KEGG   Takifugu flavidus (sansaifugu): 130530727
Entry
130530727         CDS       T09160                                 
Symbol
kdm5bb
Name
(RefSeq) lysine-specific demethylase 5B-B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
tfs  Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tfs01009]
    130530727 (kdm5bb)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tfs03036]
    130530727 (kdm5bb)
Enzymes [BR:tfs01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     130530727 (kdm5bb)
Protein phosphatases and associated proteins [BR:tfs01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     130530727 (kdm5bb)
Chromosome and associated proteins [BR:tfs03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    130530727 (kdm5bb)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN PHDvar_NSD
Other DBs
NCBI-GeneID: 130530727
NCBI-ProteinID: XP_056898184
LinkDB
Position
8:complement(14217817..14228855)
AA seq 1539 aa
MSQPRPDEFKPPPECPVFEPSWEEFKDPYAFINKIRPIAEKTGICKVRPPPGWQPPFACD
VDKLHFVPRIQRLNELEAQTRVKLNFLDQIAKFWDLQGCTLKIPHVERKILDLYKLNKLV
ADEGGFDIVCQDRRWTKIAVQMGFAPGKAVGSHLRGHYEKILYPYNLFQSGANLLAPEAA
SKQMSLEADPEPEKCVQKPNQQLQSPGNTENLDTKDLKLQEEAQTQPAQTPDSCPSARRA
KRMKCEASCVKTEPGEPGDSKPNLRRRMGSLVVKPEPEKEIPILVKQEPVEIKEPTIDAD
KFKSRYKKFIPPILPSPVDLVVCLVCGSGGEEDRLLLCDGCDDSYHTFCLIPPLNDVPKG
DWRCPKCLAQECCKPQEAFGFEQAFRDYSLRAFGQMADAFKSDYFNMPVHMVPTELVEKE
FWRLVGAIDEDVTVEYGADIASKEFGSGFPIPNGKFKVSPADEKYLQCGWNLNNLAMMNR
SVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGFAAEQ
LEEVMRKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRAYHSG
FNQGFNFAEAVNFCTVDWMPLGRQCVDHYRMLHRYNVFSHDEMVCNMASKAETLDVVLAS
AVHKDMVAMIQDEDTLREKVKTMGVSQCQEAKYDHLQDDERQCAKCRTTCYLSAVTCPCS
PGVLVCLYHITDLCSCPVSNYTLNYRYTLDDLVPMMTAVKKRAELYDDWASLVLETLEAK
LEKKKGLPVFRTLLAESESKTFPDNDLLRRLRMVTQDAEKCSSVAQQLLNGKRQTRYRCG
NGKSCSQLTVEELSSFVRQLYNLPCSLPQAPLLKELLNRVEDFQQHSEKVLADEVPSVAE
IQSLLDVSFDFDVELPELPRLRVRLEQARWLEGVQQASAQPATLTLETMRRLIDQGVGLA
PHPSVEKAMAHLQELLTVSEHWEDKASSLLKARPPHSIETLHAAAEKASIVPAYLPNCLL
LKDAVRKAREWLQEAEELQAGGGELMLDGLSDAVLRGQAIQVHLEPLDRLESLMAEVHTW
KESAATLFLRKDSNLTLLEVLCPKCEVGQASSPKRKAKKGKESPKSSKKKTRINSLSDVE
KVLSETKDSTSTMATLEELRLREMEAFANLRAANESKLLPTAECMDLRVCVCQKAPMGAM
LQCELCRDAFHSVCVRDLSDSCEAWPWLCPHCRRSGKPPLNKVLALLASLQHTGVRLPEG
EALHHLVERTLSWQQRMQEMLLSYNLPELEERPATPPTLTCWASGSHISHNNTQAPCLTP
EWTRTDHGQTVFYTEQRCIPLQGLSQDLEELMVEGLLLQVSLPEVQNLYSILLDRASSLH
TDRCTSPPQTEPTDCSPHMHFNSQGNNHQDGAAGVRDASEKKAKRHLDREDLDTEGRRDK
KHTHKRQKMNKKNLQRRAASTSSSPRSDFSQSDDSDEEMVTCPAERCQQPEGDEVDWVQC
DGSCNQWFHQVCVGVSAEMAEKEDYICVGCTLSDGHTRK
NT seq 4620 nt   +upstreamnt  +downstreamnt
atgagccagcctcggccggacgagttcaagcctcctccggagtgcccggtcttcgaaccc
agctgggaagaattcaaagatccgtatgcgttcatcaataagatccgacccatcgctgag
aaaaccgggatttgcaaagtgcggccgcccccgggttggcagcctccgtttgcttgtgac
gttgacaaacttcactttgttccacgaatccagaggctgaacgagctcgaggcacagacc
agagtcaagctcaacttcttggaccagattgctaaattctgggatttgcaaggctgtacc
ctgaagattcctcatgtggagcggaagattttggatttatacaagttaaacaagttggtt
gcagatgagggcgggtttgacatcgtgtgtcaggacaggagatggaccaagattgctgta
caaatgggttttgcccccgggaaagctgttgggtctcacctgcgggggcattatgagaaa
atcctctatccctacaacctgttccagagcggagcaaacctgctggccccagaggcagct
tccaaacagatgagtttggaggctgatcctgaacctgaaaagtgtgttcaaaagcccaac
cagcaactgcagagtccaggaaacaccgagaacctggacacaaaggacctcaaattgcag
gaggaggctcagacgcagcctgcccagacccctgacagctgccccagcgctcgcagagcc
aaacgaatgaagtgtgaggccagctgtgtgaagactgaaccaggtgagcccggtgacagt
aaaccaaacctgcggcggaggatgggctctttagtcgtgaagccagaaccagaaaaagag
attcctattctggtgaaacaggaaccagttgaaattaaggaaccaacaattgatgctgac
aaattcaagtcccggtacaagaaattcatccctcccattcttcccagtccagtggatctg
gtggtgtgtctggtttgtggcagtggtggagaagaggaccgtctgttactgtgcgacggc
tgtgacgacagctaccacactttctgcctgatccctcctctgaacgacgtccctaaagga
gactggaggtgccccaagtgcttggctcaggaatgttgcaaacctcaggaggcgtttggc
ttcgagcaggcattcagggattattccctgcgtgcatttgggcaaatggccgacgcgttc
aagtccgattacttcaacatgccagttcatatggtgcccacggagctggtggagaaagaa
ttctggcgtttggtgggagccatcgacgaagacgttactgtagaatacggagcggatatt
gcatcaaaggagtttgggagcgggttccccattcccaatgggaaattcaaggtttctccg
gctgatgagaaatacctccagtgtggctggaacctgaacaacttggccatgatgaaccgt
tctgtgttgacccacgtgacggctgacatctgtgggatgacacttccgtggctttatgtc
ggcatgtgtttctcctccttctgctggcacatcgaggatcactggagctactccatcaac
tacctccactggggggagcccaaaacctggtacggagctcctggctttgctgcagagcaa
ctggaggaggtgatgcggaaactggccccagagctgtttgagtctcagcctgacttactg
caccagctggtcaccatcatgaaccccaacaccctgatggcccacggagtcccaatttac
aggacaaaccaatgtgctggggaatttgtcatcacgtttcctcgcgcctaccacagcggc
ttcaaccagggctttaactttgctgaagcagtcaacttttgcaccgtggattggatgcct
ctcggcagacagtgtgtcgaccattatcgtatgctgcaccggtacaacgttttctcccat
gacgagatggtttgcaacatggcctccaaagcagagacgctggatgtggtcctggcttcg
gctgtccacaaggacatggtggccatgattcaggacgaggacacactgagggagaaagtg
aaaacaatgggagtgtctcagtgtcaggaagccaaatacgaccacctccaggatgacgag
cgacagtgtgccaaatgcagaaccacctgctacctgtcggccgtcacctgtccctgcagc
ccgggggtactggtctgtctgtaccacatcactgacctttgctcctgccccgtcagcaac
tacacactgaattacagatacacactggatgacctcgtccccatgatgactgctgtgaag
aagcgagcggagctctatgatgattgggcctctctggtgctggagacgctggaggcgaaa
ctggagaagaagaaaggtctgccagtgttccgcacccttcttgctgaatccgagtccaag
acgttccctgacaacgacctgctgcgtcggctacgaatggtcacgcaggatgcagagaag
tgttcctcagtggctcagcagctattaaatggcaagaggcagaccaggtatcgatgtgga
aatggcaagtcctgcagccagctgactgtggaggagctgagttcatttgtgaggcagctg
tataacctcccctgcagtctcccgcaggccccgttattgaaggagctcttgaatcgcgtt
gaagatttccagcagcacagcgagaaggtgctggcggatgaagttcccagcgttgctgag
atccagagcttgctggacgtcagctttgactttgacgtggagcttcccgagctgccgcgg
ttgcgagtgaggctggaacaggcacgctggctggagggagtccagcaggccagcgctcag
cccgccaccctgacgctggagaccatgaggaggctcatcgaccagggagtgggactggct
cctcatccctctgtggagaaggctatggcgcatttgcaggagctgctgaccgtgtccgag
cactgggaagacaaagcgagcagtctgctgaaggccagaccaccacactccatcgagacc
cttcatgctgctgctgagaaggcgtctatcgtccctgcctacctcccaaactgtcttctc
ctcaaagacgccgtcagaaaagctcgagagtggcttcaggaggcggaagagctccaggcc
ggcggtggggagctgatgctggacggcctctccgacgcggtgctgcgaggacaggccatc
caagtgcacctggagcccttagacaggctggagtctctgatggccgaggttcacacgtgg
aaagaatctgcagctacattattcctccggaaagattctaatctcactttacttgaggtt
ttgtgtccaaaatgtgaagtcggacaggcatcttctccaaagagaaaagctaagaaagga
aaagaatcgcctaaaagcagcaaaaagaaaacgaggatcaactctctcagtgacgtggaa
aaagtgctttcagagaccaaggattctacctctacaatggcaactctggaggagctccgg
ttgagggagatggaggctttcgctaatctcagggcagcaaatgagtcaaagctccttccc
acagcagagtgtatggacctgagggtgtgtgtctgtcagaaggcgcccatgggcgccatg
ctgcagtgcgagctctgcagggacgccttccacagcgtgtgtgtccgagacctgtcggac
tcttgcgaagcgtggccgtggctctgtccgcactgccggcgatctggaaagccccctctg
aacaaagtcctcgccctgctggcgtctctgcagcacacgggggtgcggctgccagagggc
gaagcgctgcaccatctggtggagaggacacttagctggcagcagcggatgcaggagatg
ttgctgtcttataacctgccagaacttgaagagagaccagcaactcctcccacgctaaca
tgctgggcatcaggcagccacatctctcacaacaacactcaggccccgtgtttgacacca
gagtggaccaggaccgaccacggtcaaacggtcttttataccgagcagaggtgcatccca
ctgcagggtctaagtcaggatctggaggagctgatggtggaggggctcctgctgcaggtg
tctctgccagaggtccagaacctctacagcattttactggacagagccagcagcttgcac
acggacagatgcacgtcaccgcctcagaccgagcccacagactgcagtccacacatgcat
ttcaactctcagggaaacaatcaccaggatggcgctgctggtgtgagggacgcctcagaa
aagaaagcaaagcggcatctggacagggaggatttggacacggaaggaaggagggacaaa
aagcacacgcataagagacagaagatgaataaaaagaaccttcaacgcagggcagcctcc
acctcttcatctccgcgctctgatttctctcagtccgatgactcggatgaagaaatggtc
acatgtccagctgagagatgtcagcagccagagggagacgaggtggactgggtccagtgt
gacggcagctgtaaccagtggttccaccaggtgtgcgtgggcgtttcggccgagatggcc
gagaaggaggactacatttgtgtcgggtgcacgctgagcgacggacacacgaggaagtga

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