Takifugu flavidus (sansaifugu): 130530307
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Entry
130530307 CDS
T09160
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03030
DNA replication
tfs03410
Base excision repair
tfs03420
Nucleotide excision repair
tfs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130530307 (rfc2)
03410 Base excision repair
130530307 (rfc2)
03420 Nucleotide excision repair
130530307 (rfc2)
03430 Mismatch repair
130530307 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfs03032
]
130530307 (rfc2)
03036 Chromosome and associated proteins [BR:
tfs03036
]
130530307 (rfc2)
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130530307 (rfc2)
DNA replication proteins [BR:
tfs03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
130530307 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
130530307 (rfc2)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
130530307 (rfc2)
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
130530307 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
130530307 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
RCF1-5-like_lid
AAA_14
AAA_16
Rad17
Viral_helicase1
Mg_chelatase
AAA_11
AAA_24
RuvB_N
AAA_19
DEAD
MipZ
AAA_5
nSTAND3
AAA_18
AAA_assoc_2
ABC_tran
AAA_30
DNAX_ATPase_lid
MeaB
AAA_28
AAA_25
RNA_helicase
NTPase_1
SLFN-g3_helicase
AAA_2
AAA_23
MCM
PPR_1
FtsK_SpoIIIE
bpMoxR
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
130530307
NCBI-ProteinID:
XP_056897347
LinkDB
All DBs
Position
8:complement(455181..457068)
Genome browser
AA seq
350 aa
AA seq
DB search
MDVEVTEDQKPAASRTNTDADEPSAKNPTYELPWVEKYRPLKLNEVVGNEETVSRLEVFA
REGNVPNIIIAGPPGTGKTTSILCLARALLGASMKDAVLELNASNDRGIDVVRNKIKMFA
QQKVTLPRGRHKIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKIIEPIQSR
CAVLRYSKLTDGQILARLQEVVEKEALSVSDDGLEAVIFTAQGDMRQALNNLQSTNAGFG
FVNSENVFKVCDEPHPLLVKSMLGHCVDGNIDEAYKVVEQLWALGYSPEDIIGNIFRVCK
TYQMAEYLKLEFIKEIGYTHMRVAEGVNSLLQMAGLLGRLCSKTAPPAAS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggacgtagaggtgacggaggaccagaaaccggctgccagccgaacgaacactgacgcc
gatgagccgtcagctaagaaccccacatacgagctgccgtgggtggagaagtaccggccg
ctgaagctgaatgaggttgtggggaacgaggagacggtgagccggttggaagtgttcgcc
agggaagggaacgttccgaacatcatcatcgcaggccctccaggcaccgggaagaccacc
agcatcttgtgcttggcccgagcgctgctaggagcctccatgaaggacgccgtgctggag
ctgaacgcctccaacgacaggggcatcgatgtggtgaggaacaagattaagatgttcgct
caacagaaggtcacgctgcccaggggaaggcacaagatcatcattctggatgaagccgac
agcatgaccgacggtgctcagcaggccttgcgcaggatcatggagatctactcaaagacc
acacgcttcgccctggcctgtaacgcctccgataagatcattgagcccatccagtcccgc
tgcgccgtgttgcggtactccaaactgacggatggacagatcctggcccgcctgcaggag
gtggtggagaaggaggctctgtcggtgtcggacgacgggctggaggcggtcatcttcacg
gcccagggagacatgagacaggctctgaataatctgcagtccaccaacgcgggctttggc
ttcgtcaacagcgagaatgtcttcaaggtgtgtgatgagccccaccctctgctggtgaaa
agcatgctgggacactgcgtggatgggaatattgacgaggcctacaaagtggtggagcag
ctgtgggcgctgggctactccccggaggacatcatcggaaacatcttcagggtctgcaaa
acctaccagatggccgagtacctcaaactggaattcatcaaggagatcggctacacccac
atgagggtggctgagggggtcaattcgctgctccagatggcgggtctcctggggagactc
tgcagcaagacagcgccgcctgctgccagctga
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