Takifugu flavidus (sansaifugu): 130533030
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Entry
130533030 CDS
T09160
Symbol
emg1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130533030 (emg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tfs03009
]
130533030 (emg1)
Enzymes [BR:
tfs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
130533030 (emg1)
Ribosome biogenesis [BR:
tfs03009
]
Eukaryotic type
90S particles
Other 90S particles
130533030 (emg1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
130533030
NCBI-ProteinID:
XP_056902138
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All DBs
Position
10:872914..874755
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AA seq
237 aa
AA seq
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MADSSEKKRGLEHLDEYEPKPAKHLRSLHDRMAERRLVVILEGASLETVKVGKTFELLNC
DQHKNIIVKNGRNPGNIRPDITHQSLLMLMDSPLNRAGLLQVYVHTEKNALIEINPQTRI
PRTFTRFCGLMVQLLHKLSVRAADGPQKLLRMIKNPVSDHLPPGCPRIGTSFSSGEAVCP
RTLVPEGPAAVVIGAFAHGAVNVDYTEKTVSISNYPLSAALTCAKICSAFEEVWGVL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcaagcgagaagaagcgtggtcttgaacatttggatgaatatgaaccaaaa
ccagcgaaacatcttcgcagtctgcacgatcgcatggcagagagacgactggttgttatt
ctggagggagcatcgttagaaacagtaaaggtcgggaaaacttttgaactgttaaactgt
gaccagcacaaaaacataatcgtcaagaatggaaggaatccaggcaacattagaccagat
atcacccatcagtctctgctcatgttgatggacagtccactgaacagggcaggactgttg
caggtctatgttcacactgagaaaaatgccttaatagagatcaacccacagacccgcatc
ccaagaaccttcacccgcttctgtggtcttatggttcagctgctccataagctgagtgtc
agagctgctgatggtcctcagaagcttctgaggatgattaaaaacccagtgtctgaccac
cttcctccgggctgcccacgcattggcacctccttctcctcaggagaggctgtttgcccc
cgtactttagtgccagagggtcccgctgcagtggtgatcggagcgttcgcacatggggcg
gtgaacgtggactacacagagaagactgtgtccatcagtaattaccccctctctgcagca
ctgacctgtgcaaagatttgttctgcttttgaagaagtctggggggttttgtga
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