Takifugu flavidus (sansaifugu): 130532632
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Entry
130532632 CDS
T09160
Symbol
snx27b
Name
(RefSeq) sorting nexin-27b isoform X1
KO
K17936
sorting nexin-27
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130532632 (snx27b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tfs04990
]
130532632 (snx27b)
Membrane trafficking [BR:
tfs04131
]
Protein recycling
Others
Others
130532632 (snx27b)
Domain-containing proteins not elsewhere classified [BR:
tfs04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
130532632 (snx27b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
RA_2
SNX17-27-31_F1_FERM
PDZ_2
SNX17_FERM_C
VirE3
USP7_C2
SNX17-31_F2_FERM
DUF5394
Motif
Other DBs
NCBI-GeneID:
130532632
NCBI-ProteinID:
XP_056901343
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Position
10:complement(1911844..1918206)
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AA seq
571 aa
AA seq
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MADVEGQGICSLPPPLPHPSTLTCSSSGNVTPGTGSSCQTATTVTSGPRLVRIVKSDSGY
GFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGAT
HKQVVDLIRAGERELVLAVLSVPPQEADCLDPGDDVSAQSCYDYSDKQAVPISVPSYKHT
ELNQEKFVVYNVYMAGRQLCSKRYREFVILHQNLKREFDNFTFPKLPGKWPFSLSEQQLD
ARRRGLEEYLEKVCSVRVIGESDIMQEFLSDSDENYNGVSDVELRIAMPDKTTLNVRVRK
NATTDQVYQAVVMKLGMDSVTSSYFALFEVINHTFVRKLAPNEFPHKLYVQNYTSAVPGT
CLTMRKWLFTTEEEVLLNDNQLAVSYFFHQAVEDVKKGSVKSEQKFYQLQKLAEQKKMAA
YLSLLRGCEGYNEIIFPHCSCDSRRKGHVIAAISIHHFKLHACTEEGTLENQVIAFDWAE
MQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEIEEEATD
KDNKNCSKDEYFPTPEAQKGWKHLGREIATS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgtcgagggacaaggaatttgttcactgccccctccgttgcctcacccttcg
actcttacgtgctccagcagcggtaatgttacgccaggtaccggcagcagctgccagacg
gccaccaccgttacttcaggcccgcggctggtacggatagtaaagtccgactccggttac
ggtttcaatgttcggggacaagtgagcgaaggtggtcagcttcgcagcattaacggggaa
ctctacgctccactgcagcatgttagtgctgttttacccggaggtgccgccgacagagcc
ggtatttctaaaggggacaggatccttgaagtaaatggagtaaatgtagaaggtgcaaca
cacaagcaggtggtggacctgatccgggccggagagcgggagctggtgctggctgtgttg
tctgtcccgcctcaggaggccgactgtctggatccgggagatgacgtgtccgcccagtcc
tgctacgactactccgacaagcaggctgtccccatctccgtacccagttacaaacacact
gagctcaaccaggaaaagtttgtggtgtacaacgtgtacatggcaggtcggcagctatgc
tccaagcgttaccgggaatttgtgattctgcaccaaaacctgaaaagggaatttgacaac
ttcacatttccaaaactgcctgggaagtggcccttttccctgtcagagcaacagctcgat
gcacgacgcagaggccttgaagaatacctggaaaaagtgtgctcagtacgggtcattgga
gaaagtgacatcatgcaggagttcctgtcggactcagatgagaactataacggcgtgtcg
gacgtggagttgagaatagccatgcctgataaaaccaccctcaacgtccgggttcgcaag
aacgccaccacggaccaggtgtaccaggctgtggtgatgaagctgggcatggacagcgtg
acgtccagctactttgccctgtttgaagtcatcaaccacacgtttgtgcgtaaactcgct
ccaaacgagttcccgcacaaactgtacgtccagaactacacctcagccgtcccaggaacc
tgtctgaccatgcgcaagtggctctttaccacagaagaggaggttctgctcaacgacaac
cagctcgctgtcagttacttctttcaccaggccgtggaggatgtgaaaaagggatctgtc
aagtcggagcagaagttctaccagctgcagaagctggccgagcagaaaaagatggcggcg
tatctgagtttattgagaggctgcgagggctacaacgagatcatcttcccccactgctcc
tgcgactcccggcgtaaaggccacgtcatcgccgccatcagcattcaccacttcaagctg
cacgcctgcaccgaggaaggaacgctggagaatcaggtgatcgcctttgactgggcggag
atgcagaggtgggacaccgacgaagagggcatggccttctgctttgagtacgcccgggga
gagaagaaaccacgctgggtcaagatattcacaccttattttaactacatgcacgaatgc
ttcgagagagtcttctgtgagctgaagtggaggaaggagatagaagaagaggccacagac
aaggacaataagaactgcagcaaagatgaatattttccaactcctgaggcacagaaggga
tggaagcacctaggaagggaaatcgccacctcctaa
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