Takifugu flavidus (sansaifugu): 130532904
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Entry
130532904 CDS
T09160
Symbol
vars1
Name
(RefSeq) LOW QUALITY PROTEIN: valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130532904 (vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tfs01007
]
130532904 (vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfs03016
]
130532904 (vars1)
Enzymes [BR:
tfs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
130532904 (vars1)
Amino acid related enzymes [BR:
tfs01007
]
Aminoacyl-tRNA synthetase
Class I (U)
130532904 (vars1)
Transfer RNA biogenesis [BR:
tfs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
130532904 (vars1)
Prokaryotic type
130532904 (vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
GST_C
tRNA-synt_1_2
Val_tRNA-synt_C
Arc1p_N_like
GST_C_2
tRNA-synt_1e
GST_C_3
Jag_N
Motif
Other DBs
NCBI-GeneID:
130532904
NCBI-ProteinID:
XP_056901826
LinkDB
All DBs
Position
10:complement(490354..499387)
Genome browser
AA seq
1270 aa
AA seq
DB search
MATLYVSPHLDDFRSLLALVAAEYCSSSRPRTLTKDPPASLNSSSRPXLLLGAREGDSVL
SGASAVSWYLALQGKKAGGNAKQQSQVWQWLSFADNELTPVSCAVVFPLMGMTGLDKKIQ
QNSRVELMRVLKVLDQALEPRTFLVGESITLADMAVAMAVLLPFKYVLEPSDRNVLMNVT
RWFTTCINQPEFLKVLGKISLCEKMVPVTAKTSTEEAAAVHPDAAALNGPPKTEAQLKKE
AKKREKLEKFQQKKEMEAKKKMQPVAEKKAKPEKRELGVITYDIPTPSGEKKDVVSPLPD
SYSPQYVEAAWYPWWEKQGFFKPEFGRKSIGEQNPRGIFMMCIPPPNVTGSLHLGHALTN
AIQDTLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLMREKGTSRHDLGREKFIEEVWK
WKNEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSYAVQEAFIRMHDEGVIYRSKRLVNWS
CSLNSAISDIEVDKKELSGRTLLPVPGYKEKVEFGVLVSFAYKVDGSDEEVVVATTRIET
MLGDTAVAVHPSDSRYQHLKGKTVLHPFCDRKMPVVFDDFVDMSFGTGAVKITPAHDHND
YEVGVRHNLAFINILDENGLLINVPPPFLGMKRFDARKAVLQALKDRDQFKEIKDNPMVV
PVCSRSKDIVEPLMKPQWYVSCSDMGKQAADAVREGRLKIIPDHHLKTWFNWMDNIRDWC
ISRQLWWGHRIPAYFITVSDASVKPGEDMDGHYWVSGRTPEEAREKAAKRFNVSPDKIAL
RQDEDVLDTWFSSGIFPFSIFGWPDETEDLNVFYPGTLLETGHDILFFWVARMVMMGLKL
TGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGIALEGLHAQLMDSNLDPLEVE
KAKQGQKADYPNGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKLWNAVKFA
MRTLGDQFVPADKAQLSGEESVSDRWILSRLSTAVAQCDAAFRTYDFPAITTAIYNFWLY
ELCDVYLESVKPVFIKAKEDGSCERPAAVCRQTLYTCLEVGLRLLAPLMPFVTEELYQRL
PRRRPQSDPPSICVTPYPDAAEFCWQCEDVDRDMDFIMAVVRTIRSLRSDYKLTKTAADC
YLQCTDAATVSLVQKYSLQIQTLSYSQAIVPLMAPQPAPEGCAVAIASDRCTVNMMLKGL
IDVEKEVAKLMGKKTDVEKQIEKLSEKISKGDYKEKVPVKVQEQDAEKLRQSQTELEKVK
EAMDNFQKMM
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggccactctatatgtgtcccctcacctggatgacttcaggagccttttggctcttgtt
gctgcagagtattgtagctcatctcgcccaaggaccctcaccaaggatcctcccgcctcc
ctgaattccagttccagaccancccttctgctcggagcaagagaaggagactctgtcttg
agtggggccagtgccgtgtcctggtacctggctttgcagggcaagaaggcaggtggaaat
gcaaaacagcagagtcaggtgtggcagtggctcagttttgcagacaacgaacttacccca
gtgtcctgtgctgtggtatttccactcatgggaatgactggattggacaagaagattcag
cagaactctagagtggaattgatgagagttctaaaggttcttgatcaggcactggaacca
agaaccttcctggtgggggagagcatcacactcgctgacatggccgttgctatggcagtt
ctcctgcctttcaaatatgttttggagccctcagacaggaacgtcttgatgaatgtaaca
cgatggttcacaacctgcatcaatcagccagaatttctgaaggttctggggaagatcagt
ctttgtgagaaaatggtgccagttacagcaaagacgagtacagaagaagctgctgccgtc
caccctgatgctgctgctcttaatggccctccaaagacagaagcccagctaaagaaagaa
gctaagaagagagaaaagctggaaaagtttcagcagaagaaggagatggaggccaagaag
aagatgcagccagtggcagagaaaaaggccaaacctgaaaagagagaattgggagtgatc
acatatgacatccccactccttctggggagaaaaaagatgtcgttagcccacttcccgac
tcctacagccctcagtatgtggaggctgcctggtatccatggtgggaaaagcagggattc
ttcaagcctgagtttgggcggaagagtattggcgagcagaacccccggggtatcttcatg
atgtgcatccctcctcctaacgtgaccggctcgcttcatctgggtcacgcgctcacaaat
gccatccaggacacgctgaccagatggcacaggatgcgaggcgagaccaccctgtggaac
cctggctgtgatcacgctggtatcgccacccaggtggtggtggagaagaagctgatgcgg
gagaagggtacgagccgccacgatctgggcagggaaaagttcatcgaggaagtctggaaa
tggaagaacgagaagggagaccgtatctaccaccagctgaagaagctgggctcgtcttta
gactgggacagggcctgcttcaccatggaccctaaactttcctatgcagtccaggaggct
tttatccgtatgcacgatgaaggagtgatctacaggagcaagagactggtgaactggtcc
tgctcactcaactctgccatctccgacatcgaggtggataagaaggagctcagtggaagg
acgctgctgccagtgcccggttacaaagagaaagtggagtttggcgttttggtgtctttt
gcctacaaggtggatggatcagatgaggaggtggttgtagcaaccactcgtatcgagacc
atgctgggagacaccgctgtagccgtccaccccagtgactccagatatcagcatctgaag
gggaaaacggtgctgcaccccttctgtgaccgcaagatgcccgtcgtcttcgacgacttt
gtggacatgagctttggaacaggtgctgtcaaaatcaccccagcccacgaccataatgac
tacgaggttggagtgagacacaatctggccttcatcaacatcttggatgaaaatggcttg
ctcattaacgtgcctccccccttcctgggtatgaagcgcttcgatgccaggaaggctgtg
ctgcaggccctcaaggaccgagaccagttcaaagaaatcaaagacaacccgatggttgtc
cccgtctgcagccgatccaaggacatagtggagccgctgatgaagccccagtggtatgtg
agctgctcagacatgggcaagcaggctgcagatgctgtcagagagggacgcctaaaaatc
atccctgatcaccacctcaaaacgtggttcaactggatggacaatatcagagactggtgc
atttcgcggcagctgtggtggggccaccgaattcccgcttatttcatcactgtcagcgac
gcctctgtgaagccgggagaggacatggatggtcattactgggtgagtggccgaacacca
gaggaagccagagagaaagcagcgaaacgcttcaacgtgtctccggacaaaatcgccctc
agacaagatgaagatgttctggacacgtggttctcgtctggcattttcccgttctccatc
tttgggtggcccgatgagacggaggacttgaatgttttctaccctggaaccttgttggaa
acgggccacgacatcctgttcttctgggttgctcgtatggtgatgatgggcctgaaactg
actggcaagctgccgttcaaagaggtgtacctgcatgcagtggtgagggatgcccacgga
aggaagatgagcaaatctctaggcaacgtcatcgatcctctggacgtcattacagggatc
gctctggaaggcctccatgcccagttgatggacagcaacttggatccactggaggtggag
aaggcaaagcagggccagaaggcagactatccaaatggcatcccagaatgtggcacagat
gctctccgctttgccctttgtgcctacacaagccaaggaagagatatcaacctggacgtc
aaccgcatcctgggctatcgccacttctgcaacaaactgtggaatgctgttaaatttgcc
atgaggacactgggagaccagtttgtgccagcagataaagcccagctgagcggagaggag
agcgtatcggaccggtggattctctctcggctcagcacagctgtggctcagtgtgacgct
gccttcagaacctacgacttcccagccatcacaacggccatttacaacttctggctgtac
gagctgtgtgacgtctacttggaaagtgtgaagcccgtgttcatcaaagcaaaagaagac
ggcagctgtgagagaccggccgccgtgtgtagacagacgctttacacgtgcttagaggtc
gggctgcgcctcctggctcccctgatgcccttcgtcaccgaggagctctaccagaggctc
ccacgacgacgaccccagagcgacccccccagcatctgcgtgacgccgtaccccgacgcc
gcggagttctgctggcagtgcgaggacgtggaccgtgacatggacttcataatggccgtg
gtcagaaccatcaggtcgctgaggtccgactataaattgaccaagactgcagcggactgt
taccttcagtgcacagacgctgccaccgtgtctctggtgcagaaatacagcctgcagatc
cagacgctgtcttactctcaagccatcgtccccctgatggccccccagcccgccccagaa
gggtgcgctgtggccatcgcctccgacagatgtacagttaacatgatgctcaaaggtctg
attgacgttgagaaagaagtggccaaactgatgggaaagaaaacggatgtggagaaacaa
atcgagaaactgagtgaaaagatttccaagggtgactacaaggagaaggtgccagtaaag
gtgcaggagcaggatgctgaaaagctacgacagagccagacggagctggagaaggtgaaa
gaagccatggacaacttccagaagatgatgtaa
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