Takifugu flavidus (sansaifugu): 130530242
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Entry
130530242 CDS
T09160
Name
(RefSeq) tripartite motif-containing protein 54-like
KO
K10654
tripartite motif-containing protein 55
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130530242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130530242
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130530242
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
TRIM_CC
zf-B_box
zf-RING_5
zf-C3HC4_4
DUF4618
CoiA_N
zf-C3HC4_3
zf-RING_2
DUF8512
DUF4936
zf-RING_6
bZIP_1
IF-2B
DUF7560
Lpg1689
CRLF3_N
ANCHR-like_BBOX
Sina_RING
ADK_lid
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
130530242
NCBI-ProteinID:
XP_056897234
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All DBs
Position
8:1398301..1409693
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AA seq
424 aa
AA seq
DB search
MSEPAEPTSLQDGGSRGSAEGGPAVTMLHKHLICPICHEVFNKPVVILPCQHNLCRKCAN
QLYQPSLFQARTTMTVNSGHFRCPSCRQEVVLDRHGVYGLQRNLLVESIIDIYNQEISNN
ISCVPSPVSPDQPLRCSIHKTERVNIYCLTCGLLTCSLCKVFGAHQSCQVAPLSHICQQK
KDELHDHVASLTELNHKIQSVIKQLEDTCASVTESSDLQKQRVCDKFQQVFSILEERQQV
MTQQLKSEQEEKTSRIQALMRCYENHVEANRKLLEQASHSIKEEDLVTFVQSSRELIAKV
TEASHRLPPESLEPAAERLTEYRYNFSRQERALRSISFHKEQVPQEQQQTFSEEPCIHNI
QPKHHQDSALEPTPEVIFPKYPGPGLCWRSSCSNLPPRRTTYIRPRGSTSGYTCGNSKKG
SGLL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagccagcggagccgaccagcctgcaggatggaggcagcaggggcagcgcagag
ggaggcccagcagtcacaatgctgcacaaacatctcatctgtcccatctgtcatgaggtc
ttcaacaaacctgtggtcattctgccatgtcagcataatctttgcaggaaatgtgccaac
cagctctaccagccttctttgttccaggctcgcacaaccatgacagtcaacagtggacac
ttccgctgtccgtcctgcagacaggaagtggtgctggaccgccatggggtctatggtctg
cagagaaacctgcttgtggagagcatcattgacatctacaaccaagaaattagcaataac
atcagctgcgtcccctcgcccgtgtctcccgatcagccgctcagatgttccatccacaag
actgagagggtgaacatctactgcctcacctgtggccttctcacctgttccctgtgtaaa
gtgtttggagctcaccagtcctgccaggtagcgccgctgtcacatatctgccaacagaaa
aaggatgagctacatgatcatgtcgcgtctctgactgagctcaaccacaaaatccagtcg
gtgatcaagcagctggaggatacctgcgccagcgtcacggaaagtagtgaccttcaaaaa
cagagagtgtgtgacaagtttcaacaggtgttttcaatcctggaggaaagacaacaggtg
atgacgcaacaactcaagagtgagcaggaagaaaagacaagccgcatccaggcattgatg
cgttgctatgaaaaccatgttgaggcaaacaggaagttgttggagcaggcctctcacagc
attaaggaagaggacctggtcaccttcgtccagagttcaagagagctcattgcaaaagtc
acagaagcaagccaccgtttgccccctgaaagcctggaaccagctgctgagcgtttgact
gagtatagatacaacttcagcagacaggaacgggccctgaggagcatcagcttccacaaa
gaacaagttccccaagaacaacagcaaacattctcagaagaaccctgcatccacaacatc
cagcccaaacaccaccaggactctgctctagagccaaccccagaagtgattttccccaaa
tacccaggacctggactctgctggagaagcagctgcagtaatctcccccccagaaggacc
acctacattagaccaagaggcagtacctctggatatacctgtggaaactccaagaaaggt
tctggccttctctga
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