPDGRHWSCLLQE
EIEASCSRVLYKEKGGFLHVIMQKKIPFHIWPSLKSNKKKEAVSTENKSNKEVEKSVSAE
LMEKASISSSQPQPPSSHKHSESRQSFAKDGTVSKCSLNKASTKSVHKTEDGSDTVKTVI
VRKDEQKPHEPSTTCTVVQPAKNKRTVDDEETPLGGKGDHTHLISGKGPEVQQKNEDVIL
GSGQKQIPGVTFDVASHKPERKETQNQSLSGSQENQSSKESRAAPHQSDGHSAAAKSTDS
VSKHACLSNEMSSTSTDMLGNGTGVTPDSHNDHKTGLFVRNCHTPSVVGKPTGSGHVANL
TLNLGRYNNEEKQDQSKDEPLPELRQEEGCESLEPMVDLQYVKNDSYEKGTDLMVVNVYM
KGISRDTARVIFREQDFTLFFQTSDGNFLRLHSDCGPNTHFKWQVKLRNLIQPDQCTYSF
TPSRLDITLKKRHSQRWGGLEAPASQGLHLNSAVGGAKVAVPSTPTCMEKAQPDSSKHSL
PAKQEPPRVKEDKPKVSKTSPRVEDGSLDPTPCTVSEHVAITKTETTFTMPKPTCMVQPM
THALPTSKDHHEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDYFLDRGFEA
EINCSNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEF
MAFLLDGLHEDLNRIQNKPYTETVDSDGRLDEVVADEAWQRHKMRNDSFIVDLFQGQFKS
KLVCPMCSKVSITFDPFLYLPVPLPQKQKVLSVYYFAKEPHKKPIKFSVSVSKENSRTAE
VLESISRNVRVKPENLRLAEVGKNRFQRMFLPSHSLDTVTSTDMLFCFELLSKEMAKERV
VFLRVQQKLQVPNIPISKCAACQKPPVSEEDKLKRCTRCYRVGYCNQVCQRTHWPNHKSL
CRPNTENVGLPFLVSVPESRLSYARLTQLLEGYSRFSVDVFQPPFHSGRTSPETSRAGDL
APLPTSTTHTSDLGFFEHFSSVSCCSFDPNAEKETSCEKTARPEAAVTGYQHPSELTSAH
ASQFFISLLDSNSKEQRLDEKEDALANXPEDATLELVWKNNERLKEYVLVSSKDLDYEED
PSSLSETARAGHFSLEQCLNLFTKPEVLAPEEAWYCPKCQQHREASKQLLLWRLPNVLII
QLKRFSFRSFIWRDKINDMVDFPIRNLDLSKFCIGMKDEMQQPPIYDLYAVINHYGGMIG
GHYTAYARLPSDKNSQRSDVGWRLFDDSTVTMVDESQVVTRYAYVLFYRRRNSPVERQAH
FHRPGAAESPTAAGAAASQASLIWRELEEEEEGLNEGSSRLFHSALWRRQVQQNKDQDDK
DIAEVSLQQPHRRRISDYPNDDCGHFFVLGTLAALFALFINLVYPLLWKLDLRGG
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaatggtggtaatggtgctatgggccgccatggtgggtcacaccagagacga
ggcaatggcagggaggcgggctccgatctgtcctcctgtaccagtaaaaagaagcagaaa
gaccgggctaatcaggagagcagagaggccaagcggacggttgccgtggtggatggagta
actgcagagatcaaaaaagacgtctttgtggattggaagcagaatgtcaatgaagtcact
gtcaggttgcgctgtggggatggaatacagagaaaagaggatgttgacacaagtttcact
gataaaagctgccatgtgtctttcccagatggacgccactggagttgcctgctgcaggag
gaaatagaggcctcctgtagtagagttctgtacaaagagaagggaggtttccttcatgtc
atcatgcagaagaagattccttttcacatttggccctcacttaagtcaaacaagaagaag
gaggctgtaagcacagagaacaaaagcaacaaagaagtagagaaatcggtctctgcggaa
ttgatggagaaagccagcatatcctcctcacagccccaacctccatcctctcacaaacat
agtgagtctagacagagctttgctaaagatggcacagttagcaagtgcagcttgaacaaa
gcctctacaaagtctgtacacaaaacagaagatggatcagacaccgtgaagacagttatt
gtccgaaaagatgagcagaagcctcatgagcccagcaccacatgtacggtcgtacagcca
gccaaaaacaagcggactgtggatgatgaagaaacaccccttggtggtaaaggtgaccac
acccacctgatttctggtaaaggcccagaggtgcagcaaaaaaatgaagacgtgatcttg
ggcagtggccagaagcagatccctggagtcacctttgatgttgcaagtcacaaacctgag
agaaaagagacacaaaaccaatctttgagtggatctcaagaaaaccagtcttcaaaagaa
tctcgagcagcacctcatcagagcgacggccactctgctgctgccaaaagcaccgatagt
gtctccaaacatgcctgcctcagcaacgagatgtcttcaacttcaacagacatgctggga
aatgggactggcgttaccccggacagtcataatgaccacaaaacaggactgtttgttagg
aattgtcacacaccttctgttgtcggaaaacctactggaagtggtcatgtagctaatttg
accctgaatctgggccgttataataacgaggagaaacaggaccagtcaaaggatgagcct
ctaccggaattaaggcaagaagaaggttgtgaatctctggagccaatggtggacttgcag
tatgtaaagaatgattcctatgagaaaggcacagacctgatggtggtaaatgtttacatg
aagggcatctccagggacactgcaagggtcattttcagggaacaggattttacgctcttt
ttccagacgagtgatggtaatttcttgcggcttcattcagactgtgggccaaatacacac
tttaagtggcaggtaaaactcaggaacctgatacagcctgaccagtgcacctactctttc
actccgtcacggctcgacataacactgaagaagagacacagtcagcgctggggtggtctg
gaagcccctgcctcacaaggtctacatttaaacagtgcagtgggtggtgccaaagtggcc
gtgccttccacccctacctgtatggagaaagcccagccagacagcagcaaacacagtcta
cctgctaagcaggagcctccgagagtcaaggaagataaaccaaaagtctctaagacgtcc
cccagagtcgaggatggcagccttgatcctactccttgtactgtttctgaacatgttgcc
attacaaagaccgagacaacctttactatgcctaaacccacctgcatggtgcagcctatg
acccacgcccttcctacaagcaaggatcaccatgaagaagaggaggagaagaaagtgtgt
ctgcctggcttcactggattggtcaacctcggcaacacctgtttcatgaacagcgtcatc
cagtccctgtctaacaccagagaactcagggattacttccttgaccggggatttgaagca
gaaattaactgcagtaatccactaggaacaggtggaagattagccattggctttgctgtg
ctactcagggccctttggaaaggaacgcatcatgccttccaaccctcaaaactaaaggct
attgtggcaagtaaagccagtcagtttacaggttatgcccagcatgatgcccaggagttc
atggctttcttactagatggcctccatgaggacttgaaccgcatccagaataaaccttat
acagaaacggttgactctgatggaagactagatgaggtggttgcagacgaggcctggcag
aggcacaagatgagaaatgactcatttatagtggatctcttccaaggccagtttaaatcc
aagcttgtgtgccccatgtgctccaaggtttcaatcacctttgaccctttcctctaccta
cctgtacccttgccccagaaacaaaaggtgctgtctgtttattattttgctaaagaacct
cacaaaaagcccatcaagttctcggtgagcgtgagcaaagagaattcgcgcaccgctgaa
gtccttgaatctatctccaggaatgtccgagtcaaaccagagaacctgagattggcagag
gtgggaaagaaccgattccagcgcatgtttctgccatcccattccctggacacagtgact
tctaccgatatgttattctgctttgagctgctctccaaagaaatggccaaagagagagtg
gtgtttctcagagtgcagcagaagctgcaggttcccaacatccccatctcaaagtgtgct
gcctgccagaagcctccagtgtctgaggaagacaagctgaagcgctgcactcgctgctac
cgtgtgggctattgcaatcaagtttgtcagcggacccattggccaaatcacaagagtttg
tgtcgacccaacaccgagaacgtaggcctgccgtttctagtcagcgtgcctgagtcccga
ctttcctatgcccgtctgacacagctgctagaaggttactccagattttctgtcgacgtg
ttccagcccccttttcattcaggaaggacatcccctgaaacgtctcgtgcaggtgacctc
gccccactgcctacctcaaccacgcacacatcagatttaggattctttgagcacttctct
tcagtttcctgttgctctttcgatcccaatgctgagaaagaaacgtcctgtgagaagacg
gcacgaccagaagctgcagtaacaggttatcagcatccaagtgagctgacatctgctcat
gccagtcagttcttcatatctctgctggactctaacagtaaggaacagagactggacgag
aaagaggatgctttggccaacnctcctgaggatgcaacattggagctagtgtggaagaac
aatgagcgtttgaaggaatacgttcttgtgagctcaaaagatcttgattatgaagaggac
cccagctccttgagtgagacagccagagcgggacatttcagcctggaacagtgtcttaac
cttttcaccaagccagaggtgttggcaccagaggaggcatggtactgtccaaaatgtcag
caacaccgagaagcttccaagcagctgctgctttggcgtttgccaaatgtgcttattatc
cagctcaagcgcttttccttcaggagttttatttggagggacaagatcaatgacatggtt
gactttcccatccggaacctggacctgagcaagttctgtatcggcatgaaggatgagatg
cagcagcctcctatttatgacttgtatgcagtcatcaatcactacggagggatgattggg
ggccactacacggcctacgctcggctgccaagcgacaagaatagtcagcgcagcgatgtt
ggctggcgcctgtttgatgacagcaccgtcacgatggtggacgagagtcaggtggtgacc
cgctacgcgtatgtccttttctacagacgccgaaactcccccgtagagaggcaggctcac
ttccacaggcctggagcagcagagtctcccacagctgcaggagctgctgccagtcaggcc
tctctaatatggcgggaactagaggaggaagaggagggacttaatgaaggttcttccagg
ctgttccattctgctctgtggaggaggcaggtgcagcaaaacaaggaccaggacgataaa
gacatagctgaagtgtcattgcagcagccacacaggaggaggatctcggactaccccaat
gatgactgtggccatttttttgttcttggaaccttggcagctctatttgctctctttatc
aatttggtctaccctcttctctggaaattagacttgagaggtggctaa
DBGET
integrated database retrieval system
