Takifugu flavidus (sansaifugu): 130532735
Help
Entry
130532735 CDS
T09160
Symbol
smg9
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130532735 (smg9)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
130532735 (smg9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
MeaB
MMR_HSR1
AAA_16
AAA_30
DUF6079_1st
URGCP_GTPase
AAA_18
Motif
Other DBs
NCBI-GeneID:
130532735
NCBI-ProteinID:
XP_056901535
LinkDB
All DBs
Position
10:complement(4077971..4082368)
Genome browser
AA seq
508 aa
AA seq
DB search
MSESGHSQPGMYGQGRRRRRRRGERDVGAPGQNLSGPSRDREFQPRERRDGSEDPPGPLI
QKTPIILAKPPGERAKPSQSGHGSATSVPEKPIMLMKARDDGPKPGTPPETAAQSSAPGP
SKLEKEGQRPTQPVYQIQNRGMGASASSSVVDPMVGQSKLLPPEKMKHSIKLVDDQMNWC
DSAMEYLRDQTDMLVVGVIGLQGAGKSTVMSLLSANTPEEDQRAYVFRAQTQEIKERGGN
QSTGIDFFITQERVIFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQIAAFL
FTVCHVVIVVQDWFTDLNLYRFLQTAEMCKPSTPSASHDSTGSSGSDDGAEYYPHIVFIQ
NKAGLDDFCPRNLKNMHMVVDKLMAHSHLKYKGTLSMLDCNIFPGLGQDYLTTEVNMFLL
PVQENDSDDGLTKAAPGTYPLFSLLPGYKGHPAFSTLVHKLRSRILAMPRCQLSHTILTE
KNWFHYAARIWDGVKKSSALSEYSRLLC
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatccggtcacagtcagcccggcatgtacgggcagggacgaaggaggagacgg
cggcggggagaaagagatgttggagctcctggacaaaatttgtctggacctagtagagat
cgagaattccaaccaagagagcgaagggatggaagtgaagatccaccaggtccgctcatt
cagaagacccctatcattcttgcaaaaccccccggagaaagggctaagccatcacagagt
ggccatggtagtgcaacatcagtaccagagaagcccatcatgctcatgaaggctagggat
gatggaccaaagccaggaacgcctccagagacagcagcacagtcttctgctccaggaccc
tccaagttagagaaggaagggcagcgacccacacagcctgtataccagatccagaacagg
ggaatgggtgcctctgcatcgagcagtgttgtagaccccatggtgggccagtctaaactt
ctcccaccagagaagatgaagcatagcattaagttagtggatgatcagatgaactggtgt
gacagtgccatggagtatcttagggatcagacagatatgttggtggtgggagtcattggc
ctccagggtgctggaaaatctacagttatgtcactgttatctgccaacactcctgaagaa
gatcagagggcttatgtgttcagagcccagactcaagaaatcaaggaaagaggaggaaac
cagagcacaggtatagatttcttcatcacccaggagagagtcatcttcttggatactcag
cctatactcagcccatctattcttgaccacctcatcaataatgatcggaaattgccccca
gagtacaacctgccacatacttatgttgaaatgcagtctcttcagattgctgctttcctg
tttaccgtttgtcatgtggttattgtggttcaagactggttcactgacttaaacctttac
aggtttcttcaaacggccgaaatgtgcaagccttccactccatctgcaagccacgacagc
actggctcttctggcagtgatgacggagcagaatattatccccatatagtgttcatccag
aataaggccggactggatgatttctgccccaggaatctgaagaacatgcatatggtggtg
gacaaattaatggcccactctcacctcaaatacaaagggacactgtcaatgctggactgc
aacatcttccctggtttagggcaggactatctcacaactgaagtcaatatgtttctcctt
cctgtgcaggagaatgattctgatgatggtctgactaaagcagcaccgggaacatacccg
ctcttctccctgcttccgggatacaaaggacacccagccttttccaccttggtccacaaa
ctgcgcagtcgaatcctggccatgccgcgctgtcagctgtcacacaccatcctcacagag
aagaactggttccactatgccgctcgtatctgggatggggtgaaaaagtcctcggccctg
tctgaatacagccgtctgctctgttag
DBGET
integrated database retrieval system
