Takifugu flavidus (sansaifugu): 130531005
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Entry
130531005 CDS
T09160
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130531005 (ssrp1a)
03036 Chromosome and associated proteins [BR:
tfs03036
]
130531005 (ssrp1a)
Transcription factors [BR:
tfs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
130531005 (ssrp1a)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
130531005 (ssrp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
HMG_box
POB3_N
HMG_box_2
HMG_WDHD1
SSRP1_C
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
130531005
NCBI-ProteinID:
XP_056898644
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All DBs
Position
9:10788148..10797043
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AA seq
708 aa
AA seq
DB search
MGDTLEFNDIYQEVKGSWNDGRLRFSKQNVVYKSSKTGKVDSIPAGELNLAQWRRVCLGH
GIKLGTSTGHVYKYDGFRDTDFEKILEFFKANYKVELTERDMSVKGWNWGTAKFSGPLLQ
FDINENTAFEIPLSNVSQCATGKNEVTLEFHQNDDTEISLMEVRFYVPPNQTDERQDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEENINLALNMSEEDVERRFE
GKLSKHMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEGMKGKIDEYSDSDDDQHDAYLERMKAEGKIREEGNDSDESDSGSDES
FNPGEEDDDIAEEYDSNASASDSSDEGDDSEDESAKKKKAKKVKVVKEKKERKPRKEKKQ
KDTGGPKRPMSAYMLWLNASRERIKSENPGISVTEISKKAGEMWRQLGKDEKEEWETKAG
EAKEEYEKAKKEYKESGRMPTTTSKKETKKSAGKKEEKKRKSAGGDKDKERGAGNDSFKS
REFIETSEESSSDSDRKSKSKKKKKKEESDEEEEEAMSTPASSEEESE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgggagacactttggagttcaatgacatataccaggaggtcaaagggtcctggaatgac
ggacggcttcgtttcagcaaacaaaatgtggtttacaagagcagcaagacaggaaaggtg
gacagcatccccgcaggagagctcaacctggctcagtggagacgagtgtgtttaggtcat
ggtatcaagcttggaacaagcacgggacatgtttacaaatatgatggatttagggacaca
gactttgaaaagatcttggagtttttcaaggcaaactacaaagtggagctaacggagagg
gacatgagtgtgaaaggatggaactggggtacggccaagttctctgggcctctgttacag
tttgacataaatgaaaacacagcatttgagatcccactttccaacgtgtcccaatgtgcc
actgggaaaaacgaggtgactctggagttccaccagaacgacgacacagagatctccctc
atggaggtccgtttctatgtcccacccaaccagactgatgaaagacaagatccagttgag
gcctttgctcagaatgtgctgtctaaggctgatgtgattcaggccactggagatgctgtg
tgtattttcaaagagctgcagtgtctcactcccagaggaagatacgacatccgcatctac
ccgactttccttcaccttcacggtaagacctttgactacaagatcccctacaccaccgtt
ctccgactcttcctgctgccacacaaggatcagagacagatgttctttgtgatcagtctg
gaccctcccatcaaacagggccagacacgttatcactttctcattctgctgttttccaag
gaggagaacatcaacctcgccctcaacatgagcgaggaggatgttgaacgtcggtttgag
ggtaaactcagtaaacacatgtcagggtcgctttatgagatggttagcagagttatgaag
gctctggtcaaccgcaagatcactgtgcctggaaacttccagggtcactctggtgctcag
tgcatcacctgttcctacaaggcttcttcaggccttctataccccctagagaggggcttc
atttatgtccacaagcctcctgtacacctgcgcttcgaggagatctcctgtgtcaacttc
gcccgaggcaccaccaccactcggtcctttgactttgaaattgagacaaaacagggaaat
cagtacaccttcagcagcatcgagagggaggaatacggcaaactatttgattttgtgaat
gccaagaagctcaacatcaagaacagagggttcaaagagggcatgaagggtaagattgac
gagtacagcgactcggacgacgaccagcacgacgcctacctggagaggatgaaggctgag
ggcaagatcagggaggaaggcaacgacagcgatgagtccgattctggaagtgatgaatcc
ttcaatcccggggaagaagacgatgacatagcggaagagtacgacagcaacgcctcagcc
agcgacagcagcgatgaaggggacgatagcgaggacgagagtgcaaaaaagaagaaggca
aagaaagtgaaagtggtgaaggagaaaaaagagaggaaaccacgcaaagagaaaaagcag
aaggataccggtggccccaagaggccaatgagtgcctacatgctgtggctcaacgccagc
cgggagcggatcaagtcagagaacccgggaatctccgtcacagagatatcaaagaaggcc
ggcgagatgtggagacagctgggcaaggacgagaaggaggaatgggaaacaaaggcagga
gaggctaaagaggagtatgaaaaagcaaagaaggagtacaaagagagtgggaggatgccc
accaccacttccaagaaggaaaccaaaaaatctgcgggtaaaaaggaggagaagaagagg
aagtctgcaggaggagataaggacaaggagcgaggagctggcaacgacagcttcaaaagt
cgagagttcattgagaccagcgaggagagttcctccgactccgatcgcaagagcaagtcc
aagaagaagaaaaagaaggaggagtcagatgaagaggaggaagaagcaatgtccacccct
gccagctcagaggaggaatctgaatga
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