Takifugu flavidus (sansaifugu): 130530288
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Entry
130530288 CDS
T09160
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tfs01009
]
130530288 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130530288 (hdac6)
04131 Membrane trafficking [BR:
tfs04131
]
130530288 (hdac6)
03036 Chromosome and associated proteins [BR:
tfs03036
]
130530288 (hdac6)
Enzymes [BR:
tfs01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
130530288 (hdac6)
Protein phosphatases and associated proteins [BR:
tfs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130530288 (hdac6)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
130530288 (hdac6)
Membrane trafficking [BR:
tfs04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
130530288 (hdac6)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
130530288 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
130530288
NCBI-ProteinID:
XP_056897299
LinkDB
All DBs
Position
8:complement(218256..226229)
Genome browser
AA seq
1096 aa
AA seq
DB search
MDSGDPPDSGPKPIRRSPRLLPQCSNVSVKGRKKGESSLQEVKRRGRMERSREEEEDLDD
SLKTLNLSSGPSASGTGLVFSEIFTHHENLWDSSHPERPERVASIMEHLEQQDLLSRVTR
VQPREATEKELLLCHSQHYVDLMKSTQTMTEEELHSLSDKYDSIYLHPESFSVAVMAVGS
VLQLVDQVMTSELRNGFAVVRPPGHHAQKDLPNGFSIFNNVAIAARYAQTRHSVSRVLIV
DWDVHHGQGIQYLFQEDPSVLYFSVHRFEQGSFWPHLPESDSHFVGSSGAEGSNINLPWN
KTGMKDADYIAAFQQLLLPVAHEFQPQLVLVCAGFDAAAGDEKGQMCVRPQCFHILTHML
MSLAEGRLVLALEGGYNLQSTAEGTAACVRALLGGACPPLATPTAPSDSALRSISQTLSA
LFPYWPSLQILEGGPWSTDGVLRTTSAEHTAELSSHAPSVATATGLVYDERMMEHLNLWD
RHHPEQPQRISKIFSQHQKLGLVDRCRSIPARLATEEELCMCHSVQHVHQMRATATMKPR
ELHKLGDEFNSIYINNQSFQAALLAAGGCFSGVEQILAGQVRNGVAIVRPPGHHAERDFP
CGFCFFNTAALAARHAQKLSQDTPLRVLILDWDVHHGNGTQHMFEDDDSVLYISLHRYDN
GAFFPSSEDAAPDRVGVAKGVGYNVNVAWSRGRMGDSDYLAAFHHVVMPVATEFNPDLVL
VSAGFDAARGDPLGGYHVTPEGYAHLTHQLMSLAGGRLLLILEGGYNLSSISKSMAMCTS
VLLGDPPPALLTPLPPPHHSAVATINEVIRCHAPYWRSLRIHIPESVRASLPSPKDHGKR
SSRGKGRKSEETRRDKPPMSPPGQRGTLVDQSLEALTRGLASLDITQTAASPSPATSTPV
GGARPKVHRSPQMLTCDQEVKVESREQSCSAPRSQPEAQAAVQLAATGSGSAGGAGPGPE
AEGACGGSASQHSMELTRGGQINALYVVDPLPWCPHLDAVKPLPPSGVDIFKPCQDCGSE
VENWICLTCYQVFCGRYVNEHMVTHGVVAEHPVVLSFSDLSVWCYLCEAYIHNQILFEAK
NSAHWAKFGEEMPSWS
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggattcaggagaccctccagattctggaccaaagccaatcagaaggtccccccgtctg
ctacctcagtgcagcaacgtaagtgtgaagggacgcaagaagggagaaagcagcctacag
gaggtgaagaggagaggaagaatggagcggagcagagaggaagaggaagacttggacgac
agcctgaagacgctgaatctgtccagtgggccatcagccagtggaacgggtctggtgttc
tcggagatcttcactcaccatgagaacctctgggattccagtcatccggagagacccgag
agagtggcgtccatcatggagcacctggagcaacaggacctgctgtcacgggtcaccagg
gtgcagcccagagaagctacagaaaaagagctgctactctgccacagccaacattatgtg
gatttgatgaagtcgactcagaccatgacggaggaggagctgcacagcctgtcggacaaa
tacgactcaatctaccttcatccggagtctttctccgtggccgtgatggcggtgggttcg
gtgctgcagctggttgaccaggtcatgacctccgaactcaggaatgggttcgctgtggtc
agacctcctggccatcacgctcagaaggaccttccaaacggtttctcgatcttcaataat
gtggcgatcgcagctcgatacgctcagaccagacactcagtgagcagggtgttgatagtg
gactgggatgttcatcacggacagggcatccagtacctgttccaggaggaccccagtgtg
ctgtacttcagtgtgcacaggttcgagcagggctccttctggccccaccttccagagtcc
gacagccattttgttggatcttcaggagctgaaggcagcaacatcaacctgccctggaac
aagacggggatgaaggatgctgattacatcgcagcgttccagcaactgctgctgccagtc
gctcacgaatttcagcctcagctggttttggtctgtgctggatttgatgcagcagctgga
gatgagaaggggcagatgtgtgtgcggcctcagtgtttccacatcctcactcacatgttg
atgagtttggccgaaggtcgacttgttctggctctcgagggaggatataaccttcagtca
acagcagagggcactgcagcgtgtgttcgagctctgctgggaggagcctgtcctcctctg
gccacgcccacagccccttctgacagtgctttgcggtccatctctcagactctctcagcc
ctgttcccatattggccttctctgcagatactggaaggtggcccctggtccacagacggt
gtcctgagaacaacaagtgctgaacacacagcagagctcagtagccacgcaccctctgtt
gccacagcaacaggcctggtttatgatgagcgcatgatggagcacctgaacctgtgggac
agacatcaccccgaacaaccacagaggatctctaagatcttctcccaacatcagaagctg
ggactggtggaccggtgccgatccatcccagcgcgcttagcaacggaggaggagctgtgc
atgtgtcacagtgtgcagcacgtccaccagatgcgtgccacagccaccatgaagcccaga
gagctgcacaaactgggagacgagttcaactccatatacatcaacaaccagagcttccag
gctgctctgctggctgctggaggctgcttcagcggcgtggagcagatcctggcgggacag
gtgaggaacggcgtggccattgttcggccgccaggtcaccacgcagagagagattttccc
tgcggcttctgtttcttcaacacggcggctctcgctgctcgccacgcccagaaactgtcc
caggatacaccgctgcgcgtccttattctagactgggacgttcaccacggcaacgggacg
cagcacatgtttgaggacgatgacagtgtcctgtacatctctcttcatcgctacgacaac
ggggctttctttccatcttccgaggatgccgcccctgaccgagtgggcgtggccaagggg
gtggggtataatgtcaacgtggcgtggagcagaggacggatgggtgactctgactacctc
gctgccttccaccatgtggtcatgcctgtggccaccgagtttaaccccgacctggttctt
gtgtctgctggctttgacgcagctcgtggggacccactgggggggtatcatgtgactccg
gagggttacgcacacctgacccaccagctgatgtcactggctggggggcggctcctgctc
attctggagggaggttataatttatcatccatctctaaatccatggcaatgtgcaccagc
gtgttgctgggtgaccctcctccggctttgctcacacccctcccacccccccatcacagc
gccgtggcaacaatcaatgaggtcatccgatgccacgccccctactggcggtcactgagg
atccacatcccagagtccgtgcgggcctccctgccgtctccaaaggatcatgggaaacgt
agttccagaggaaaaggcagaaagtcagaggagaccagaagggacaaacctccaatgtcc
ccaccaggacagcggggcactttggtggaccaaagtctggaggcactgacgcggggactt
gccagcttggacatcactcagaccgcagccagtccctctccagctacgtccaccccagta
ggaggggccaggccgaaggtccaccgtagcccacagatgctcacctgtgatcaggaggtg
aaggtggagtcacgggagcagagctgctcagcaccgaggtcccagccagaggctcaggct
gcagtccagctggctgccactggaagtgggtctgctggtggagctgggccgggtccagag
gcagagggtgcctgtggcgggtcggcctcgcagcactctatggagctcacgcgtggagga
caaatcaatgcgctgtatgtggtggaccctctgccctggtgtccccacctggatgccgta
aagccgcttcctccctctggtgttgatatctttaaaccctgtcaggactgtggttctgaa
gtcgagaactggatctgcctcacctgctaccaggtcttctgtggccgctacgtgaacgag
cacatggtgactcacggcgtggtggcggaacaccctgtggtgctgagcttttcggacctg
tcggtgtggtgctacctgtgcgaggcctacattcacaaccagattctatttgaagcaaaa
aacagtgctcactgggccaagtttggagaggagatgccttcctggagctaa
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integrated database retrieval system
