Takifugu flavidus (sansaifugu): 130531024
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Entry
130531024 CDS
T09160
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04120
Ubiquitin mediated proteolysis
tfs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130531024 (syvn1)
04120 Ubiquitin mediated proteolysis
130531024 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130531024 (syvn1)
Enzymes [BR:
tfs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130531024 (syvn1)
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130531024 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
130531024
NCBI-ProteinID:
XP_056898688
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All DBs
Position
9:13600912..13609351
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AA seq
614 aa
AA seq
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MMVRAVLVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGK
FMRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWL
AEDRVDFMERSPNISWLFHFRVLSLLGMLGVLDFLFVNHACHSILTRGASVQLVFGFEYA
ILLTMVLTTFIKYLLHTIDLNSENPWENKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHT
FPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMV
TGAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTPAQPQAQPPLPAGPPNA
PAAPPANVPGMLPGFPPGIFPFWGPFPAVPPPAAPPAAADAPQSSTEAPQASGSSQPSSS
NADTGAAAAPQGPSVPGFPFSLPPPAPFPAAPWAPMPPLPPFMSSMPPPPPSLSQLSEEE
LRDMEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVTTLAPPRADGGPDVSTSHIH
SSPVVGSSTDVEDAPSSELPHAAEDAAVSLDTERQTADEGAAADEEGEPSAAELRRRRLR
KLASSPFTPPPPEN
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgatggtacgagcagtcttggtgactgccaccagtctggcattgactggggctgtggtg
gcacatgcttatctacttaaacaccagttctacccaactgtggtctacctcaccaagagc
agcccgagcatggcggtgttgtatattcaggcctttgtgttggtgttcctcctgggaaag
ttcatgaggaaggtcttttttggacagctgagggcggcagaaatggagcatctcatcgag
cgctcctggtatgcagtgacggagacgtgcctggcattcactgtgttcagagatgacttc
tctccccgcttcgttgctctcttcacccttctgctttttcttaagtgctttcactggctg
gctgaggaccgggtggactttatggagagaagtccaaatatatcatggcttttccacttc
agagtattgtctctcttggggatgttgggtgttctggatttcctgtttgtcaaccacgcc
tgtcacagcatcctcaccagaggagcatcagtccagctcgtttttggatttgagtatgca
atcctgctgaccatggtgctgacaacatttatcaaataccttctgcacactatcgacttg
aacagtgagaatccctgggaaaataaggccgtctacatgctctatactgagctcttcaca
ggtttcatcaaagttctgctgtacatcgccttcatgaccatcatgataaaggtccacacc
ttcccactgtttgccatccggcccatgtacctggctatgaggcagttcaagaaagctgtg
acagatgctatcatgtctcgcagagccattcgcaacatgaacacgttgtaccctgatgcc
acccctgaagacctgcaggcttctgacaacgtctgtatcatctgtcgcgaggaaatggtt
actggagccaagaaactgccttgtaaccacattttccactccagctgcctgcgctcctgg
ttccagaggcaacagacttgtccgacctgtcgaatggacgtgctccgggcctctaataac
aatcagaccccagcgcagccacaggcacaaccccctcttccagcaggccctccaaatgca
cccgcagctccaccggctaatgttcctggtatgttgcctggttttccacctgggatcttc
ccattttggggtcccttcccagcggtgccccctccggcggctcctccagctgctgctgat
gctccacagagcagcacagaggctccgcaggcatctggttccagtcagccctcgtcgtca
aacgcagacactggtgctgctgccgccccgcagggaccatcagtgccaggcttccccttc
tccctgcctccccctgcccccttccccgctgcaccatgggcaccgatgccaccacttcct
ccctttatgtcatcaatgcctcctcctcccccttctctgtctcaactgtccgaggaggag
ctgagggacatggaggcggagggacggcgggggctggaggccaggctacagtgtctccag
aacatccacaccctcctggacgccgccatgctcaacatccaccactacctcagcaccgtc
accacactcgctcctccccgtgctgacggcgggccagatgtcagtaccagtcacatccat
tcctcccctgtggttggcagtagcacagatgtggaggacgctcccagctctgagctgcct
cacgcagccgaagatgcggccgtttccttggatacggaaagacaaacggcggacgaagga
gcagcggcggacgaggaaggagaaccgagcgctgccgaactgaggcggcgccgccttcgc
aagctggcgtcatcgccgttcactcctcctcctccagagaactga
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