Takifugu flavidus (sansaifugu): 130530242
Help
Entry
130530242 CDS
T09160
Name
(RefSeq) tripartite motif-containing protein 54-like
KO
K10654
tripartite motif-containing protein 55
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130530242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130530242
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130530242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-C3HC4_4
DUF4618
zf-C3HC4_3
zf-RING_2
DUF4936
zf-RING_6
bZIP_1
IF-2B
DUF7560
ANCHR-like_BBOX
ADK_lid
Sina_RING
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
130530242
NCBI-ProteinID:
XP_056897234
LinkDB
All DBs
Position
8:1398301..1409693
Genome browser
AA seq
424 aa
AA seq
DB search
MSEPAEPTSLQDGGSRGSAEGGPAVTMLHKHLICPICHEVFNKPVVILPCQHNLCRKCAN
QLYQPSLFQARTTMTVNSGHFRCPSCRQEVVLDRHGVYGLQRNLLVESIIDIYNQEISNN
ISCVPSPVSPDQPLRCSIHKTERVNIYCLTCGLLTCSLCKVFGAHQSCQVAPLSHICQQK
KDELHDHVASLTELNHKIQSVIKQLEDTCASVTESSDLQKQRVCDKFQQVFSILEERQQV
MTQQLKSEQEEKTSRIQALMRCYENHVEANRKLLEQASHSIKEEDLVTFVQSSRELIAKV
TEASHRLPPESLEPAAERLTEYRYNFSRQERALRSISFHKEQVPQEQQQTFSEEPCIHNI
QPKHHQDSALEPTPEVIFPKYPGPGLCWRSSCSNLPPRRTTYIRPRGSTSGYTCGNSKKG
SGLL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagccagcggagccgaccagcctgcaggatggaggcagcaggggcagcgcagag
ggaggcccagcagtcacaatgctgcacaaacatctcatctgtcccatctgtcatgaggtc
ttcaacaaacctgtggtcattctgccatgtcagcataatctttgcaggaaatgtgccaac
cagctctaccagccttctttgttccaggctcgcacaaccatgacagtcaacagtggacac
ttccgctgtccgtcctgcagacaggaagtggtgctggaccgccatggggtctatggtctg
cagagaaacctgcttgtggagagcatcattgacatctacaaccaagaaattagcaataac
atcagctgcgtcccctcgcccgtgtctcccgatcagccgctcagatgttccatccacaag
actgagagggtgaacatctactgcctcacctgtggccttctcacctgttccctgtgtaaa
gtgtttggagctcaccagtcctgccaggtagcgccgctgtcacatatctgccaacagaaa
aaggatgagctacatgatcatgtcgcgtctctgactgagctcaaccacaaaatccagtcg
gtgatcaagcagctggaggatacctgcgccagcgtcacggaaagtagtgaccttcaaaaa
cagagagtgtgtgacaagtttcaacaggtgttttcaatcctggaggaaagacaacaggtg
atgacgcaacaactcaagagtgagcaggaagaaaagacaagccgcatccaggcattgatg
cgttgctatgaaaaccatgttgaggcaaacaggaagttgttggagcaggcctctcacagc
attaaggaagaggacctggtcaccttcgtccagagttcaagagagctcattgcaaaagtc
acagaagcaagccaccgtttgccccctgaaagcctggaaccagctgctgagcgtttgact
gagtatagatacaacttcagcagacaggaacgggccctgaggagcatcagcttccacaaa
gaacaagttccccaagaacaacagcaaacattctcagaagaaccctgcatccacaacatc
cagcccaaacaccaccaggactctgctctagagccaaccccagaagtgattttccccaaa
tacccaggacctggactctgctggagaagcagctgcagtaatctcccccccagaaggacc
acctacattagaccaagaggcagtacctctggatatacctgtggaaactccaagaaaggt
tctggccttctctga
DBGET
integrated database retrieval system
