Takifugu flavidus (sansaifugu): 130530649
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Entry
130530649 CDS
T09160
Symbol
calcoco1a
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1 isoform X1
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfs03021
]
130530649 (calcoco1a)
04131 Membrane trafficking [BR:
tfs04131
]
130530649 (calcoco1a)
Transcription machinery [BR:
tfs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
130530649 (calcoco1a)
Membrane trafficking [BR:
tfs04131
]
Autophagy
ER-phagy
ER-phagy recepters
130530649 (calcoco1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
SKICH
WD40_alt
Motif
Other DBs
NCBI-GeneID:
130530649
NCBI-ProteinID:
XP_056897998
LinkDB
All DBs
Position
8:complement(8893432..8902598)
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AA seq
706 aa
AA seq
DB search
MEKCVEFRNVGCSYFPQSRVDCHYTISSQHTWASNDWVGLFKMGWTSVRDYHTFVWALVP
PSYEEGTEVNCCVQFQAAYLPKPSCHEYEFVYISAKGEVCSRSSSFIFCAPKPLEDLVTL
EEDSHGEEGGTDMLLVVPRAELLQNRLQECLQERAELLQAHEATNRQREKDKLEYKRARE
AWDRRRSEVESDISRLQRELKHSHEQIKSMERKQEEEQDLVELLTQEKSTLLEANEESRV
RIRELEEDIKTLTQRTVDRETEMERMKERAKRAGAQRKEEESERSALQSKLEQTEADLRS
LSKEFQGLRTSLAQRDTSVLQLQSTITTLTQKLTAAHRKEAEHEATLKEMRSLQERLNTS
ERASEGLKSDLSSLVAQRDHTQSELHQARLQAAQLTLQLADASLALREGRARWAQERQGL
QLTAEKDHARLQKLTAEMETIEESLQEERMERVKLEVEIGREKDCNRVQLCETRRELQEL
KTSVRVTQKEKEQLLAEKQELMHYICQLEQKTGTVSSAKWSAAPVLFPGRPASATSDSED
ENPEALQPLRPPRPLGNYSLCEQGELELLRLATPPPSPREAERSAVVINQPAPLTSPHQA
SAETAAHSSDSEEESDPLQCGRLGSGDETALLLPEHPDTPHRYNLPVETLALSHTPTLPR
MSVFVGTFVDLVHCSAPTLNFNIKTKTEPSNGPLKVCGPDKMSSLC
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtgtgtggagttcaggaacgtgggctgcagctacttccctcagagcagggtg
gactgccactacacaatcagttcccagcacacctgggccagtaacgactgggtcggactc
ttcaagatggggtggacgtcggtgagggactaccacacgtttgtctgggcactggtccct
cccagctatgaagagggcacagaggtcaactgctgtgtgcaattccaggctgcttacctg
cccaagcccagctgtcacgagtacgagtttgtgtacatcagtgcaaagggggaggtgtgc
tcccgcagctccagcttcatattctgtgctccaaaaccccttgaggatctggtaaccctg
gaggaggactctcacggagaggaaggcggcacagacatgttgctggtcgtgcccagggcc
gaactgttgcagaatcgactccaagagtgcctgcaagagcgcgcagagctgctgcaggcg
catgaggcaaccaacaggcagagggagaaagacaaattggagtacaagagggcgagggag
gcctgggacagacgacgcagcgaggtagagagtgacatcagcaggctacagagggagctg
aagcacagtcatgaacagataaagagcatggagaggaagcaggaggaggagcaggacttg
gttgaattacttacccaggagaagagtacgttactggaagcaaatgaggaaagccgggtt
cgaatcagagagctggaggaggacatcaaaacactgactcagaggactgtggacagagag
acagagatggagcggatgaaggagagagcaaagagggccggagctcagcggaaagaggag
gagagtgagagaagtgctctgcaatctaagctggagcagacggaggctgacctccggagt
ctgtcgaaggagtttcagggtctgaggacgtcgctggcccagagagacaccagcgttctg
cagctccagagcaccatcaccaccctgacgcagaagctcaccgccgcccacaggaaagag
gcagagcacgaggccacgctgaaggaaatgcgcagccttcaggagcgtctgaacaccagc
gagcgagcttccgaaggcctgaagagcgatctgagctccctggtcgctcagagggatcac
acgcagtccgagctgcaccaggcccgcctgcaggctgctcagctgaccctccagctcgca
gatgccagcctggccttgagggaaggacgagctcgctgggcacaggagaggcagggcctg
cagctcacggctgagaaggaccacgcgcgcctgcagaaactcaccgctgagatggagacg
attgaggagagtctgcaggaggagaggatggagagagtcaagctggaggttgagattggg
agagaaaaggattgtaatcgggtgcagctctgcgagacccggcgggagctgcaggagctg
aaaaccagtgtgagggtcacccagaaagagaaggagcagctgctggcagagaaacaggag
ctgatgcactacatctgtcagctggagcagaagacaggaacggtgtcaagtgccaagtgg
agcgctgctccggttctgtttccaggccgacccgccagcgccacctccgattccgaggat
gagaatcccgaggcgctgcagcccctccgtccaccgagacctctgggaaactacagcctg
tgcgagcagggcgagctcgagttgctgcgcctcgccaccccccctccgtccccaagagag
gccgagaggagtgcggtggtcatcaaccagccggcgccgctgacctcgccgcaccaggcc
agcgccgagacggctgcgcacagctcggattcggaggaggaatctgatccccttcagtgt
gggcggctgggatctggagatgaaactgctcttctgctacctgagcacccagacacccct
cacaggtacaacctcccagtagaaactctcgctctctctcacacacccacgcttcctcgt
atgtctgtctttgtggggacatttgtagacctggtacattgctcagcacctacactgaat
tttaacattaagaccaaaactgaaccctcaaacggtcctttaaaggtgtgtgggccagac
aaaatgtcctcactttgctag
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