Takifugu flavidus (sansaifugu): 130533135
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Entry
130533135 CDS
T09160
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tfs00535
]
130533135 (col14a1a)
Proteoglycans [BR:
tfs00535
]
Extracellular matrix (ECM) proteoglycans
Others
130533135 (col14a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
VWA_3
DUF4959
Mid1
VWA_CoxE
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
130533135
NCBI-ProteinID:
XP_056902284
LinkDB
All DBs
Position
10:4703678..4775523
Genome browser
AA seq
1804 aa
AA seq
DB search
MLSTGKIRWCLWAPLVLLALVSGVPSKAQDMVPAPRRLRFKVLSSSKLLISWKEPKGDFD
SYLFLYNSVPGTDRGQRRAQTALGNIFVKHFKGGQQREIIVSKSDTKVLITDFNPSKDYI
VSVSAVSGTVQSRPLQGRYKAEGGENAGGGKTEPQRQAESVAPPEDANEIVGVDQFVCRT
EAIADIVILVDGSWSIGRLNFRLVRMFLENLVDAFDVGIDKTRIGLAQYSGDPRIEWHLN
AYSTKDAVIDAVRNLPYKGGNTLTGLALNFILENCFKPESGSREGLPKIGILITDGKSQD
DVIPPAESLRNAGIELFAIGVKNADENELQSIASPPEDTHVYNVADFNVMNSIVEGLTRT
VCEQVVQQDKEIKQMSEHTAETVGAPLELVTSEVTAQNFRVSWSPAPGKVEKYRVVYYAA
RGGEPHEAVVDGSETSVVLGHLSSLTEYQLAVFAVYANEASEALRGSETTLALPSVTGLQ
LLDVTHTTMKATWDSVEGASGYMLLYGPLIEDGQLNEKEIKLPDAVTQLELQGLNPQTEY
TVTVYAMYGDEASDPMTSQETTLPLNPPSNLQFSDITHKSAHISWDPAFPAVKGYRIMWV
KTDGLVMEEVMVGNVNSYDLSNLMSLTEYSVAISALYSEGQSEPLTDGFTTTPVPGPLNL
RSTDVSTDSFLVIWDHSANDIVLYRLSWAPSTGGDTKEVVLSGSNNRYVLTGLNPSTEYE
VLLTAVFKDESESDTISVTETTLAKTTTIATTTTVVRQAVRNLQLSDETIESLEASWEMN
DPYVENYRISYFGDNHKEETLLVPGGQRRAVLRSLLSDTQYKVTVTPVYTDGQDGISTSA
LGATLPLLSPGNLRISEEWYNRFKVTWDPPQSPTVGYRIVYQPVYVPEPMLETTVGEDVN
SVVLVNLLPGAEYNVQLTASYPTGDSEPLLVKAKTLFLGVSGLSTYQVRPDSMCVQWQPI
RQASLYRVSIHSPLNGQKQEVTLGSGASRQCFYDLTPSSQYQISVRTGMQDTEGPSVSIT
DMTLPAPTQAPTEPPTTEPPPTIPPPKEVCKEAKADLVFLVDGSWSIGDENFMKITRFLH
STVGSLDLIGSDGTQVAIAQFSDDARTEFQLSSHSNKEALLEAIQKISYKGGNTKTGRAI
KHVKESIFSSEAGARRGVPKVLVVLTDGRSQDDVNKVSKEMQMDGYIIFAIGFADADYGE
LVNIASKPSDRHVFFVDDLDAVKKIEEQLITFVCEAATATCPSVLMSGNTIAGFRMMGKF
GLVEKEYSTIPGVSLEPGSFNSFPSYRLHRDALVSQPTKYLHPEGLPSDYTISMMLRLLP
ETPQEPFALWEILNQSNEPLVGLILDNSGKTLTFFNHNFKGEFQTVTFEGNEIKKLFHGS
FHKLHVTVSKTSVKVVLDCSAVGEKSVNAAGNITTDGVEILGRMVRSRGRRDSSAPFQLQ
MFDIICSTSWASRDKCCELPALRVEEQCPPLPHACTCSQDSKGPPGPSGPPGGPGTRGAR
GDRGDPGLTGPQGPVGDAGLPGPPGPPGPQGPSGLSIQGPPGVAGEKGERGAIGPPGQMG
LPGGPGSPGRDGPPGVRGLTGNAGPQGRQGPPGPVGAPGAPGAPGPGGSAGSPGEQGLPG
PAGTKGDKGERGDVQSQAAVRAIARQVCEQLIQSHLSRYNSILNQIPVQSSTSVRTVPGP
PGEPGRRGPPGPPGEQGPTGRPGFPGTNGQSGRPGDRGLPGEKGERGTPGVGSQGPRGPH
GPPGPPGEGRAGSQGPPGRPGNPGTPGRPGNQGAPGQTGPPGYCDQNSCLGYNVGVQQDY
GNDY
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctacagggaagattaggtggtgtttgtgggctccgctggtattactggcctta
gtttctggtgtccccagtaaagcacaggatatggttccagctccaagaagactgcgtttc
aaagtgctgagctcaagcaaactccttatttcctggaaagagcccaaaggagactttgac
agctatctgttcctctacaacagtgtaccaggtaccgacagggggcagcgacgagcccaa
accgcactcggaaacatattcgtgaaacacttcaaaggtgggcagcagagggagatcata
gtatctaaatctgacacgaaggtgttgataacagacttcaacccctctaaggattatatt
gtcagtgtgagcgctgtcagcggcactgtgcagagcagacccctccaggggaggtataaa
gctgaaggaggtgagaatgcaggtggaggcaagactgagccccaaaggcaggcagaatca
gttgcacctcctgaggatgccaacgagatcgttggagttgatcagtttgtgtgccgcact
gaggccattgcagacattgtgatcttggtggacggatcctggagcatcggccggctcaac
ttccgtttggtccgcatgttcctggaaaaccttgtagatgccttcgatgtcggcattgat
aaaacaaggataggtctagcccagtacagtggtgatcccaggattgagtggcatctaaat
gcctattccactaaagatgctgtcattgatgctgtcaggaacctgccttacaaaggtgga
aacactctcacaggactcgctttaaactttatcttggagaactgctttaagcctgaatct
ggctcacgggaggggttgcccaagatcgggatcctcatcaccgatgggaagtctcaggat
gatgtcataccccccgctgaaagcctgcgaaatgctggcattgagctgtttgctattggt
gtaaagaatgctgatgaaaatgaattgcagtcaattgcctcaccgcccgaagatactcac
gtgtataatgtggctgatttcaatgtcatgaattcaatagtggagggactgaccagaaca
gtgtgtgaacaagtggtgcagcaagacaaggagataaagcagatgtcagaacacacagca
gaaactgtcggggcgccacttgaactggtgacctcagaagtgacggcgcaaaactttcgg
gtttcgtggagccccgcccctggaaaagtggaaaaatacagagtggtttattacgctgct
cgaggaggagaaccacatgaggcggttgtggatggtagtgagacgtcggtggtgttaggc
catctcagttcgctgacggagtaccagctggctgtgtttgctgtctatgcaaacgaggcg
agcgaagctctgagaggatcagaaacaacattggctcttccctctgtgacgggtctccag
ttgcttgatgtgactcacactaccatgaaagcaacatgggacagtgttgaaggagcctct
ggatacatgttgctgtatggaccacttatagaagatggacaactgaatgaaaaggagatc
aagttacctgatgctgtgacgcagctggaacttcaaggtttgaaccctcaaaccgaatac
actgtcactgtttatgccatgtatggagatgaagccagcgaccccatgaccagccaggaa
actacattgccgctgaatcctcccagcaacctccagttctcagacatcactcacaaatct
gcccacattagctgggaccctgcattcccagcggtcaaagggtaccgcatcatgtgggtc
aagacagacgggctagtcatggaagaggtgatggttggaaatgtgaactcctatgacctc
agcaatttgatgtctttgacggagtactcagtggccatctctgctctgtacagcgaaggg
cagtcggagcctctcacagacggattcacgaccactcccgttcctggccctttgaacctg
cgctccactgatgtaagcaccgacagcttcctggtcatttgggaccactcagccaatgac
atcgtcctctacagactctcatgggcaccatccacaggtggtgacacaaaggaggtcgtc
ttaagtggaagtaataacagatatgtcctgactggtctgaatccatcgacggagtatgaa
gtcctgttgacggctgtcttcaaagatgaatctgagagtgacaccatctctgtcactgag
acaacattggccaagacaacaacgattgctaccacaaccacagtggtgcgtcaagctgtg
agaaaccttcagctgagtgatgagaccatcgagagcttagaggcatcatgggagatgaac
gacccctacgtggagaactacaggatttcttactttggtgacaaccacaaagaggagact
ttgttagttccaggtggtcagagaagggcagtgcttcggtcattactgtcagacactcag
tataaagtgacggtcactccggtatacacagatggacaggacggcatcagcacctcagca
ctcggcgccacgttgccgcttttgtctcctggaaatctccgtatatcagaagagtggtac
aaccgcttcaaggttacatgggatccacctcagtcacctacagttggttacaggattgtt
taccagcccgtctacgttccagagccaatgttggagacaacagtgggtgaagatgtgaac
tctgtagtccttgtgaacctgctacctggggccgagtacaatgttcagttgacagcgtcc
taccctacgggagatagtgaaccgctgctggtgaaagccaagacattgtttctcggtgtc
tctggtttatcaacataccaggtacgacctgacagcatgtgtgtgcagtggcaacctatt
cgacaggcctcgttgtacagagtctccatacattctccactcaatggtcaaaagcaggaa
gtgaccctgggaagtggtgcctccaggcaatgcttttatgacctcacgcccagcagccaa
taccagatcagtgttcgcacggggatgcaagacacagagggaccttctgtttccatcact
gacatgacattgccagcccccactcaagctcctactgaaccacccaccacagagccccca
cccaccatccccccacctaaggaagtgtgtaaagaggccaaagctgacctggtgttcctt
gtcgatggatcctggtctattggagatgaaaacttcatgaagatcacgcgttttctccac
agcaccgtgggctcgcttgacctgattggatcagatggaacccaggtggccatcgcacaa
ttcagcgacgatgctcggacagaattccagttgagttcccatagcaacaaggaggctctg
ctggaagcaattcagaagatcagctacaaaggaggaaacacgaaaacaggtcgagccatc
aaacacgtaaaggagtctatattctcctcagaggctggagcgagaagaggcgttcccaaa
gtcctggttgttctcacggatggacgttcacaagacgatgtaaacaaagtgtccaaggag
atgcagatggatggctacatcatatttgccattggctttgcggatgcagactacggagag
cttgtgaatattgccagcaaacccagtgatcggcatgtcttctttgtggatgatctggac
gctgtgaagaaaatagaggagcagctcattacctttgtctgcgaggctgcgactgccact
tgtccgtctgttttgatgagtggaaacacaatagcaggttttcggatgatgggcaaattt
ggtcttgttgagaaggagtacagcaccatccctggagtttcgctggagccgggatctttc
aacagcttcccatcttacagattacatcgtgacgcactagtgtcacagcctacaaagtac
ctgcatcctgaaggtttaccatcggactacaccatttctatgatgctccgcctgcttcct
gagaccccgcaggaaccttttgctctgtgggaaatcctcaaccagagtaatgagccattg
gtgggactgatcttggacaactctggaaaaacgctaacgttcttcaaccataattttaaa
ggagagttccagactgtcacatttgaagggaatgaaatcaaaaaactcttccatggcagc
ttccacaagctccacgtgaccgtcagcaagacatctgtgaaggttgtgttggattgttct
gcggttggggagaaatcagtgaatgctgctggaaacattaccacagatggagtggagatc
ttgggaaggatggttcggtccagagggaggagggacagctccgcaccattccagctccag
atgtttgacatcatctgcagtacttcctgggccagcagagataaatgctgtgaactgcca
gcattgagagttgaagagcagtgccctcccttgcctcatgcatgtacctgctcccaggac
agcaaaggccctccaggaccctctggacctccaggaggcccaggaacgaggggagccaga
ggagacagaggagacccaggattgacgggacctcaagggccagtaggagacgccggtctt
ccaggaccgccaggaccaccgggtccccagggacccagtggtctgtctattcaggggccc
cctggtgttgctggagagaaaggagagaggggggcaattggtccacctggacaaatgggt
ctccctggaggtccaggttcccctgggagggatggccccccaggtgttaggggtctgaca
ggtaacgctggtcctcagggacgacaaggaccgccaggaccagttggagcaccaggagca
ccaggagctccggggcctggtgggtcagcagggtccccaggagaacaagggcttccaggt
cctgctggcaccaaaggagataagggagaaagaggtgatgtacagtcccaggctgcagtg
cgcgccatcgcacggcaggtgtgtgaacagcttatccagagccacttgtctcgctacaac
tccatattgaaccagatccccgtccagtcctccacgtcagtccgtacagtgccaggaccg
cccggtgagccaggtcggagaggtccccctggacctccgggtgagcagggccccactggt
aggcccggttttcctggcaccaatgggcagagcggacgaccaggagacagaggtttacca
ggagaaaagggggagcgagggaccccgggcgtcgggagtcagggacctcgagggccacac
ggacctccaggtccacccggtgaaggtcgggcaggcagccagggccctcctggtcgtcct
ggtaaccctggaacaccagggagaccaggtaatcaaggtgcaccgggacaaaccggacca
ccaggatactgtgatcagaattcctgcctgggatacaatgttggagttcagcaggattat
gggaatgattactga
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