KEGG   Takifugu flavidus (sansaifugu): 130530307
Entry
130530307         CDS       T09160                                 
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
tfs  Takifugu flavidus (sansaifugu)
Pathway
tfs03030  DNA replication
tfs03410  Base excision repair
tfs03420  Nucleotide excision repair
tfs03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    130530307 (rfc2)
   03410 Base excision repair
    130530307 (rfc2)
   03420 Nucleotide excision repair
    130530307 (rfc2)
   03430 Mismatch repair
    130530307 (rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tfs03032]
    130530307 (rfc2)
   03036 Chromosome and associated proteins [BR:tfs03036]
    130530307 (rfc2)
   03400 DNA repair and recombination proteins [BR:tfs03400]
    130530307 (rfc2)
DNA replication proteins [BR:tfs03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    130530307 (rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    130530307 (rfc2)
Chromosome and associated proteins [BR:tfs03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    130530307 (rfc2)
DNA repair and recombination proteins [BR:tfs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     130530307 (rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    130530307 (rfc2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 RCF1-5-like_lid AAA_14 AAA_16 Rad17 Viral_helicase1 Mg_chelatase AAA_11 AAA_24 RuvB_N AAA_19 DEAD MipZ AAA_5 nSTAND3 AAA_18 AAA_assoc_2 ABC_tran AAA_30 DNAX_ATPase_lid MeaB AAA_28 AAA_25 RNA_helicase NTPase_1 SLFN-g3_helicase AAA_2 AAA_23 MCM PPR_1 FtsK_SpoIIIE bpMoxR IstB_IS21
Other DBs
NCBI-GeneID: 130530307
NCBI-ProteinID: XP_056897347
LinkDB
Position
8:complement(455181..457068)
AA seq 350 aa
MDVEVTEDQKPAASRTNTDADEPSAKNPTYELPWVEKYRPLKLNEVVGNEETVSRLEVFA
REGNVPNIIIAGPPGTGKTTSILCLARALLGASMKDAVLELNASNDRGIDVVRNKIKMFA
QQKVTLPRGRHKIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKIIEPIQSR
CAVLRYSKLTDGQILARLQEVVEKEALSVSDDGLEAVIFTAQGDMRQALNNLQSTNAGFG
FVNSENVFKVCDEPHPLLVKSMLGHCVDGNIDEAYKVVEQLWALGYSPEDIIGNIFRVCK
TYQMAEYLKLEFIKEIGYTHMRVAEGVNSLLQMAGLLGRLCSKTAPPAAS
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggacgtagaggtgacggaggaccagaaaccggctgccagccgaacgaacactgacgcc
gatgagccgtcagctaagaaccccacatacgagctgccgtgggtggagaagtaccggccg
ctgaagctgaatgaggttgtggggaacgaggagacggtgagccggttggaagtgttcgcc
agggaagggaacgttccgaacatcatcatcgcaggccctccaggcaccgggaagaccacc
agcatcttgtgcttggcccgagcgctgctaggagcctccatgaaggacgccgtgctggag
ctgaacgcctccaacgacaggggcatcgatgtggtgaggaacaagattaagatgttcgct
caacagaaggtcacgctgcccaggggaaggcacaagatcatcattctggatgaagccgac
agcatgaccgacggtgctcagcaggccttgcgcaggatcatggagatctactcaaagacc
acacgcttcgccctggcctgtaacgcctccgataagatcattgagcccatccagtcccgc
tgcgccgtgttgcggtactccaaactgacggatggacagatcctggcccgcctgcaggag
gtggtggagaaggaggctctgtcggtgtcggacgacgggctggaggcggtcatcttcacg
gcccagggagacatgagacaggctctgaataatctgcagtccaccaacgcgggctttggc
ttcgtcaacagcgagaatgtcttcaaggtgtgtgatgagccccaccctctgctggtgaaa
agcatgctgggacactgcgtggatgggaatattgacgaggcctacaaagtggtggagcag
ctgtgggcgctgggctactccccggaggacatcatcggaaacatcttcagggtctgcaaa
acctaccagatggccgagtacctcaaactggaattcatcaaggagatcggctacacccac
atgagggtggctgagggggtcaattcgctgctccagatggcgggtctcctggggagactc
tgcagcaagacagcgccgcctgctgccagctga

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