KEGG   Takifugu flavidus (sansaifugu): 130532087
Entry
130532087         CDS       T09160                                 
Symbol
dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
tfs  Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tfs03009]
    130532087 (dcaf13)
   04121 Ubiquitin system [BR:tfs04121]
    130532087 (dcaf13)
Ribosome biogenesis [BR:tfs03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    130532087 (dcaf13)
Ubiquitin system [BR:tfs04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     130532087 (dcaf13)
SSDB
Motif
Pfam: Beta-prop_WDR5 Sof1 Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_Gbeta Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin WD40_RFWD3 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st eIF2A Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N ANAPC4_WD40 KNTC1_N MIOS_WD40 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_NUP159_NUP214 NBCH_WD40 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 130532087
NCBI-ProteinID: XP_056900375
LinkDB
Position
10:8800749..8806015
AA seq 445 aa
MKVKVISRNPDDYVRETKYDIQRVPRNYDPTLHPFEVCREYTRALNATKLDRVFAKPFLA
SLDGHRDGVNCMAKHATSLSTLLSGSCDGEVKVWNLTKHECVRTLQAHEGFVRGMVVRFC
GTSFFTVGDDKTIKQWKMEAPGYGEEEEPINTILGKTVFTGLDHHREEGLFATCGQQVDI
WDEQRSSPIRSFTWGVDSFSSVHFNPVETELLASCASDRSIVLYDMRESTPLKKVIMTMR
SNTLCWNPMEAYYFTASNEDYNLYTYDMRYLEKPIMVHMDHVSAVLDVDYSPTGKEFVSA
SFDKTIRIFPKDSDRSREVYHTKRMQHVICVKWSADSKYVLSGSDEMNIRLWKANASEKL
GVLSLREKQAINYNQKLREKFQYHPQVRRITKHRHLPKALHHQRKELQVMKEARRRKERN
VRKHSKPGSVPVVSEKEKHIVAVLE
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgaaggttaaggtcatttctaggaacccagacgattatgttagggaaactaaatatgat
attcagcgcgttcctagaaactatgacccaacactccatccgtttgaggtgtgcagagaa
tatacgagggcactgaatgccaccaagctcgatagggtctttgccaagcctttcctggcc
tccctggatggacacagagatggggtaaactgcatggctaagcacgccacaagtctgtcc
actttgctgtcaggctcctgcgatggggaggtaaaagtctggaatctgactaagcatgaa
tgtgtccgaacgctacaagcacatgaaggatttgtccgggggatggttgtacgcttttgt
ggaacatcattctttacggttggcgatgacaaaacaatcaagcagtggaaaatggaagcc
ccgggttatggagaggaagaggagcctatcaacacaattcttggcaagacagtgtttaca
ggcctggaccatcaccgggaggagggtttattcgctacctgtggccagcaggtggacatc
tgggatgagcagaggagcagccccatccgctcgttcacctggggcgtggacagcttcagc
tctgtccacttcaatccagtggaaactgaacttcttgcaagctgtgcctcagacagaagt
atagtgctgtatgacatgagagaatcaacaccgcttaaaaaggtgataatgacgatgagg
agcaacacactgtgctggaaccccatggaagcctattacttcacagcttcaaatgaggac
tacaatctgtacacgtatgacatgaggtatctggagaagccaatcatggtgcacatggac
cacgtctctgctgtgctggatgtggattattctcccaccgggaaggagtttgtgtccgcc
agctttgacaaaaccatccgcatcttccccaaggattccgaccgcagcagggaggtttac
cacaccaaacgcatgcagcatgtcatctgcgtcaagtggtctgcagacagtaaatacgtt
ctgagcggctcggatgaaatgaacatccgactctggaaggccaacgcgtcggagaagctg
ggagtgctgtccctcagagagaagcaggccatcaactacaaccagaagctgagggagaag
ttccagtaccacccgcaggtcagacgcatcaccaagcaccgacaccttcccaaggccctc
caccaccagaggaaggagctgcaggtcatgaaagaggctcgccgcaggaaagagagaaat
gtgcgcaaacacagcaaaccaggaagcgttcctgtggtgtctgagaaggagaaacacatc
gtggctgtgctggaatag

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