Takifugu flavidus (sansaifugu): 130533137
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Entry
130533137 CDS
T09160
Symbol
limd1a
Name
(RefSeq) LIM domain-containing protein 1
KO
K16682
LIM domain-containing protein
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130533137 (limd1a)
03036 Chromosome and associated proteins [BR:
tfs03036
]
130533137 (limd1a)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130533137 (limd1a)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
130533137 (limd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
130533137
NCBI-ProteinID:
XP_056902292
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All DBs
Position
10:4676946..4689955
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AA seq
603 aa
AA seq
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MDKYEDLGLEASKFIEDLNMYEASRDGLFRTRRDVGNNPDFEETRKVFASKMTKIHMQKH
QEEMARNSPAMKMNGGHASGYHTKDRPPINSNRQAGEAAAKPPMLSGPAPGTAAANQCAP
FDGQKHHTGAQPELPTGRAYGYGNNYDNKESLEPHAYQRATHTPPSPGNASPSAPTHARH
PISQSAVWAPSTESQISTAGSGSSAASQLPRQPTPPSSISVPPQHFQTGTSSGNWTSPSS
SRGLLRESKPDLIPSLPLSAFIGGDDLHMQQPTTQASAYYDPQSPRPSSSRNGSAPVSPV
PPSPHETPQLKAQEASSASAPGSIARSGSQIQSKSPVPGNVRGFEADVPCSPKSAQLVSQ
SLLTQPQEQGSSAAEMKLEAITKRLEKEMDAQAKGDFFGTCVKCNKEVYGANQACQAMGN
LYHDNCFTCSACSRRLRGKAFYYVGGKVFCEEDFLYSGFQQSADKCNACGHLIMDMILQA
LGKSYHPGCFRCVICNESLDGVPFTVDTENKIYCLKDYHRVLAPKCSACNQPILPSEGSD
ETIRVVSMDKDYHVECYRCEECKIELNDEEGHRCYPLNGHLLCHSCHLKNIQGCAPSITA
SSY
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgaggacctgggactggaggcgagcaagtttatcgaggacttgaacatg
tacgaagcatcgagagatggtttgtttcgcacgagaagagatgtaggaaacaacccagat
tttgaagagaccaggaaagtttttgcctccaaaatgactaaaatccacatgcagaaacac
caagaggaaatggcaagaaacagcccggcgatgaaaatgaatggtggccacgccagtggg
tatcacaccaaggacagaccgcctattaatagcaacagacaagcgggtgaagcggcggcg
aagcccccgatgctctctggccctgcgccgggcaccgcggccgcgaatcagtgcgctccg
tttgacggccagaaacaccacacgggcgcgcagcctgaactcccaaccggaagggcatat
ggctacggaaacaattatgataataaggagagtttagagccacatgcataccagcgcgcc
acccatactccccccagcccaggaaacgcgtctcccagcgcgcccacacatgctcgtcac
cccatcagccagtctgcggtttgggccccgtccactgagagccagatttccactgctggc
tctgggagcagtgctgcatctcagctgccccgccagccgacaccacccagtagcatcagc
gtcccgccccagcactttcagacaggcacctcatcgggaaactggacttcaccttcttct
tccaggggattgttaagggagtccaaaccagacctcatcccatccttgcctttaagtgcc
ttcatcggaggagatgacttgcacatgcagcagcccaccacgcaggcctcagcctattac
gacccacaatccccaagaccctcctcctcccgtaatggttccgcaccagtttccccagtt
ccaccttctccccacgaaacgcctcaactcaaagcacaggaggcttcttcggcatcagca
cccggcagcattgccaggagcggcagccagattcagtccaagagcccagtgcctggcaat
gtccgtggctttgaggcagatgtcccgtgctccccaaagtctgcccagctggtttctcag
tctctcctcactcagccgcaagagcagggatcttcagcggctgaaatgaaattagaggcc
atcactaagcggctggaaaaagagatggatgctcaagcgaagggtgacttctttggaacc
tgcgttaagtgcaacaaggaggtctacggagccaaccaggcctgccaggcaatggggaac
ctttaccatgacaactgcttcacctgcagcgcctgcagtcgacggctgagaggaaaggca
ttttactacgtgggtgggaaggttttctgcgaagaggactttctgtactctggtttccag
cagtctgcagacaagtgcaatgcctgtggacacctgatcatggacatgatcctacaagcc
ctggggaagtcctaccacccaggctgtttccgctgtgtcatctgtaacgagagccttgat
ggagtgcccttcaccgtggacacggaaaataagatctactgcctcaaagattaccacagg
gtcctcgcaccaaaatgctcagcctgcaaccagcccatcctgccgtcagagggctcggat
gagacaatccgagttgtgtccatggataaagactatcacgtggaatgctaccgctgcgag
gaatgcaagatagagctgaatgacgaggagggccaccgctgctaccctctgaacggccac
cttctctgccactcctgccacctcaagaacatccagggctgcgccccctccatcaccgcc
tcctcctattaa
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