Takifugu flavidus (sansaifugu): 130532613
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Entry
130532613 CDS
T09160
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-B-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03013
Nucleocytoplasmic transport
tfs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130532613
03015 mRNA surveillance pathway
130532613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130532613
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130532613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
RRM_3
RBD_AKAP-17A
Macoilin
PAP1
Motif
Other DBs
NCBI-GeneID:
130532613
NCBI-ProteinID:
XP_056901328
LinkDB
All DBs
Position
1:19661830..19665192
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AA seq
366 aa
AA seq
DB search
MLTPELMPTRKRARMSISNDLASLQVSTNTAPITRKELFRRRELFLPRRTAIGPPSKAPK
KPPREKADTIKVQTKVSWVVSKAVPQRSTQLELIKFWMAPSPTKKKEEEKNKLRGKEKSA
GAKEVADKARGREKTRTRHSASSGSSRSSSSSSSGSSSGSSSGSSSSSSSSSRSSSSSSS
SSSSSPSPSRQRHNRRRSRSKSKSAKRDDRERRRRSPTPKPTKIHLGRLTRNVIKEHIQE
IFSTYGKIKMIDMPLNRIYPHLSKCYAYVEYETPEEAEKALKHMDGGQIDGQEITVTAVL
TPTVRPPPRRLSPPRRLPPPPPMWRRTPPRMRRRSRSPRRRSPIRRRSRSPGRRRHRSRS
SSNSSR
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgctcactcccgaattgatgccgaccagaaagcgagccaggatgagcatctcgaacgat
ttggcgagcctgcaggttagcaccaatacagcaccgatcacgaggaaggagttattcagg
aggagagagctctttctcccgaggcggactgccatcggtcctccaagcaaggctccgaag
aagccccccagggagaaagctgatacaataaaggtccagacgaaggtcagctgggtggtc
tccaaagcggtaccccagcgctccacacagctggaattgataaaattctggatggcgccc
tccccaacaaagaagaaagaagaggagaaaaataaactgagaggaaaagagaagtcggca
ggtgcgaaagaagtggctgacaaggcccgaggccgggagaagactcgcactcgacacagt
gcttccagtggtagcagcaggtccagctccagcagcagctcaggctccagctcaggctcc
tccagtggctcaagttcttcaagctcttcgagctctcgctcctcatcttcctcctcgtcc
tcatcctcttcctcgcccagcccgagccggcagcgccacaacaggcgacgctcgcgttcc
aagtcaaagtcagcaaagagggatgacagagaacggcgacgcaggagccccacacccaaa
cccactaagatccacctgggccgcttgaccagaaatgttataaaggagcacatccaggag
atcttctccacttatggtaagatcaagatgatcgacatgccattgaaccgcatctaccct
cacctgtccaaatgctatgcgtatgtggagtatgagactccggaggaggcggagaaggcg
ctcaaacacatggatggaggtcagattgacggtcaggagatcacagtcacggctgtgctc
actcccaccgtgcgcccccctccccgtaggctgtccccgcctcgcaggttacctcccccg
ccacccatgtggcgacgcaccccgccccgcatgagaagaaggtctcggtcaccccgccga
cgctctccaatccgccgcaggtctcggtctcccggacgccgccgtcatcgctcacgatcc
agctccaactcatctcgctag
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