Takifugu flavidus (sansaifugu): 130530558
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Entry
130530558 CDS
T09160
Symbol
dcp1a
Name
(RefSeq) mRNA-decapping enzyme 1A isoform X1
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130530558 (dcp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130530558 (dcp1a)
03036 Chromosome and associated proteins [BR:
tfs03036
]
130530558 (dcp1a)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130530558 (dcp1a)
mRNA degradation factors
5'-3' decay
Decapping complex
130530558 (dcp1a)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Gene silencing
piRNA pathway
130530558 (dcp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
130530558
NCBI-ProteinID:
XP_056897822
LinkDB
All DBs
Position
8:5528336..5535166
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AA seq
497 aa
AA seq
DB search
METVNAGHMMSLAALQRKDPYINKLLDVTGQVALYNFNSKANEWEKTDIEGTLFVYARSA
SPHHGFTIMNRLSTENLVEPINKDLEFQLQDPFLLYRKGNLGIYSIWFYDKRDCQRIAQL
MVKIVKQEVSHTQRESPKRAERHRTNGLAEPRPVDILELLSKAKEEYQRAQSGETDVRAE
VKTAEHAHTKPRPEKSSHTMVKQITVEELFGSSLPKDPSLPTMPTHSTAAAPSDPPPAFI
QNQPFPTAAHQSTLLPPLLAAQDPVPNQRHQAPGLLPPPFVLHPSPVFQAVVPRSDPQLL
SSLMATPAGSEPRAAPNASTTPSTAPTAYLGQDILSTLKPAAPAVSSDMHKPALAPNFLP
SALFPPHSFQEPVGGNPLLQHSKELDVFPQPSNMIKPLSAVPQGPGLVVPQPEASVLLSP
SVFQQSHGKSPPSAVAPAPPESSSTSVGGTDPATAPCSKTQLQETLIHLIKHDPDFLGAI
HEAYLQSVSKDLGTMKL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgtaaatgccggacatatgatgagcttagcggctctacaaagaaaggaccca
tatataaacaagctgctcgatgttaccggccaggtggcactttacaactttaactcaaaa
gcgaacgaatgggagaagacagacatcgaggggactctgtttgtatatgcaaggtctgcc
tcacctcaccatggcttcactattatgaaccgacttagcacagaaaacctggtggagccc
atcaacaaagatctcgagttccaactacaagacccctttttgctctatcggaaaggcaac
ttggggatctacagtatttggttctatgacaagagggattgtcaacgcattgcccagctg
atggtcaaaatcgtgaaacaagaggtgagccacacccagagagagtcaccgaagagggca
gagcgtcacaggacaaacgggctcgcagagccgaggcctgtcgacatcctggaactcctc
agcaaagccaaagaggaataccagagagcccagtcaggtgaaacagacgtgcgagcagaa
gttaagacggcagagcacgcacacaccaagcctcgaccagagaagagctctcacacgatg
gtgaagcagatcacagtcgaggaactcttcggctcgtcgctccccaaggacccctctcta
cccacgatgcccacacacagcactgccgcagctcccagtgacccccctccagcatttata
cagaaccagccctttcccactgcagcccaccaaagcacactcctccctccccttctggcc
gcacaagatcccgtccccaaccagcgtcaccaggcccccggtcttctccctccccccttt
gtgctccacccaagtcctgtgtttcaggcagtggttccaaggtcagacccccaacttctg
agctctctgatggcgactcctgctggctcagaacctcgcgccgcccctaatgcttcaacc
actccgtcaacggctcccacggcctatctgggtcaggatatactcagcacccttaaacca
gctgcaccagctgtcagttctgacatgcacaaaccggccctcgcacccaacttcctgcca
agcgcgctgttcccgcctcacagtttccaggagcccgtgggtgggaatcctctgctgcag
cacagcaaggagctggatgttttccctcagccttcaaacatgatcaaacctttatctgct
gtccctcagggtcccggtctcgtcgttcctcaaccagaggcttctgtgctcctctcgccc
agcgtcttccagcagtcgcacggtaaatctccaccgtcggcggtcgctcccgcccccccc
gagtcctcgtccacctctgtgggaggaacagatcctgcaacagctccatgcagcaaaacc
cagctgcaggagactctgatacaccttattaaacacgatccagatttcctcggcgccatt
catgaagcttacctgcagagtgtgtccaaggacctgggcaccatgaagctatag
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