Takifugu flavidus (sansaifugu): 130531314
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Entry
130531314 CDS
T09160
Symbol
pcdh10b
Name
(RefSeq) protocadherin-10b isoform X1
KO
K16499
protocadherin delta 2
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfs04515
]
130531314 (pcdh10b)
Cell adhesion molecules [BR:
tfs04515
]
Cadherins
Protocadherins
130531314 (pcdh10b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Ustilago_mating
Motif
Other DBs
NCBI-GeneID:
130531314
NCBI-ProteinID:
XP_056899239
LinkDB
All DBs
Position
9:13760850..13772860
Genome browser
AA seq
1022 aa
AA seq
DB search
MIVFLILLCITDGVLSQIRYSVPEEADHGTLVGNIAEDLGLDLTKLASRRFQVVPSSRTP
YLEVNLENGVLFVKEKIDREQICKQTATCQLNMEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITTNNYFYVDVQTQTDGNKFAE
LVLEKPLDREQQAAHRYVLTAVDGGQPPRTGTALLVVRVLDSNDNVPVFDQPVYTVSLSE
NAPVGTLVIQLNATDMDEGLNGEIVYSFSNHISNRVKDLFSIDPRTGRIEVRGEVDFEES
SLYQIFVQAKDLGPNAIPAHCKVLVKVSDVNDNAPEITFSTVTESVSEKAAPGTVIALLS
VTDKDAEENGQIHVELLGEVPFKLKSSFRNYFTIITDGPLNREQADSYSVTVVARDKGTP
SLATSKSIRVQVSDENDNSPTFTQSIYDVYVTENNVPGAYIHAVSALDPDAGQNALISYS
ILECNIQGMSVKTYVSINEETGYLYALRSFDYELLKDFTFMVQARDAGTPPLSSNATVKV
IIVDQNDNPPLVLAPLGKNGTAKEPLPRSAEPGYLVTRIVAMDADDGENARLSYSILRGN
ENGMFRMDWRTGELRTARRVSAKRDPHQLYDLMIEVRDHGQPPLSSSASIQVMLVDSVVE
GRGSGDRRGTTKAKDGSLDLTLILIIALGSVSFIFLLVMIVLAVRCQKDKKLNIYTCLTS
DCCMSCSSCCSRQGRARKKKLSKSDIMLVQSTGNVSGAGTAQVPVEESGSFGSHHQNQNY
CYQVCLTPESAKTDLMFLKPCSPSRSTDTDHNPCGAIVTGYTDQQPDIISNGSILSNETK
HQRTELTYLVDRPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDATNRGHSSGADLFSN
CTEECKALGHSDRCWMPSFMPSDGRQGPDYRSNLHVPGMDSVPDTEVFECPEQTADKSFS
TFGKETPLRQQHLHPHQNHHHLLKSPHLRRFQGSIERKELETFLPSARAPYKPAFLTRKR
VC
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgtttttgattttgttgtgcatcacggatggagtgctttctcagatacgttat
tctgtgccggaggaggcggaccatggcactctcgtcgggaatatcgccgaggacctcggc
ctagaccttaccaaactggcgtcccgacgattccaggttgtaccaagttctcggacaccc
taccttgaagtaaacctggagaatggcgtgctgtttgttaaagaaaaaatcgacagggag
cagatctgcaagcagaccgcgacctgtcagctcaacatggaagtcttcttggagaacccg
ctggaactgtttcgtgttgaaatagaagtggtggacattaacgacaacccgcctagcttc
ccggagacagacataacggtggagatctcagagagtgccaccccgggcactcgctttccg
ttggagagcgcattcgacccggacgtcggttctaacgcgttacgcacgtacgatatcacc
acaaacaactacttttatgttgacgtacagacgcaaacggacgggaacaagtttgcagaa
cttgtcctggaaaagccactcgatcgggaacagcaggctgcgcacaggtacgtactgact
gcggtggacggcggtcagccacctcggactggcaccgcgctcctggtagtcagagtgttg
gactccaacgacaacgtcccggttttcgaccagcccgtctacactgtcagcctgtcggag
aacgcaccggtgggcacgctggtcatacaactcaacgccaccgatatggacgagggatta
aacggggaaatcgtttattcgttcagtaaccacatttccaaccgcgtaaaggacctgttc
agcatagacccgcgcaccgggcgcatcgaggtgcgcggggaggtggatttcgaggagagc
agcctgtatcaaatcttcgtccaggccaaggacctggggccaaatgccatccccgcgcac
tgtaaagtcctcgtcaaagtgtccgacgtgaacgacaacgcgccggagattacattcagc
accgtcaccgagtcagtgagcgaaaaagcagctcccggcaccgtcatcgcgctgctgagt
gtgacggacaaggacgcagaggaaaatggacaaattcacgtggaactgctcggcgaagtc
cccttcaaattaaaatcctcctttaggaactacttcaccataataacagacggacctttg
aaccgggagcaggcagactcgtactccgtcaccgtggtcgcacgggataaagggacgccc
tctctggccaccagcaagtcgattcgagtccaagtgtccgacgagaacgacaactcaccc
acatttacgcagagcatatacgatgtgtatgtaacagagaacaacgtgccaggggcgtac
atacatgccgtctcggctctggaccccgacgccggacaaaatgcgctcatcagttactcc
atattagagtgcaacattcagggcatgtcggtcaaaacctacgtgtccatcaacgaagag
accggatatctgtatgcactcaggtcatttgattatgagctgctcaaggatttcacattc
atggtccaggccagagatgcaggcacccctccgctcagctccaacgccacggtcaaagtg
atcatcgtggatcagaacgacaaccctccgctggtgctggcccctctggggaagaacggc
acagccaaggagcccctgccccgctccgccgagccgggctacctggtcacccgcattgtg
gcaatggatgcagacgacggcgagaacgcgcgcctttcctacagtattttgagagggaat
gaaaacggcatgttcaggatggactggagaacaggggagctgcggacggcgaggcgcgtg
tcagccaagcgggatccccaccagctgtatgatttgatgattgaggtgagagatcacggc
cagccaccgttgtcctccagtgccagcattcaggtgatgctggtggacagcgtggtcgaa
ggccgcggcagcggagaccgtagaggcactacaaaggctaaggacggcagcctggatctc
accctcatactcatcattgccctgggctccgtctcttttatcttcctcctggtcatgatt
gtgctcgctgtgcgctgccagaaggacaaaaaactcaacatttacacttgtctgacgagc
gattgttgtatgagctgcagctcctgctgctcacggcagggacgtgctcgcaagaaaaag
ctcagcaagtcagatataatgctagtgcaaagcaccggcaatgtcagcggggccggtaca
gctcaagtcccagtagaagaatcagggagctttggctcacaccatcaaaaccagaactat
tgctaccaggtatgtttgactccagagtctgccaaaactgacctcatgttcctaaagccg
tgtagtccgtctaggagcacagacaccgatcacaatccatgtggtgccatagtgacaggg
tacacagaccagcagcctgacatcatatcaaatggcagcattttatcaaacgagaccaaa
caccagcgcactgaactcacctaccttgttgacaggccgagacgtgtcaacagctcagcc
tttcaggaggcagacctggtcagctctaaagacagcggtcatggcgacagcgagcaggga
gacagcgaccacgacgccaccaaccgtggccattcctctggtgctgatctcttctctaac
tgcactgaggagtgtaaggcgctgggccactctgaccgctgctggatgccaagcttcatg
ccttccgacgggcgccagggtcccgactaccgcagcaacctgcacgtgcccggcatggac
tcagtcccagacacagaggtatttgaatgccccgagcaaacggctgataagtcattctcc
acctttggcaaagagacgcccttaagacagcagcacctccacccccaccaaaaccaccac
catctcctcaaatctccccacctcagacgctttcaaggctccatagagaggaaagagttg
gaaacatttcttcctagcgccagagcaccttataagccagcttttttaacgaggaaaagg
gtttgctag
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