Takifugu flavidus (sansaifugu): 130530920
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Entry
130530920 CDS
T09160
Name
(RefSeq) synaptopodin isoform X1
KO
K21112
synaptopodin
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130530920
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
130530920
NCBI-ProteinID:
XP_056898488
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All DBs
Position
9:2265718..2279874
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AA seq
1108 aa
AA seq
DB search
MDMERGHMSVKRGESWSPGGLRKSFSATRTTHPLGTDCNAPWERAGFNKDEMSSRKANLT
RSASLSEKELKEARVRSQIIAAQLTIPSSSSSRGVQLFNRRKQRVDAFTRESCGGRSEED
RPENVKINPTSINVTWEGKNSKGSVRGQDFKNSTTQPHLSVPGTVHSRNDVADRGEEFYK
REDMEVIQERHFLPVKEEEEEVGDKIHEELEVKDEIAPESSNADEEVEIKGSHPGPVLPG
KVNGCHGAFEPERVCVSTSKQTSTIINRTARPFLSPLTVQSPEAGCPVMDIPPPPSYDTP
PLPAFTAPQLLAFSPPPPPPSYPTPPLPAFTNQPPQTYCSSPPPVSPVMSPSSPPPSEFP
ASILSQYPPMPNYGPPAAQSAAEKRTTTPIKTGVLEESAAKRATKKSMFTFKEKPVVSPN
PDLLLLVQGVDERKKHGHKSVPEPACEEELLALGAEASNFLAKEEAKVEDAKAPEWVSCL
KSSRTQPRPEHRPEQTLINVSGKGAELFAKRQSRMEKYVVENQGGQMRSPSPTMSLPPSW
VYPSTMPGRVKAIVKNSDVSAQLSQNLQAQQAAKQRPRQKTKAPEPAPEPPPVENGCSKI
EMDLSSHRPYQIDSNLFIIKPVMDPISTLPRGAPHSRNLLTQAFSRQASLPNSSTLNFRT
QCTSPQLPLSPARGRGETVSHPGSGAPRSSSAMSAFSPERVSSPRSGVQAPRPTFSAKKS
GIVPQTPKDSGPSVSETPAQTRTSGLSKCFSSPEGATAAWTPGHRPSTSISSCPAAPRMS
SPGGPRCLSPEVTQTVHFSPVTSTTTSASPRTFAAASPRSPPWGSRCQSPMMTQNTRSSS
VSPVPGFRPSQTSKTAPFSPPWGSRCHSPTNQSPATFKPFQTSTTTSPCSPPWGSRCQSP
MPSQNASPVISVSTSRPTQTSTSPASPPWSLRSQSPGLSQTRLSFPATKPVHTSSVASPI
HTPRDSCCVSPVINSLDSKANHRLLAKNIINAAKRKNSPSPGALSGHSLPISPVGKPSYD
CHQQPISPFQSRALGAQSPTFTSPPTTPTQRICSPVRLYNSRSLTDSDASVESEDSGHRS
PGLQSYNTCPRGWGGSLRVKRSTVSTDL
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggacatggagcggggacacatgtctgtcaaaagaggggagagctggagtccaggagga
ctcagaaagtctttcagtgcaacgcgaaccacgcacccccttgggacagactgtaatgca
ccatgggagagggcaggattcaacaaagacgagatgagcagccggaaagcaaatttgacc
cggagtgcaagtttatcagagaaggagctcaaagaagctcgtgtcaggagtcagatcatt
gcagctcagctgaccatcccgtccagttccagctccaggggcgtgcagctattcaaccgt
cgcaaacagagggttgatgccttcacacgtgaaagctgtggagggaggtcagaggaggac
agaccagagaatgtaaaaatcaacccaacatctatcaatgtaacatgggaagggaaaaac
agtaagggaagcgtcagaggacaggattttaaaaatagcaccacccagccacatttgtca
gttcctgggacagtgcattcacgtaacgacgtggcggaccgaggtgaggaattctacaag
cgagaggacatggaggtcatccaagaaagacatttccttcctgtcaaggaagaggaggaa
gaagtgggagataaaatccacgaggaacttgaggtcaaggatgagattgcccctgaaagt
agcaacgctgatgaggaagtagagataaaggggagccatccagggccagttctccctgga
aaggttaatggctgtcacggtgcatttgaaccagagagagtgtgtgtgtccacttccaaa
cagacaagcacaatcatcaatcgaaccgccaggcctttcctgtcaccgctgacggtgcag
tctccagaggcagggtgtcccgtcatggacatcccccctcctccgtcttatgatactccc
cctctccctgctttcactgctccccaactgttggcattctcccctcctccaccaccacca
tcctatcctacaccccctctacctgcctttaccaaccagccaccgcagacctactgttcc
agtccacccccagtatcgcctgtgatgtccccttcctcccctccaccatctgagtttcct
gcttccattttatcccagtacccacccatgcccaattatggtccccctgcagctcagtca
gctgcagaaaaaaggacaacaactccaataaaaacaggagtacttgaggaaagtgccgct
aaaagagcaactaagaagtcgatgttcacattcaaagagaaaccagtggtatctccgaat
cctgacctactcttgctggtgcagggggtggatgaaaggaagaaacatggacataaatct
gtcccagaaccagcctgtgaggaagagctattggcactgggagcagaagcctccaacttc
ctcgccaaggaggaggcaaaggtcgaagatgcaaaagctccagaatgggtatcatgtctc
aagagctccaggacccaaccaaggcccgaacacaggcccgaacagactctcatcaatgta
tcaggaaagggagcagagctgtttgccaagcgtcagtccaggatggagaaatacgttgta
gaaaaccaaggtggacagatgcgctctccatctcctaccatgtctttgcctccatcgtgg
gtatacccatcaactatgcctggacgagtcaaagccattgtgaaaaactctgacgttagt
gctcagctatcacaaaacttacaggcccaacaagcagccaaacaacgcccaagacagaag
actaaagcaccagaaccagctccagaaccacctcctgtagaaaacggttgctctaagata
gagatggatctttcaagccaccgaccttaccaaatagactccaatctcttcatcattaaa
ccagtcatggaccccataagtaccctacccagaggagccccgcactccagaaaccttctg
acccaagctttctcaagacaagcttccttacctaacagctctactttgaactttagaacc
cagtgtacgtcaccacagctgcctctgagtcctgcaagaggaagaggagagaccgtgtca
catccaggctcaggagcaccgaggagcagttctgcaatgtctgctttttctccagagaga
gtgtcctcgccccggtcaggggtccaggcaccaaggcctacattttctgccaagaaatca
gggattgtaccacagacaccgaaggattcgggcccatctgtgagtgagactccagctcaa
actaggacatccggccttagcaagtgtttcagcagcccagagggggccacagcagcctgg
actcctggtcaccgtccctccacctccatctccagctgcccagctgctcctcgcatgtct
tcgcccggtggtccccgatgtctgtctcctgaggtgactcagactgtccacttttctccc
gtcacctccaccacaacatctgcgtcaccccggacgtttgcagccgcctctcctcgctct
cctccttggggttcgagatgtcagtcaccgatgatgacccaaaacactcggtcgtccagc
gtctcgcccgttcctggtttcagaccgtcccagacttcaaagacggctcctttttcacct
ccctggggttcgaggtgccactccccaacaaaccagtctcccgccacattcaaaccgttc
caaacctccacgaccacatccccatgctctcctccgtggggctccagatgccagtccccg
atgccaagccagaatgcttcccctgtaatctccgtttccacatccagaccgacacaaacg
tctacgtccccggcctctcctccgtggagtttgcgctcgcagtctccgggactctcccag
accagactgtccttccccgccactaagcccgtgcacacgtcctccgtcgcctctcccatc
cacacaccaagagacagttgctgcgtgtcccctgtgatcaacagcctcgactctaaagcc
aaccaccgcctcctggcgaagaacatcatcaatgcagccaagcgtaagaacagcccctcg
cctggagccttgagcggccacagcctccccatctcacctgtggggaaacccagctatgac
tgtcaccagcagcccatcagtcccttccagtcacgagcactgggggcccagtctccaacc
tttaccagcccccccacaactccaacacagaggatctgctccccagtgaggctgtataac
agccgctccctcaccgactcggacgcctccgtggagtccgaggactccggccaccgatcc
cccgggctgcagtcctacaacacctgtccccgtggctgggggggcagcctgagggtgaag
agaagtaccgtctccaccgacctgtga
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