Takifugu flavidus (sansaifugu): 130531861
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Entry
130531861 CDS
T09160
Symbol
si:ch211-114c17.1
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfs03041
]
130531861 (si:ch211-114c17.1)
Spliceosome [BR:
tfs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130531861 (si:ch211-114c17.1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_16
TPR_2
TPR_12
TPR_MalT
TPR_11
GAT
COX5A
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
130531861
NCBI-ProteinID:
XP_056900014
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All DBs
Position
9:complement(11655756..11660729)
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AA seq
725 aa
AA seq
DB search
MAAEGCEEMSGNGELEDSSAMEMSEVAEAPLTGTEEMSEKNGTATEVPEAPVCAEPDSVS
THLAAEDVDKGLPADFERLWTAANDNPQDFTSWTDLLQYCEQEGNITASRRALESFLVRY
PLCYGYWKKFADIERRAGYNDRAEQVCVQGLQVIPLSVDLWIHYINLLLGTLDMNLPESP
PRIRGVFEDAVRAAGLDFHSDRLWDLYVEWEKEQGNMRNATAVLDRVLKVPTQLYNTHYD
KFKEHLNNNEPKEILSPEEYEELRASCRQSQKADCAEQTQEEKQETPPGEEKPTTPEGLD
TEELKQKIREKVSLQREKVYQENEDEVRKRWHYEDAIKRPYFHVKPLDHLQLQAWHSYLD
WEIAELNKDASQSSQEAQQSSTEESEPTAQPQEPLEEVTGHRDDHRVRVLFERCLIACAL
YEEFWTRYTRYLESHNVEEARAVFKRACEIHLTRRPNICMQWATFEERHGNLSEARRVLE
TIEETVPGLAVVRLRRVALERRAGQLERSEALLQEAVAGSKEKPTLHAFYSIKLARLLLK
LGRNPSKARTVLQEALEISPNNDKLHINLLEVEVSGDTWASDEVVQECVTRALAAPLTPQ
TKILLSQRGLQFAEDYSNSIQSVLSLYEGHQKLLQDLGGTKRGAENGEEDAEKLGKGDED
AAVAVSAEASQTMPQVPITTPPPPVTDMSGQAAYGGYSSWYQQPQYGNYGYHNTWNYNQG
YYPTS
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaaggttgtgaggagatgagcggcaatggagagcttgaagactcttcggcc
atggagatgtctgaagttgctgaagcccctcttactggaacggaagaaatgtcagagaaa
aatggaactgccacggaggttcctgaggcccctgtctgtgcggagcctgattctgtctcc
acacacctagctgcagaggacgtggacaaaggactacctgctgactttgaacgtttgtgg
acggctgccaatgacaatcctcaagacttcacaagctggactgacctgctgcaatactgt
gagcaagaggggaacatcactgcgtcacgcagagcactagagagcttcctggtgcgctac
ccactttgctacggctactggaagaaatttgctgatattgagcgccgagctggatacaac
gatagagcagagcaggtgtgtgttcagggtctgcaggtaatcccgctcagtgtcgatctg
tggatccactatatcaatctgctgctgggaacactcgatatgaacctgcctgagtcgccc
ccacggattcgcggtgtgtttgaggatgcagtccgggcagcaggtctggacttccactca
gaccggctttgggatctttatgttgagtgggaaaaagagcagggaaacatgaggaatgcc
accgctgtcctggacagggtcctcaaagttcccactcagctctacaacactcactatgac
aagtttaaagaacacctgaacaacaatgagcctaaagagatcctttctccagaggagtat
gaggagctgagggcatcatgccggcaaagccagaaggccgactgtgctgaacaaacacag
gaggagaagcaagagacgccacccggggaggaaaagcccaccacccctgagggcctggac
acggaggaattgaagcagaagatcagggaaaaagtgtcgcttcagagggaaaaggtgtac
caagaaaatgaggacgaggtccgcaagagatggcactatgaagatgctatcaaacgtcca
tacttccatgttaagccactggaccacctccagctgcaggcctggcactcctatctggac
tgggagattgccgagctgaacaaagacgctagtcagtccagtcaagaggcacaacagtca
tccacagaggagtcggagcctacagcccagcctcaggagccattagaagaggtcaccggt
caccgtgacgaccacagggtccgcgtactttttgagcgctgcctcattgcctgtgccctg
tatgaggagttctggaccaggtacactcggtacctggagtcacacaatgtcgaggaggcg
cgagcggtctttaaacgagcctgtgagatccacctgacgcgcagacccaacatctgcatg
cagtgggccaccttcgaggagaggcacggtaacttgagcgaggctcgacgggtgttggag
acaatagaggaaaccgtgccggggttggctgtagtccgtctgcgcagggtggctttggag
agaagagccggccagctggagcgatcggaggctttgctgcaggaggctgtggctggatcc
aaagagaagcccaccttacacgccttttactctataaagctggctcgtttgctgctgaaa
ctgggcaggaaccccagcaaagcccgcacggtcctacaggaggctttagagatcagtccg
aataatgataaactccatattaacctgttggaggtagaagtgtcaggagacacctgggcc
tctgatgaggtggtgcaggagtgtgttacgcgagctctggctgctcccctcaccccacaa
actaagatccttctgtcacagagaggcctccaatttgctgaagattacagcaactcaatc
cagagtgttctctctttgtatgaaggccaccagaaactgctgcaggatctgggtggaaca
aaaagaggagcagagaacggggaggaagacgcagagaaactcgggaaaggtgacgaagat
gcggctgttgctgtgtctgcagaagcctcgcagaccatgcctcaggtccccatcacaaca
ccccctcccccggtgactgacatgagcggacaggctgcgtacgggggatacagcagctgg
taccagcagccccagtatggcaactatggctaccataacacctggaactacaaccagggt
tattatcctaccagctag
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