KEGG   Takifugu flavidus (sansaifugu): 130530304
Entry
130530304         CDS       T09160                                 
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain
  KO
K06237  collagen type IV alpha
Organism
tfs  Takifugu flavidus (sansaifugu)
Pathway
tfs04382  Cornified envelope formation
tfs04510  Focal adhesion
tfs04512  ECM-receptor interaction
tfs04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    130530304 (col4a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130530304 (col4a2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    130530304 (col4a2)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    130530304 (col4a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tfs04147]
    130530304 (col4a2)
   00536 Glycosaminoglycan binding proteins [BR:tfs00536]
    130530304 (col4a2)
Exosome [BR:tfs04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   130530304 (col4a2)
Glycosaminoglycan binding proteins [BR:tfs00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   130530304 (col4a2)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 130530304
NCBI-ProteinID: XP_056897346
LinkDB
Position
1:11781834..11822549
AA seq 1664 aa
MNLTDYRFLLLCVFGAILAIQVHAGGKKHSGPCGGRDCSGGCKCFPEKGARGQPGPLGPQ
GDRGPPGQPGDPGIHGPKGQKGDRGRTGIFGPKGNVGLTGVPGFSGSNGIPGHPGQGGPR
GKPGADGCNGTNGEPGLDGIPGRNGRPGFSGQPGRKGEKGDTLELHVYMERFRGDFGAPG
SNGILGPPGFPGLQGNRGTSGPKGPPGDPGPRGQKGTMVNVLKGVKGDQGDIGPAGPPGN
ATYPQIRGLLGYRGQKGLKGERGDRADNKGETGVMGFSGARGPPGAEGSPGIKGDLGETG
PTGQGGIKGSRGEPGELISSGTSWPWSSVAGPEGPPGEQGPQGERGPVGDQGFPGPPGLP
ASAAQHQVWDFMGPFGFKGEEGEKGPRGEPGLPALFAGPKGSTGRPGNPGPPGPKGTWED
WYKGAAGARGRPGRPGSKGLKGDNGQCECAIVNAPPGLPGPAGEKGGAGMTGEFGKKGDV
GDPGPQGEDGSPGFPGVIGLSGPKGRKGEYSVAKQKGYQGDPGDPGLNREHGAAGEPGSI
GLPGFPGSPGSPGEATQGQHGDKGFQGLPGQPGAAGLRGEPGEDFRGVKGQRGLPGDAGL
PGYEGVAGTPGSPGGCSPTEGEGQVDVTGPCDAIPGRPGPPGYPGPLGLPGFIGPSGEKG
FKGQPGARGEKGEMGEQGIGGKPGPPGFPGPRGDRGLPGIHGSIGVPGFDGLPGRQGFKG
EKGAHGEVLGASPGPHGDQGLPGIRGSKGPSGDSGAQGYQGMDGMPGMTGFKGQHGPLGL
QGEQGRPGPPGIYGYPGDPGRAGPPGPLGAVGQPGFTGERGTEGEPGSPGPMGRKGTPGA
YGDDGPIGESGPPGDPGVPGAAGQPGLPGMKGYKGSPGMSGFEGMRGDTGPKGSSGEQGE
PGGLGEVGPKGISGHKGQKGDRGLMGPPGKKPDIPRQMIVEMKGTKGEPGPRGYEGFTGP
RGAKGLPGVPGQEGFHGLPGDPSNEKGYRGDPGAQGLPGIKGMPGVSGKRGISGFDGMPG
PKGTKGSPGAYGASGEKGRKGIKGEKGPRIDLPGRAGFQGELGLPGDPGQKGLTGEVGER
GTPGFDGIQGKTGISGDPGTSGFAGVDGQKGNPGNQGQKGFLGIPGTDGHPGFPGFPGNR
GFPGLKGLYGLHGLKGQKGLQGPAGLEIVGPTGDPGNKGLKGDGGEPNNQRGVPGSLGLK
GFQGPLGDPGDPGPPGPRGLAGIDASPGGPGYIGDHGFVGPKGYEGFPGNRGHPGADGVL
GYKGVQGNDGLPGAGGWKGLKGTQGTFGYRGPDGVPGKKGVKGEQGLMGVPGVTGVQGQR
GPTGPKGNSGATGFQGPPGNKGAAPLPPKLPGERGPQGPQGTPGPHGIKGPIGPQGFPGD
AGFMGPRGQKGMPGINGRPGVPGFRGEVGRIGHAGLQGMEGNRGKPGVSGLPGMPGRSVS
VGYLLVKHSQADQVPMCPVGMAKLWSGYSLLYMEGQEKAHNQDLGLAGSCLPRFSTMPFL
YCNPGDICYYASRNDKSYWLSTTAALPMMPVEDDAIKPYISRCSVCEAPSVAIAVHSQDI
TIPQCPAGWRSLWIGYSFLMHTAAGNEGGGQSLSSPGSCLEDFRTTPFIECNGARGTCHY
FANKHSFWLTSVDTSFHSEPAAETLKAGQLLSRISRCQVCMKNL
NT seq 4995 nt   +upstreamnt  +downstreamnt
atgaatttgactgactacaggtttttgcttctgtgcgtcttcggtgccatcctcgccata
caagtgcacgcaggtggaaagaagcacagtggcccatgtggaggaagagactgcagcggg
ggctgtaaatgcttcccagagaagggtgctaggggtcagccagggcctcttggccctcag
ggcgatcgagggcctccaggtcaaccaggtgatccaggtatccatggaccaaagggtcaa
aaaggtgaccggggccgcaccggcatctttggtccaaaaggaaacgtgggactgactggt
gttcctggcttttctgggagtaatggtattcctggccacccaggacaaggtgggccaagg
ggaaagccaggagctgacggctgtaatggaactaatggagaaccagggttagacgggata
cctggccgtaatggacgtcctggcttttctggccaaccaggaaggaagggggagaaagga
gacactctggaactacacgtttacatggagcgtttccggggagactttggagcaccggga
tcaaatggaatactggggcctccgggatttccaggattacagggtaacagaggaacctcg
gggccaaagggtccgccaggtgaccccggtcctcgaggacaaaagggcacgatggtgaac
gtgctcaagggtgtcaaaggagaccaaggagatatcggaccagcgggacctccaggaaac
gccacctatccacaaattcgggggcttttgggatatcgaggacagaaaggtctgaaagga
gaaagaggagatcgggctgataataaaggggaaactggtgtgatgggattttctggagcg
cgagggccacctggtgcagagggaagccccggcataaagggcgacctcggtgaaacaggg
cccacaggtcaaggtggcataaagggcagcagaggtgaaccaggagagctgatttcatca
ggaaccagctggccctggtcttcagtggctggccctgaaggtcctccaggagagcagggt
cctcagggcgaaaggggcccagttggagaccaagggttcccaggacccccaggactccca
gcctcagctgcacaacatcaagtttgggatttcatggggccatttggtttcaagggtgag
gaaggagagaagggcccaagaggagaaccaggacttcctgctttgtttgcaggacctaaa
ggcagcacagggcgcccaggcaacccgggacccccaggacccaaaggaacatgggaagac
tggtacaagggtgctgctggtgccagaggaagacctggcaggcccggctctaaaggacta
aaaggtgataatggtcaatgtgagtgcgccattgtgaatgctccacctggactccccggc
ccagctggagaaaagggtggtgctggtatgactggagaatttggtaaaaagggtgatgta
ggagatccaggtcctcaaggagaagatggatcccctggattccctggggtgattggtttg
tcagggccaaaaggtcgaaaaggagaatactcagtagccaaacagaaaggatatcaggga
gacccaggtgatcctggacttaatagggagcacggagcagcaggggaacccggcagcatc
gggctgcctggttttcctgggagtccaggttctccaggggaagccacccaaggacaacat
ggagataaaggttttcaaggtcttccagggcaacctggtgctgctgggttaaggggagag
ccaggtgaagacttcagaggggtcaaaggtcagcgtggattacctggtgacgcgggcctc
ccagggtatgaaggagttgcaggaacacccggcagcccaggtggctgtagtccaacagaa
ggtgaaggacaggtggatgtaacagggccgtgcgatgctattccaggacgccctgggcca
ccgggttatccaggacctcttggattgccgggctttataggtccttctggggaaaagggt
ttcaagggtcaacctggagcaagaggagagaaaggagaaatgggagaacaaggcataggt
ggtaaacctggaccaccaggttttcctggcccccgcggagaccgagggcttcctggcatc
catggttcaataggagtacctggatttgatggcctgcctggccgccaggggtttaaagga
gaaaagggtgctcatggagaggttttaggagcatctcccggacctcacggagaccagggg
ctgcctggaattcgaggaagtaaaggcccaagtggggattctggggcccaaggctatcaa
ggaatggatggcatgcctggtatgactggctttaagggtcaacatggtcctttgggtctg
cagggtgaacagggaaggcctgggccaccaggcatttatggctaccctggtgatcctgga
agagcgggtccccctggaccactcggtgctgtcggccagcccggtttcacaggagaaagg
ggaactgaaggggagcctgggtctccaggtccaatgggacgaaaaggtaccccaggggca
tatggtgatgatggtcccattggagaatctgggccaccaggtgacccaggagtgcctggt
gcagctggccaaccaggacttccaggaatgaagggatacaaagggtctcctggaatgtca
ggttttgaggggatgaggggcgacacagggccaaaaggctccagtggggaacaaggagaa
cctggaggacttggagaagttggcccaaaaggcatatcaggccacaaagggcagaaaggt
gaccgtggtctgatgggtccacctggaaagaagcccgacatccctcgccagatgatcgta
gaaatgaagggaaccaaaggagaacctgggcctcgaggatatgaaggttttactggccca
agaggtgctaaaggtttgcctggtgtccccggccaagagggatttcacggtctgcccgga
gaccccagcaatgaaaagggttacagaggagatccaggggcacaagggctgccgggaatc
aaaggcatgccaggagtatctggaaaaagaggaattagtggatttgatggaatgccaggc
cccaagggaactaaaggaagccctggtgcttatggtgcttctggggaaaagggcaggaaa
ggaatcaaaggtgagaaaggcccacgaatagatcttccaggaagggctgggttccaaggc
gagctcggtttgccaggagatccaggtcaaaagggacttacaggggaagtaggagaaagg
ggtacacctggttttgatggaattcaaggaaaaacaggaatctcgggtgatccaggaaca
tcaggatttgcaggtgtagatgggcagaaaggaaatcctggtaaccaaggtcaaaagggt
tttcttggtattcctggaactgatggacatccaggctttcctggtttcccaggaaacaga
ggtttccctggcttgaagggtctttatgggctgcacggattgaagggacagaagggtctt
cagggaccagcaggcctggagatcgtaggaccaacaggagatccagggaacaaagggctg
aaaggagatggtggagaacccaacaatcagcgtggcgttcctggatcacttggtctaaag
ggcttccaaggacctcttggtgaccctggtgaccccggtcccccaggaccccgtggttta
gcaggaatagatgcttcccccggtggaccaggatacattggggatcatggatttgttggc
cccaaaggttacgaaggtttccctggaaacagaggacatcctggtgcggatggtgtcctt
gggtataaaggtgtacaaggaaatgatggattacctggagctggtggttggaaaggtttg
aagggaactcaaggtacatttggatacaggggcccagacggtgtgcctgggaagaaagga
gtgaaaggagaacaagggttgatgggtgttccgggtgtgactggtgtgcaggggcaacga
ggtcccaccggtccaaaaggaaacagtggagctacaggatttcaaggacctccaggaaat
aagggggctgccccacttccccccaaattaccaggagaaagaggtcctcaagggccacag
ggtactccaggaccgcatgggattaaagggccaatagggccacaaggcttccctggagat
gcaggttttatgggacccaggggccagaagggcatgcctgggattaatggcagaccaggc
gtgcctggattccgtggagaagttggacgaataggccatgcaggtctgcaaggcatggaa
ggcaaccgtgggaagcctggtgtgtccggtctgcctggcatgccgggccgcagcgtcagc
gtgggctacttgctggtgaaacacagccaggcagatcaggtccccatgtgtccagtgggc
atggccaagctgtggagcggctacagtttgctgtacatggagggccaagaaaaggcccac
aaccaggatctgggactggcgggctcctgcctcccacgcttcagcaccatgcccttcctg
tactgtaatcccggagacatttgttactatgccagcagaaacgataagtcgtactggttg
tctacgacagctgctcttcccatgatgcccgtagaagacgatgcgatcaaaccgtacatt
agccgctgctcggtgtgcgaggctccatcggtcgccattgcggtgcacagccaggacatc
accatcccgcagtgtcccgcgggctggcgcagcctgtggatcggttactctttcctcatg
cacacagcagcagggaatgaaggtggagggcagtccttatcgtcgcccggttcctgcctc
gaggacttccgcacgacaccgtttatcgagtgtaacggggccagaggcacatgccactac
tttgctaacaagcacagcttctggctgacctctgtggatacgtctttccactcggagcct
gcggcagagacgctcaaagcgggccagctcctgtcacgcatcagccgctgccaggtctgc
atgaagaacctatga

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