Takifugu flavidus (sansaifugu): 130533125
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Entry
130533125 CDS
T09160
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130533125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130533125
Enzymes [BR:
tfs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130533125
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130533125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4
RING_XB3-XBAT31
DUF5711
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
130533125
NCBI-ProteinID:
XP_056902272
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All DBs
Position
10:3203418..3206391
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AA seq
456 aa
AA seq
DB search
MIRPPVWISWTSIRLVEEHLDTLVMAQGPGLSCSSLGAEEILREIQVNLLECKVCFEKFS
TGQSGHRPQNLSCGHVLCLKCITSLSHPVLKRLECPFCRQPCSTDGTSHCRVLNDVQELV
FRRSASSSHGKNEDPRCGVGLASTALHLCTTLGGWGTLTNPTGIASLGSSGMMAVVHNGD
MKVVVFSPEGRKLYSFGERRQTSGDVCYPLDVAVSPCGHLVVTDAGDKAVKVFTSRGHHL
LTVAGSFQMPWGVATDSCGDILVTDTRTGVLSKVKVDYNRALLLENQTLVSDLQCPKAVA
CCWATGNAAVVEQVPDVAGPPGRHHHTRLRVFTTDFHLLYQTDSFSLSLQSSPRLHVSGV
AFDGDGDVIITDSSQGMVWSLGNLRHGPVLTPLVGEHLIHPVGLVSVNNSLVVLDAGDHT
VKIYSAGRKAGSITKPIPFEQAQNISSHLGPQHTTN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgatcagaccgcctgtttggatctcctggacttctatcagactggttgaagaacatttg
gacacattagtcatggcccagggtcctggtctctcctgttccagcctcggtgctgaagag
atcctgagagaaatccaggtcaatttactggaatgtaaagtctgctttgagaagttcagc
actgggcagagtggccataggcctcagaacctctcctgtggtcacgtcctctgcctgaaa
tgcatcacctctctttcccaccccgtcctgaagaggctggagtgccccttctgtcgtcag
ccatgcagcactgacggcacctcccactgccgggtcctcaacgacgtgcaggaactggtc
ttccggcgttccgcgtcatcttctcacgggaaaaacgaagacccccgctgtggtgtgggc
ctggcatccacagctctgcacctctgcacaactttggggggttgggggactctcaccaac
cccactgggatagcctctttgggttcctctggcatgatggctgtggtgcacaacggtgac
atgaaggtggtggtgttcagtccagagggccgaaagctgtacagttttggggaaagaaga
caaaccagcggggatgtctgctacccactggatgtggcggtgtctccttgtggtcacttg
gtggtgaccgatgcaggcgacaaagctgtgaaggtgtttacctccagggggcaccacctt
ttgacggttgcaggttccttccagatgccctggggtgtggccacagacagctgtggagac
atattagtgacagatactcgcaccggtgtgctatccaaggtaaaagtggactataaccgc
gctctcctcctggagaatcagactctggtttcagacctccagtgtccaaaagcggtggct
tgttgctgggccacggggaacgccgccgtggtggagcaggtccctgatgtcgctggccca
ccagggaggcaccatcacacccgactgagggtgtttacaacagactttcacctgctttat
cagactgacagcttcagcctgagcctgcagtcctcccccaggctgcacgtgtccggcgtg
gccttcgacggagacggagacgtgatcatcaccgactccagccaggggatggtctggagt
ttggggaacctccgtcatggtccggttctgactcctctggtgggagaacacctcattcat
ccggtgggtctggtgtcagtgaacaacagcctggtggttctggacgctggagaccacaca
gtaaagatctattctgctggacgtaaagccgggtccatcacaaagcccattccatttgag
caggcccaaaacatctcatctcatctgggacctcagcatactaccaattga
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