Takifugu flavidus (sansaifugu): 130530046
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Entry
130530046 CDS
T09160
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
130530046 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfs03036
]
130530046 (mbd4)
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130530046 (mbd4)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
130530046 (mbd4)
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
130530046 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
130530046
NCBI-ProteinID:
XP_056896890
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All DBs
Position
8:11601164..11603789
Genome browser
AA seq
441 aa
AA seq
DB search
MQLETKSKGNNSKDVDRLCDTSIMPPGWIREVRQRKTGKTAGKLDVYIISPQGLKFRSKT
SLQAFLLKNGREDLNINLFNFSASKDDEVIAPFKAMQKRRKEKEQQYNAPEESKSPLNTS
ASTCYALRSTVHAVNDSGDSDHIVPEKMQKISSASCTVDDVAQQKRPHRAGLLREKILRL
VPNQQNACKEKQAGSLSVPTLNLEPPAEGENKSEDVQGGKERQVDSRGGNESDSEHDAGA
NSVETEVLSPKISGGSCAQVADSQNKSKNAEDKRKTSPYFTRKLRKNVLSPPRRKAFKKW
TPPRSPYNLVQETLFHDPWKLLVATIFLNKTSGKMAIPTLWQFFERYPSAEVTRGAEWKP
MSELMKPLGLYELRAKALIRFSEEYLTKQWRYPVELHGIGKYGNDSYRIFCLGEWREVTP
EDHMLNKYHAWLWENHATLGI
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcagctggagaccaagagcaagggaaataattccaaggatgtggatcgtttatgcgat
acttccataatgcctcctggctggatcagagaggtgaggcagaggaaaactggcaagaca
gcgggcaaactggacgtctacataataagtccccagggcctgaagttccggtcaaagaca
tccctgcaagctttcctcttaaaaaatggacgagaggacttaaacataaacctttttaat
ttttctgcttccaaagatgatgaagtcattgcccctttcaaagcgatgcagaaaagaaga
aaggagaaggaacaacagtataatgcaccagaagaatccaaatcacctttaaatacatcg
gcgagcacttgttatgcactcagatctacagtccacgcagtaaatgattctggtgattca
gaccatattgtaccagagaaaatgcagaagatatcgtcggcttcatgcacagtggatgat
gttgcacagcagaaaagacctcacagggcaggtttgctgagagagaagatactcagatta
gttcctaaccaacaaaatgcttgcaaagaaaagcaagcaggctcactttcagtcccgact
ctgaaccttgaacctcctgctgagggtgagaataagagcgaggatgtacaaggcggaaaa
gagagacaggttgacagcagaggtggcaacgagtccgattcagaacacgacgccggtgct
aacagtgtagaaacggaggtgttgtcacctaaaatcagtggtgggagctgcgcacaggtg
gcagattcccagaataagtccaagaatgcggaagacaagcggaaaacaagcccttatttc
accagaaaactccgcaaaaatgtcctcagcccacccagaaggaaggcattcaagaagtgg
acccctccccgctctccctacaacctagtacaggaaaccctttttcacgatccatggaag
ctcctggtggccacgattttccttaataaaaccagtggtaagatggccatccccacactg
tggcagttctttgagcgctacccctctgcagaggtaacccgcggagccgagtggaagccc
atgtctgagctgatgaagccgctgggcctgtatgagctcagggccaaagcactcatccgt
ttctcagaagaatatctgactaaacagtggcgttacccggtcgagcttcacggcattggc
aagtacggcaacgactcctacaggatcttctgtttgggagaatggagagaggtgacccct
gaagaccacatgttaaacaaataccacgcctggttgtgggagaaccacgccacactcgga
atctaa
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