Takifugu flavidus (sansaifugu): 130533170
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Entry
130533170 CDS
T09160
Symbol
dhx16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130533170 (dhx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfs03041
]
130533170 (dhx16)
Enzymes [BR:
tfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130533170 (dhx16)
Spliceosome [BR:
tfs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
130533170 (dhx16)
Complex C
U4/U6.U5 tri-SnRNP related factors
130533170 (dhx16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
nSTAND3
AAA_19
Flavi_DEAD
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
130533170
NCBI-ProteinID:
XP_056902363
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All DBs
Position
10:complement(13260676..13269989)
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AA seq
1051 aa
AA seq
DB search
MAGLEQWVNDRLHDILGLSHKYVSQFMICTAQKASSSEDLVARLEQTGTIDIDQSVIAFA
QELFDKVPRKQVIEKPSRAVEREAIEMDRKNRLYTLLESDSDEDAVRDKQKERKRDKDRE
KKRKHIRQKKESESSSDDEAPKRKLSEQNIKGDSTKEEDEEEEWEKEERERQQDIEERDA
FAERVKQKDKDKTRHIAERTDKKAYEEAQKRLKMAEDDQRKIVPELRKYSRREYLKKREA
EKLEDLEAEIKDEEYLFSTEELTERERKELLYKRTLRDLAKDYKKAGAKEEEERKNRYYM
PEENRRKEVPQKDLELEEMPMEQGGEQGRWEEERLKTASLTFGAKKERELGMRREQERYQ
LLLEDDEMIDFVSTAITMKGTLTEKDEDTPALSQAELKKQSMQEVRRSLPIFPYREDLLS
AIEEHQILVIEGETGSGKTTQIPQYLFEEGYTRDDKKIGCTQPRRVAAMSVAARVAQEMS
VKLGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTD
ILFGLIKDIARFRADLKVLVASATLDTERFSRFFDDAPVFRIPGRRFPVDIFYTKAPEAD
YLEACVVSVLQIHVTQPTGDVLVFLTGQEEIEACCEMLQDRCRRLGSKIAELVILPIYAN
LPSDMQAKIFTPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNARTGMESLI
VTPCSKASANQRAGRAGRVAAGKCFRLYTAWAFKHEMEETTVPEIQRTNLGNVVLLLKSL
GINDLVHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKMILA
SEQYKCSNEVLTIAAMLSVNNSIFYRPKDKVVHADNARMNFVVPGGDHLVLLNVYNQWVE
SGYSTQWCYENFIQFRSMRRARDVRDQLEGLMDRIEVEVVSSQEDNVPIRKAVTAGYFYH
TARLSKGGYKTVKHQQTVFVHPNSSLFEELPRWIIYHELVFTTKEFMRQVIEIESSWLLE
VAPHYYKSKELEDNSNKKMPRKQGKTKEELG
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggctggtctggaacagtgggtcaatgaccgtcttcatgacatccttgggctgagccac
aaatatgtgtctcagttcatgatttgcacagcacagaaagcatccagctctgaagacttg
gtggctcggcttgagcagacggggactattgacattgaccagagtgtgatcgcctttgca
caagagctttttgacaaggttccccgcaagcaggttattgagaaaccatcccgggcagtg
gagcgcgaagccattgaaatggaccgaaaaaatcggttgtatacgttacttgagagtgac
agtgatgaagatgctgtgagggacaagcagaaagaaaggaagagagacaaagacagagaa
aaaaagagaaagcacatcagacagaagaaagaaagcgagtcgtcaagtgatgacgaagct
cccaaaaggaaactttcagaacagaatatcaaaggggattctacgaaagaagaggatgaa
gaggaagagtgggaaaaggaagaaagggagcgacagcaggacattgaggaaagagatgct
tttgccgaaagagtgaagcagaaagacaaagacaagactcgccacatagcagagagaact
gacaaaaaggcttatgaggaagcccagaagaggttaaaaatggctgaagatgatcagagg
aaaatagtaccagagttgaggaaatactctcgcagagaatatctcaagaagagagaagca
gagaagctggaggacctggaagcagagatcaaggatgaagagtacctgttttctacagaa
gaactgactgagagggagagaaaggagttgctttacaaacgcacccttagagacctggca
aaagattataaaaaggctggtgccaaggaagaagaagagaggaagaacagatattatatg
ccagaagaaaataggaggaaggaggttccccagaaagatctggagctagaggaaatgccc
atggaacagggaggagagcaaggccgttgggaggaggagaggttaaagacggcttctctt
accttcggtgctaagaaggaacgagagctaggcatgaggcgtgagcaggagaggtaccag
cttctcctcgaagatgatgagatgattgattttgtcagcactgccattaccatgaaggga
acactgacggaaaaggatgaggataccccggctctttcccaggcagagctgaagaaacag
tccatgcaggaggtgcgacgaagccttcccatcttcccctacagagaggacctgctgtcg
gccattgaggagcaccagatccttgttattgagggagaaacgggctctggaaagaccacc
caaatcccacagtatctctttgaagagggctacacgagggatgataaaaagattggctgt
acgcagcctcgccgagtggctgccatgtccgtggcagccagagtggcgcaagaaatgagc
gtcaagcttgggaatgaggttggctacagtattcgttttgaggactgcacttcagaaaga
acggtgctcaagtacatgacagacggcatgctgctcagagagttcctcaccgagcccgat
ctggccagctacagtgtgatcatcatcgatgaggcccacgagcgaacgctccacacggac
atcctctttgggctaattaaagacatcgccaggttcagagcagacctgaaggtgctggtg
gccagtgccactctggacaccgaacgcttctcccggttcttcgacgacgctcccgtcttt
aggatcccgggcaggaggttccctgtcgacatcttctacacaaaagctccagaagcagat
tacctggaggcctgtgtggtgtctgtgctacagatccacgtcacccagcctactggagac
gtcctggtgtttctgaccggacaggaagaaatcgaagcatgttgcgagatgctccaagat
agatgcaggaggctgggatcaaagatagcagaactggtcatccttcccatctatgccaat
ctgccgtctgacatgcaggcaaagatcttcaccccaaccccgcccggagctcgcaaagta
gtggtggctaccaatatagcagaaacctcactaaccatagatggcatcatttacgtcatc
gatccaggcttctgcaaacagaagagctataatgcccggactggcatggagtcactcatt
gtcacaccctgctccaaggcttcagccaaccagcgggcaggccgtgcaggccgagtggct
gctggcaagtgtttccggctgtacacggcctgggctttcaaacatgagatggaggaaacg
actgtgcccgagattcagaggaccaacctgggaaacgtcgtcctcttgctgaagagttta
ggcattaatgaccttgttcactttgacttcatggacccaccacctcacgagaccctggtg
ttggcattggagcagctgtatgctttaggagccctgaaccaccttggagagctcactaag
cttggtcgcaggatggccgagcttccagtggaccccatgctgagcaagatgatcctggcc
tccgagcagtacaagtgctccaacgaagtgctgacaatagcagccatgttgtctgtaaac
aactccattttctaccgacccaaagacaaagttgtgcatgccgacaacgcgcggatgaac
ttcgtggtgcctggaggagaccaccttgtgctgctgaatgtctataatcagtgggtagag
agcggatattcaacgcagtggtgctatgagaacttcatccagtttcgctccatgaggagg
gcccgggatgtcagggaccagctggagggcctcatggaccgtatcgaggtggaggtggtc
agttcccaggaagacaatgtgcccattcgcaaggctgtaacagctggttatttctatcac
accgcgcgcctcagtaagggcggctacaagacagtgaagcaccagcagacggtcttcgtc
cacccaaacagttcccttttcgaagagctgcctcgctggatcatctaccacgagctagtg
ttcaccactaaagagttcatgcgacaggtgattgagatagagagcagttggttgctggaa
gtggctcctcactactacaagagtaaagagctggaggacaacagcaacaagaagatgccc
cgcaaacagggcaaaacaaaggaagagctgggctga
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