Takifugu flavidus (sansaifugu): 130531440
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Entry
130531440 CDS
T09160
Symbol
pcdh12
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-12
KO
K16499
protocadherin delta 2
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfs04515
]
130531440 (pcdh12)
Cell adhesion molecules [BR:
tfs04515
]
Cadherins
Protocadherins
130531440 (pcdh12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
TMEM154
DUF5527
Motif
Other DBs
NCBI-GeneID:
130531440
NCBI-ProteinID:
XP_056899446
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All DBs
Position
9:8401886..8410510
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AA seq
1172 aa
AA seq
DB search
MLLLLLLLSDLCCDVRASESTSVTLQYRVWEEQPSGTRVGCLVDDLRQRDEGGPFEDFQV
VEHQRALPFSVGARDGVLATQGRLDREELCRGSDLCEVAFSVLYRKSGAMNCLRVRVEVM
DQNDHSPQFPNAEQDVEISEIAGLRMRIPLERAVDPDAGPNGLQTYSLSVNRYFALDVTV
GPEGTKQAELVIIRELDREVQDSVDLILVAWDKGDPPRSGSTLIHVRIQDSNDNSPTFED
SAPTVELPENTARGTTIISLKATDPDQGVNGEVVYSLSKHTXPEVQRLIAVDPQTAAVSL
KAPLDYEVQTSYEVVVEARDRGPNAIPAYCKLHIKLLDVNDNAPRILADWDRSSFPGPTV
LEGAPKDTFLSLVTVLDADSGQNGKVKAQILEGSGPFRLKHMQGGNYMIVTNGTLDREQV
TWYNLTLLAQDYGDPPLSSVKHMSVQVVDENDNAPVFSTNIYKASFEETNRTGYQMLKVE
AHDVDLDLSGRVSYFIRNVTGADVDAYFSIHQTSGVIRAQHRLDYEESRSHSFIVEAIDQ
GHPPLSSSATVQIQVQDVNDNYPVIKEPKPRKGVASLSVPVNADKGEIVTELGTHLDGTA
ASFPVDPRTRSGFLASTIKAEDADSGPNGALSYRIAKGNHNRLFWLHEATGQLFVNATNA
TQLIGQNFKLDIAVSDMGSPRLTTTMTLEVTFINLRDHLKNSSPGARGQLSFTMMVAICL
GATCLLLLLTIALVTTLCRPEKRDNRAYNCRQAESTYTRHPRRPQKNIRKSDIQLIPVVR
GRKDEPPPDDSESQLLPTSSLMSEDQKMGREYTPAPSALNSSFHSQGRPEVDASPPQHSR
SLLKPGTIELDGTLPHKSRNSSSSSTRSRTPKVQTHPDDPAEGPACSSSQATLRRPKNSE
SGGSDAEHQRMLRSLVRLSMAAFGDSIQLSSASPEVQQISQLLSLLHQGQLQPRTNFRGN
KYSHRRYGGQDCSDWQSAKDSGHGESEAGDVDWEPGRESPVDPQLDEGLNNLLNTDDLFA
DVGDPAWMARLSLPLATDYHDNVFIPNGPPSPEGGFLPRDVLDSSSFSTFGKSPDKDGPL
GGALLSEVSTLFEMLMTQKADAHPGPPPDVLYRLSAAYRRSLGLDGSGTTAAAKAARNSG
NAEQRPAVAPPTGRPQGGATAEAEHWKRLKGF
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctcctgcttctgctctcggatctgtgttgtgatgttcgcgcctcggagtcg
acgtcggtcaccctccagtaccgcgtttgggaggagcagccctcaggaacccgggtcggc
tgtctggtggatgaccttcgacagagggatgaaggtgggccttttgaggatttccaggtg
gtggagcaccagagagcccttcccttctctgtcggcgctcgggacggggtgctcgccacc
caaggtcggctggacagggaggagctatgccggggatccgacctttgcgaggtagccttc
agcgttctctacaggaagagcggtgccatgaactgcctgagggttcgagtggaggtgatg
gaccagaatgaccacagcccacaattcccaaacgcagaacaggacgtggagatctcggag
atagccgggctcaggatgcggatccccctggaacgcgcggtggatcccgacgcggggccg
aatgggctccagacctactcgctgtccgttaaccgatactttgctctggatgtaacagtc
ggtcctgaaggaacaaagcaggcagagttagtgatcatcagagagttggatcgggaggtc
caggattcggttgacctcatcttggtggcgtgggataaaggcgacccccccagatccggc
agcaccttaatccacgttcgcatccaagactcaaacgacaacagtcccacatttgaggac
agcgcgcccacggtggagctgcccgagaacacggcacgtgggaccaccatcatcagcctg
aaggccactgacccggaccagggagtcaacggagaggtcgtgtattcgctcagcaagcac
acgncacccgaggttcagaggctcatcgctgtggatccacaaacggcagctgtgagtctc
aaagcgcctctggactacgaagtccagacctcctacgaggttgtggttgaagcccgtgat
cgtggccccaacgccatccccgcatactgcaaactgcacattaagctcttggacgtgaac
gacaacgcaccgaggatcctcgccgactgggatcggtccagttttccggggccgaccgtg
ctggaaggagcacccaaagacaccttcctctccctggtgacggttttggacgcagattca
ggacaaaacggcaaagtgaaagctcaaatcctcgaaggttccggccctttccgtcttaaa
cacatgcaaggtggaaactacatgattgttaccaacggcaccttggaccgagagcaggta
acctggtataacctcaccctcctggctcaggactacggagatccaccactgtccagcgtg
aaacacatgtctgtccaggtggtggacgagaacgataacgctcccgtgttctccacaaac
atctacaaggcttcctttgaagaaaccaacaggacggggtatcagatgctcaaggtcgag
gcccacgacgttgacctggacctcagtgggagggtgtcttatttcatacgcaatgtcacc
ggcgccgatgtcgacgcgtacttctccatccaccagaccagcggtgtgatccgtgcccag
catcgtctcgactacgaggagtcccgctcccactctttcatcgtggaggccatcgaccag
ggtcacccgccgctcagcagctccgccaccgtccagatccaggtccaggacgtaaacgac
aactacccggtcatcaaggagcctaaacccagaaagggcgtggcttctcttagcgtacct
gtcaatgcagacaagggggagatcgtgactgagctgggaactcacctggacggaacggcc
gccagttttcctgtggatccccgcaccagaagcgggttccttgcttccaccataaaagcc
gaagatgcagactctggacccaacggggcgctgagttaccgcatcgccaagggaaaccac
aaccgactcttctggctgcacgaggctacggggcagctctttgtgaacgccaccaacgcc
actcagttgattggacagaacttcaagctagatattgccgtctctgacatgggaagtccc
cgtttgaccaccaccatgaccctggaggtgacctttatcaatctcagggaccatttgaag
aactcatctccaggtgcccggggacagctcagcttcaccatgatggtggccatctgcctg
ggagccacgtgtttgctcctcctgctgaccattgctttggtgacaaccttatgtcgcccg
gagaaacgggacaaccgggcctacaactgcaggcaggcggagtccacgtacacccgccac
ccacggcgcccacagaagaacatcaggaagtcagatatccaactgattcccgttgtcaga
gggcggaaagatgagcctcctccggatgatagtgagtctcagctgctgccgacctccagt
ttgatgtcagaagatcagaaaatggggagagagtacactccggcgccttccgccttaaac
agcagcttccactcccagggtcgtccagaggtcgatgccagtccaccgcagcacagcagg
agtcttctcaaacctggaaccatcgagcttgatggcactttgcctcacaaatccaggaac
tcctcatcgtcttccacacgttccaggactccgaaggtccagacccaccccgacgacccc
gcggagggaccggcgtgctcgtccagccaggcgactctgcgccgccccaagaactccgag
agcggagggagtgacgccgagcatcagcggatgctgcgaagcctggttcgactctccatg
gcggcgtttggagactccatccagctctcgtctgcttccccagaggtgcagcagatctcc
cagcttctctccctcctgcatcagggtcaactgcaaccaaggaccaacttcagggggaac
aagtactcccaccgcaggtatgggggtcaggactgctccgactggcagagcgccaaggac
agcgggcacggcgagagcgaggccggagacgtggactgggaaccgggaagagagtcgccg
gtggatcctcagctggacgagggcctcaacaacctgctcaacacagacgatctcttcgca
gatgtcggcgatccggcctggatggccaggctgtcgctcccgctcgccaccgattaccac
gacaacgtcttcatccccaacgggcctccgtccccggagggcgggttccttccccgggac
gtcctggactcctcgtccttctccaccttcggtaaaagtccggacaaggacggcccactg
ggcggagccctgctgtctgaggtcagcaccctctttgaaatgctgatgacgcagaaggcc
gacgcccacccgggcccgccaccggacgtcctgtaccggctctccgcggcgtaccgtcgc
tcgttgggcctggatggcagcggcaccacggctgcagccaaggcagcaaggaactctggg
aatgctgagcagaggccggcggtagctccgcccacagggcgaccacagggcggggctacg
gctgaggctgaacactggaaaagactgaaggggttttag
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