Takifugu flavidus (sansaifugu): 130532396
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Entry
130532396 CDS
T09160
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfs03016
]
130532396 (cdkal1)
Enzymes [BR:
tfs01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
130532396 (cdkal1)
Transfer RNA biogenesis [BR:
tfs03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
130532396 (cdkal1)
Prokaryotic type
Methylthiotransferases
130532396 (cdkal1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
TRAM
Motif
Other DBs
NCBI-GeneID:
130532396
NCBI-ProteinID:
XP_056901021
LinkDB
All DBs
Position
10:5107210..5245889
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AA seq
563 aa
AA seq
DB search
MPSACDSAIEDIEDMVSFNDPTPQDRQSARKRIIPRSRKKNVEHEELQADSLIPGTQKIW
MKTWGCSHNNSDGEYMAGQLAASGYKITDDPIEADLWLLNSCTVKNPAEDHFRNSIKKAQ
EQQKKVVVAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDGGR
RLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERTRQSFQ
EGVCEIWLTSEDTGAYGRDIGTDLPTLLWRLVEEIPEGAMLRLGMTNPPYILEHLEEMAK
ILSHPRVYAFLHVPVQSASDSVLMDMKREYCVGDFKRVVDFLKERVPGVTIATDIICGFP
GETEEDFQETLDLVKLYQFPSLFINQFYPRPGTPAAKMEQVPAHIKKQRTKELSQLFHSY
HPYDHKVGERQQVLVTEESFDGQYYVAHNKFYEQVLVPKRAEFKGKMVEVDIYEAGKHFM
KGGPVEDSQPFTPSIAVPLQKGEVSGLTQEHTANGVHSRPSPLSFLWNGSASLDREVLKK
LAIGLALTAALLAFIVEKLCAWS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgcgtgtgactctgcgattgaagacattgaggacatggtgtcttttaatgac
ccgacaccgcaggatagacagtctgctcgaaaaaggatcataccaaggtccagaaagaaa
aacgtagaacacgaggagctccaagccgacagtttgatccctggcacccaaaaaatctgg
atgaaaacctgggggtgtagccacaacaactctgatggcgagtacatggctggacagctc
gctgctagtggatacaagataacagatgacccgatagaagcagacctgtggttgctcaac
agctgcacagtgaaaaacccggcagaagaccacttcagaaactctatcaaaaaagcccag
gaacagcagaagaaagtggtcgtagcaggttgcgttccccaagctcagcccagaatggac
tacctcaaaggactcagcatcatcggggtccagcagattgatcgggtggtggaggttgtg
gatgaggctgtgaaaggtcactctgttcgtctattgggacagaagaaagatggaggtcgg
agacttggaggtgccagactggacctgcccaagatcaggaagaaccctctcattgaaatc
atctcaattaacactgggtgtctaaacgcgtgcacctattgtaagactaagcatgcacga
ggagacctggccagctatcccattgaggaactcgtagagagaacaaggcagtctttccaa
gagggggtgtgtgagatctggttgaccagcgaggacacgggagcttacggcagagacata
ggaacagatctgcccacattgctgtggaggctggtggaagagattcctgaaggggcaatg
ctgaggctcggcatgaccaaccctccatacatcctggaacacctggaggagatggctaag
atcctcagtcatccacgagtttacgccttcctccacgtccctgtgcagtcagcttcagac
agcgtcctgatggacatgaagagggaatattgtgtcggcgacttcaaaagagtggtggac
ttcctaaaggagagagtccccggtgtaaccattgccacggacataatttgtggctttcct
ggtgagacagaggaagacttccaggagacgctggacctggtgaagctctaccagttcccc
agtctgttcatcaaccagttctaccccagacctggtacgcctgcagccaagatggagcaa
gtaccagcgcacataaaaaagcagaggacgaaagaactatcgcagctcttccactcatac
cacccttacgaccacaaggttggggagaggcagcaggtgctggtgaccgaggagtctttt
gatggccagtactacgtggctcacaacaagttctatgaacaggttctggtgccgaagaga
gcggagttcaaagggaagatggttgaggtggacatctatgaggctggcaagcacttcatg
aaaggtggaccagtagaggacagtcagcctttcaccccctccatcgctgtgccacttcaa
aaaggggaagtctcaggcctgacccaggaacacacggccaacggtgtccacagtcgtcca
tctcctctgtcctttttatggaacggctctgccagtctggaccgggaggtgctgaagaag
ctcgccatcgggctggcgctgacggcagccctactggcctttatagtagagaaactgtgt
gcatggagctga
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