KEGG   Takifugu flavidus (sansaifugu): 130531881
Entry
130531881         CDS       T09160                                 
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
tfs  Takifugu flavidus (sansaifugu)
Pathway
tfs03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    130531881 (pcdh20)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tfs01009]
    130531881 (pcdh20)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:tfs04515]
    130531881 (pcdh20)
Protein phosphatases and associated proteins [BR:tfs01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     130531881 (pcdh20)
Cell adhesion molecules [BR:tfs04515]
 Cadherins
  Protocadherins
   130531881 (pcdh20)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_CELSR2_9th
Other DBs
NCBI-GeneID: 130531881
NCBI-ProteinID: XP_056900037
LinkDB
Position
9:complement(1405055..1407948)
AA seq 858 aa
MGHGIPHNMNQAGLLQNLLIVIHLQHIICDSIGFSIPEEQEPNTLVGSLNRLLPPPYQLL
TPEFLWMDKNTGDFYTTEKKLDREALCPEETKAEQCIILLTAVVGPSGDLLQFPVIIEDI
NDNVPHFENSKIHLWVSEDVTVGTSLLLDVQAQDKDAGRNGEVHYRLEDPDGVFGLTFLG
DGPVVALVVQTAIDRETRDFYEIKLEAIDRGSDPLSATATLIVTVTDVDDNCPSFSPAGP
RSVAIPGDSPRNMLVAQVRAIDPDSGPNAAIIYSLSPKVSERAKKLFSLDSLTGDIRLAQ
DLQSDNSEELLLKVLASSQHCPPADTLVTVSILPEAYRELTIKIGFIGEHQRGTMVLPEN
QPPTALAILELQGDNSFISSSLAIENKVPFSLSPQNGKYLLSTSKPLDHEMKRDYNISVV
AQGTSADGSAVAPSRHIYRVMVADVNDNAPVFPESHYQLEAQENNRPGTTLLRVSAWDVD
DGHNGRVTYRLGNHTPTVFSIDPVTGQLSASASLDREQQGAHVITVFARDSGSPPLESVA
TVSIRVLDQNDNAPVFVTPHFIFFVPEDAPLLAEVGAVSVTDPDEGANGDTEMFLKNSSG
PFVVDRTKGILHITTHLDRETEQRYELYLLARDRGYPSALTSTARVTIFVEDVNDNPPRV
ILPSSNSCLTVPTGTIAGTVVTRIYAMDEDSGLNSEITYTLAASKPAQSTGPFKVDSRSG
NITITERLLQKDLGMHHLFIVVRDGGKPAPLYTTVWINLLVNDSTEPCLLTRAPTLTGTL
DFVLNPSKAPICEAEDIKYPQLMLLAGLGMMLASTCLFVATAVLYLKRKRGSSQRNKSGC
TDEKEIPLSLKSRYHFDD
NT seq 2577 nt   +upstreamnt  +downstreamnt
atgggccatgggattcctcataatatgaaccaagctggattactgcagaacctgctgatt
gttatccatctccagcacatcatatgtgattctattgggttttccatcccagaagagcag
gagcctaacactctggtagggtcactcaatagactccttccacctccgtaccagctcctg
actccagagtttctgtggatggacaaaaacacgggcgacttctacaccactgagaaaaag
ctggaccgggaagctctctgccccgaggagacaaaagctgagcagtgcattattctgctc
actgctgttgtgggaccctcaggagaccttttacagtttcctgtgatcatagaagacatc
aatgacaatgtgcctcattttgaaaacagcaaaatacacctctgggtgtctgaggatgta
acagtggggaccagtttattattagacgtccaggctcaggacaaagatgctggtcgtaat
ggcgaggtgcattaccgcctcgaagaccctgatggagttttcggtttaacattcctgggc
gacgggcctgtcgtcgcgctggttgtgcaaacagcgatagacagagagactcgggatttc
tacgaaataaagctggaggccatcgaccgcggctcagaccctttgagcgcgacggcaact
ttgatagtcacagtgacagatgttgacgacaactgtccaagcttcagccctgccggcccc
cgcagtgtcgctatccccggagactccccgaggaacatgttggtggctcaggtcagagcc
atagacccagattcaggccctaatgctgccatcatttactccctcagtcccaaagtctct
gagcgggccaagaagctgtttagccttgacagcctcactggagacatcagactagcacaa
gacctccagagtgacaactcagaggagcttctattgaaagtgttagccagtagccagcac
tgccccccagcagacactctagtaaccgtatccatcctccccgaggcctaccgagagctg
acgattaagattggattcataggtgaacatcaaagggggactatggtgttaccagagaac
cagccccccactgccttagccattttagagctgcagggtgacaacagctttataagctca
tcgcttgccattgagaacaaagtgcctttcagtttgagccctcagaatggtaaatatctg
ctttccacatcaaagcctctcgaccatgagatgaaaagggactataatatttccgtggta
gcgcagggaacatcagcagacggctctgcagtcgctccttccaggcatatatacagggtg
atggtggcagatgtcaatgataatgccccagttttcccagagtcccactatcagcttgag
gcgcaggaaaacaaccgtccagggacgacgctgttgcgcgtctcagcctgggacgttgac
gatggacacaacgggagggtgacctacagactgggtaatcacacacccacagtgttcagc
attgaccctgtgacaggtcaactgtctgcatcagcctctctggatagagagcagcagggt
gcgcacgtgatcaccgtgtttgcacgagacagtggctctcctcctctagagtcagtggct
acggtgtccatccgagttctggaccagaatgacaacgcgcctgtttttgtgacgcctcac
ttcatctttttcgtccctgaagatgcgcctctgctcgctgaggtgggggccgtaagtgtg
acggacccggatgagggagcgaacggagacacggagatgttccttaaaaacagcagcggg
cctttcgttgtggatcgcaccaaggggattcttcacattacaacgcatttggaccgcgag
acagagcagcgctatgaactgtacctgctggcgcgcgatcgtgggtatccaagtgctctg
acttccaccgcgagggtgaccatcttcgtggaagacgtcaacgacaacccaccgagagtg
atccttcctagcagcaactcctgcctgactgtcccaacaggtacaatcgcgggcaccgtg
gtgacgagaatctatgccatggacgaggactcgggtttaaattccgagatcacgtacacc
ttggcggcttcgaaacctgcgcaaagcaccggtcccttcaaagtggattcgaggtcaggg
aacatcacaataactgagcgacttctacagaaggatttgggaatgcatcatctgttcatt
gtggtcagagacggaggaaaaccggctccgctgtatacgaccgtctggattaatctttta
gtcaatgacagcacggagccttgcctcttgaccagagcgcccaccttgacagggacactt
gactttgtcctaaacccctcaaaggcccccatctgtgaggcggaggacatcaaatatcct
cagctgatgctcttagccggccttggaatgatgctcgcatccacgtgcttgtttgtggcc
acagctgttttatatctgaaacgcaagagagggagctcacagcgaaacaagagtgggtgc
acagatgagaaggaaattccactcagcctcaaaagccgatatcactttgatgactaa

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