Takifugu flavidus (sansaifugu): 130531164
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Entry
130531164 CDS
T09160
Symbol
limch1b
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tfs04990
]
130531164 (limch1b)
Domain-containing proteins not elsewhere classified [BR:
tfs04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
130531164 (limch1b)
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GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
130531164
NCBI-ProteinID:
XP_056898970
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All DBs
Position
9:complement(7272427..7314808)
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AA seq
1248 aa
AA seq
DB search
MASPAADLGPSHQHHPVSDSAADSAFQEAQTWIEAVTGRCFGDKDFRGGLENGILLCELL
SSIKPGSVKKINRLQTPIAGLDNVSVFLRGCEEFGLKGSQLFDPGDLQDTSARPTAKGTD
CTRKVKNVLITIYWLGRAANGCTSYNGPTLDLKEFEGLLSQMRKEAEEAESPKRNIRDSG
YIDCWDSERSDSLSPPRHCREDSFDSLDSFGSRSRQTPSPDVPVTHGSSDGRGSDSESDG
PPHRKMPDVRKDDMSVRRTSVTELRTPLPFNQYLPNKSNHSGYMPTPLRKKMNDKDEGRK
DEGRKSWSTATSPVGGDRPCSTPTRSCSEELFQHSTPLAAKDSASQDVITPEKNAPALQQ
EAGSVGTAVIGAKLVTGQEESLTSPQCTSTPSPSHFLPGSTGLATTAKSRQQGQAWSENE
DPRGGASWTECSLRATVSCTLGVSDDAQSVSMIDMRAEEETILQPHSQVRHELMHNQYNK
MKEEEDHWQDDLARWKNRRRSISQDLIKKEEERKMMEQLLSGDTCTSVRRRSIKTYREIV
ADKERREQELRDAYRRARTPEEASSVLQRYAQRFSISEAVLEQLQLPKLLDRSISADPTY
PCSPFPLSVSPSSSPTTPDPFDADPEGPLRYLRQQSAPAPKFTSTYEARIEEFTKDSSQQ
RPQIRSRSSEPPTARGLSPKPVPLLMPKPYLQSRPPAAEQWPSKADGLLPINGEVVGVNT
QTASPQSQGRESPHFLASPSKHWNNNAEPALSAASSTHSPHASIEGENQASAKTEETRTE
TTFVQHSSPPSRPTTLPSELHKTQESFTKTRSSSGAATKEENVKLADRHAPPSEAKQGQN
ENVSQHFANLDSSGVSTQPMTSQASVTASQRSEQDNHEVPSSAAPGRLGHHPAIEKTEFA
NGATSSLATCNPKLRWEFFAAPGEAQEHRGNQVSFPVLPQARQGDRWSWDPDEERKRQER
WQQEQERMLQEKYQREQEKLKEEWEKAQREVAEEERKYHEEERRILAETLMPLTPCSSGV
TTSSRGEASSPSEPQDTIVRSLADWERKQELLERQSRGSTENAEHKQRTNDRTSDISTAD
DSMKTGRSSLSQSPCLSDTLQNGQKAAPVSPKSSTDVKKQQPVMDNSKQMRPAGTRRIGP
ADSNNTGRSSSKPPASCPPPPDTVPPAPNRSVSGKKLCSSCGHPLGKGAAMIIETLSLYF
HIHCFKCGVCKGQLGDTTTGTDVRIRNGLLNCHQCYIRSRSAGQPTTL
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtccggctgcagaccttggaccatctcatcagcatcaccctgtgagcgactcg
gccgcagactccgcgtttcaggaggcacagacatggatagaggctgtgacagggagatgc
tttggtgacaaagatttcagaggaggtttggagaacgggatcctcttatgcgaattgttg
agctcaattaaacctggatcggtgaagaaaatcaacagacttcaaacccccatagctggc
ctggacaacgtcagtgtgttcctgcgtggctgcgaggagttcggactgaaaggatcccag
ctgtttgaccccggagacctacaagacacgtcagcacgccccactgccaagggaactgac
tgcacccgaaaagtaaagaatgttctaattactatctactggttaggtcgtgctgccaac
ggctgtacttcctacaacgggcccacgctggacctgaaagaatttgaaggcctgttgtca
cagatgcgaaaggaagcagaagaggcagagagcccaaaacgcaacatccgtgacagtggc
tacatcgactgctgggactctgagcgcagcgactctctttcaccaccacgacactgccga
gaggattcattcgacagcctggactccttcggctcacgttcacgtcagaccccgtcgcca
gacgtcccggtcacccacggcagcagtgatggccgcggcagtgactcagagtccgatggc
cctccccacaggaagatgccagatgtccgcaaagacgacatgtcggtgcggcggacctcg
gttactgagctgcggacccccctgcccttcaaccagtaccttcccaacaagagcaaccac
agcggatacatgcccacgccgcttcgcaagaaaatgaacgataaggacgaaggaaggaag
gacgaaggtcgtaagagttggagtaccgccacgtcccctgtagggggagacagaccgtgc
agtactccaactcgctcatgctcagaggaactcttccaacattcaacacctcttgctgca
aaggattcagcgtcccaagatgtgatcaccccagaaaaaaatgcacctgcgttgcagcag
gaagcgggatctgtgggaacggcggtgatcggtgccaaattagtgacaggacaagaagaa
tccttgacctcacctcagtgcaccagcaccccaagcccctcccacttcctcccagggtca
actggcttggcaacgactgctaaaagccgacagcagggacaagcgtggagtgagaatgag
gacccacggggaggtgcttcctggacagaatgcagtcttcgtgcaacagtcagctgcaca
ctcggtgtgtcagatgacgcacagagtgtgagtatgattgacatgcgtgcggaggaggag
accatcctgcagccccacagtcaggtgcgtcatgaactgatgcacaaccagtacaacaag
atgaaggaagaggaagaccactggcaggacgacttggccaggtggaagaaccgcaggagg
agtatttctcaggatctcatcaaaaaagaggaggagaggaagatgatggagcagttgctg
tcaggagacacctgcacctccgtgaggcgaagaagcattaagacctacagagagatcgtt
gctgacaaagagcgtcgtgagcaggagctgagagatgcatacagacgcgccagaacccca
gaggaggcgtcgtctgtcctccaaagatacgcccaacgtttttcaatcagtgaagccgtt
cttgaacagctgcagctaccaaagctcctggaccgcagcatatctgctgatcccacctac
ccctgctctcccttccctctctctgtttccccgtcctcctccccaactaccccggaccct
tttgacgcagaccccgaggggcccttgaggtatttgcgccagcagtctgcgccagcgcca
aagttcacgtcgacgtatgaggcgcggatcgaagagttcaccaaagactcctcacaacag
cgccctcaaatccgttctcgctcgtctgagccgccgactgctcgaggtctgtctcccaag
ccggtgcctttgctgatgcccaagccttaccttcaatctcgacccccagcagctgaacag
tggcccagcaaggcagatgggctgctccccatcaatggggaagttgttggtgtcaacacc
cagaccgcatcaccacagagccaaggaagggaatctcctcatttcctggcgtccccatcc
aaacactggaacaataatgcagaacctgctctatcagcggcctcgtcaactcacagtcct
cacgcctccattgaaggagaaaaccaagcatcagccaagaccgaggagactcgcacagaa
acgacttttgtccagcattcatcaccacccagccggcccaccacactcccatcggagctg
cacaagacacaggagagctttacaaagactagaagcagttcaggagctgctacaaaggaa
gaaaatgttaaactcgcagaccgacacgcacctccctcagaagccaaacaaggacaaaac
gaaaacgtatctcaacattttgccaatctggactcgtctggagtcagcacacagccaatg
acttcccaggcaagtgttactgcatcccagaggtcagaacaggacaaccacgaggtacca
agttcagctgcaccaggaagacttggacatcatccagcaatagaaaagacagagtttgca
aacggtgccacgtcttcgctggcaacctgcaatcccaaattacgttgggagttcttcgct
gcaccaggagaagcacaggagcaccgaggaaaccaggtgtcattcccggtgttaccccag
gccaggcagggtgaccgctggtcttgggacccggatgaggagcgaaagcgtcaggaaagg
tggcagcaagagcaggagcgcatgcttcaggagaagtaccaacgggagcaggaaaagctg
aaggaggagtgggaaaaggcacagagggaggtggcagaggaggagagaaagtaccatgaa
gaggaacgcaggattctggcggaaaccttgatgcctctgactccgtgctcctcaggtgta
accacctccagcagaggagaggcctcttccccctcagagccccaagataccatcgtccgt
tcactggctgactgggaacgcaagcaggaactgctggagaggcagtcgaggggcagcaca
gagaacgcagaacataaacagagaacaaatgacaggaccagtgacatcagcactgctgac
gacagcatgaaaacaggacgaagttcactgagtcagagcccctgcctgtccgacaccctg
cagaatggtcaaaaagctgctccggtatcacctaaatcctcgactgatgtgaagaaacaa
cagcccgtgatggacaacagcaagcaaatgcggcccgcagggacccgaaggattggtcca
gctgatagtaacaacacaggtcgcagctcatcaaagccccccgcatcatgtccgcctcct
ccagacacggtgcctccagcacccaacaggtctgttagtggtaaaaagctgtgttccagc
tgtgggcaccctttggggaagggggcagcgatgatcatagagaccctcagtctctacttc
cacattcactgctttaagtgtggggtgtgtaagggacagttgggcgacaccacgactggg
acagatgttcggatcaggaacggccttctcaactgccaccagtgctacatccgctcccgc
tctgccggccagccgaccacattgtga
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