Takifugu flavidus (sansaifugu): 130533221
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Entry
130533221 CDS
T09160
Symbol
sec24c
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec24C
KO
K14007
protein transport protein SEC24
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130533221 (sec24c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130533221 (sec24c)
Membrane trafficking [BR:
tfs04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
130533221 (sec24c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
130533221
NCBI-ProteinID:
XP_056902467
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All DBs
Position
1:complement(28227395..28237554)
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AA seq
1216 aa
AA seq
DB search
MNVDQHAPMASQYGPPPPGYGQPSYPPLDGGYPAPYAPYNGPASAYQPGPPSKGYSAFTS
FPSKAVAPPASDLSSPLDLGPSRGPPTSGAPPAPAAQPLNQYSHSPANVQNGPPPMTQPP
PRPQQYSQGAVTLAGATYPHHYGPPSMQQVTNHMTGMQITSGAPAAAGPDYAPPHRSEAP
ASTAYSAAPPPSSSAPLPPPSPSAPSQQYYRGPPCPPQHPFAAAAPPTSQQQFTPPASQQ
TFPPPSHSSVPPPSQAPAPQPPFSAPPPVSQAAFLSGPPPPAQGSFPPRAPPPSSQPGSF
PPSGPPPTSLSSGHYGQMPPQQPPPSQPSPYHSGPPPPSGHMPPTSMAQSNHLPPGPQGX
AGLSGPLQGAPGGFPPQQNGAFGPVRAPQPGYAGPYPGQPPYGGPAPAPGPAPAPAPPAQ
KRLDPDAIPSPPASDVPAVQRSRHRIDPDAIPSPIQVIEDDKVKTTEPFTTGVRGQAPPL
VTTHFQVKDQGNASPRFVRCTAYNMPCTADMAKQSQVPLAAVIKPLGTLPPDESPPYLVD
HGEGGPIRCNRCKAYMCPYMQFMEGGRRFQCGFCSCVTEVPPHYFQHLDHTGKRVDYYER
PELSLGSYEFLATVDYCKNNKLPQPPAFIFLIDVSYNAVKSGMVAIVCQELKTLLDHLPR
ENPEADSPVRVGFVTYNKVLHFYNVKSSLAQPQMLVVSDVSDTFVPLLDGFLVNVKESRL
VIESLLDQIPEMFAETRETETVFGPVVQAGLEALKAADCAGKLFVFHTSLPIAEAPGKLK
NREDKKLIGTDKEKALFQPQISFYNSLAKDCVAQGCCVDLFLFPNQYVDMATLGVVPVST
GGSVYKYTYFQAETDKEQFLNDLRRDVQKLIGFDAVMRVRTSTGIRATDFYGSFFMSNTT
DVELAGLDCDKAVTVEFKHDDKLSEETGALMQCAVLYTSCSGQRRLRIHNMAVSCCSQLA
DLYRNCETDTIINYFAKYAFRGVLSNPTKAVRDTLVNQCAQILACYRKNCASPSSAGQLI
LPECMKLLPVYLNCVLKSDVLLPGADVSLDDRAYLRQLVSGMDVSESHVFFYPRLLPAIK
LENGSLPVAIRDSEERLSKGGVYLLETGLRLFLWVGASVQQEVLLSIFGTSSFSQIDSSL
TSLPVLENPYSQRLRELIHSFRAQRSRYMKLTVVKQEDRSELIFKRFLVEDKSASGGASY
VDFLCHMHKEIRQLLS
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagaccagcacgctccgatggcctcccagtacggtccgcccccccctggctac
ggccagcccagctacccccctctggatgggggctaccccgcgccgtacgcgccctacaac
ggccccgcctcagcctaccagccgggcccccccagcaaaggttattccgctttcaccagc
tttccctctaaggctgtggcccccccggcctctgacctgtcctccccccttgacctgggt
ccatccaggggcccccccacctccggggctcccccagctccagcagctcaaccgttgaac
cagtacagccacagtccagccaacgtgcagaatggacccccccccatgacacagcccccc
cccagaccgcagcagtacagccagggagccgtgactctggcgggggccacctacccccac
cactatggtcctcccagcatgcaacaggtcaccaatcacatgacagggatgcagatcaca
tctggagcgccagctgctgcagggccggattacgcgcccccccaccgctccgaagctcct
gccagtacagcctactcagctgcgcccccccccagctcctctgccccgctgccccccccc
agtcccagtgctccttctcagcaatattaccggggcccgccatgtcccccccagcatccc
ttcgccgctgctgcccccccgacttcacagcagcagttcacccccccggcctcgcagcag
accttcccccccccttctcactcctccgtgcctccgcccagccaggcccccgccccgcag
ccccccttctccgcacctccacctgtcagccaagctgcgttcctgtctggccccccccct
ccggctcagggctcttttccaccgagagcgccccctccatcctctcagcctggatccttt
cccccctctgggcccccccctacttcgctgtcctctggccattacggccaaatgcccccc
cagcagccccctccctcccagccatcgccgtaccactcggggcccccccctcccagtggt
cacatgccgcctacgtccatggctcagagcaaccacctgcccccgggcccacaggggngc
gccggcctgtctgggcccctgcagggggcgccgggggggttccccccccagcagaacgga
gcgtttgggcccgtcagggccccccagccgggatacgctggcccctatcccggacagccc
ccctacgggggcccggctccagctccaggaccagcaccagctccggccccccctgcacag
aagaggctggacccagacgccatccccagcccgccggcgtcagatgttccggccgtgcag
aggtccagacatagaatagatcccgacgctattcccagcccaattcaggtcatcgaggac
gacaaggtcaagaccactgaaccgttcaccacgggggtcagaggtcaggcccctccgctg
gtcaccactcatttccaagtgaaagaccaaggtaacgccagcccccgcttcgtccgctgc
accgcctacaacatgccctgcacggccgacatggccaagcagtcccaggtgcccctggcc
gccgtcatcaagcccctgggcacgctgccgccagacgagagccccccgtacctggtggac
cacggcgagggggggccgatccgctgcaaccgctgcaaggcctacatgtgtccgtacatg
cagttcatggagggggggcgccgcttccagtgtggcttctgcagctgcgtcacagaggtg
cctccacattacttccagcatctggaccacaccgggaagagggtggactactacgagagg
ccagaactgtcgctgggcagctacgagttcctggccactgtggactactgtaagaacaac
aagcttcctcagcctccggccttcatcttcctcatcgatgtgtcctacaacgctgtgaag
agcgggatggtcgccatcgtgtgccaggagctcaagaccctcctggaccacctgcccagg
gagaaccccgaagcggactcgccggtccgggtgggcttcgtcacctacaacaaggttctg
cacttctacaacgtcaagtcgagcctggcgcagccgcagatgctggtggtctcggacgtg
tccgacaccttcgtcccgctcctggacggcttcctggtgaacgtcaaagagagccgcctg
gtcatcgagagcttgctggatcagatacctgagatgtttgcagagaccagggagacggag
acggtctttgggcccgtggtccaggccggcctggaggccctgaaggctgccgactgtgct
gggaagctgtttgtgttccacacctctctgcccatcgccgaagctcctggaaaactgaaa
aacagggaggacaagaagctgatcggcacggataaggagaaggctctgttccagccccag
atcagcttctacaacagcctggccaaggactgcgtggcccagggctgctgcgtggacctc
ttcctctttcccaaccagtacgtggacatggcaacgttaggggtggttcctgtgtccacc
ggaggctctgtctataaatacacctacttccaggctgagacggacaaggagcagttcctc
aacgatctccgccgcgacgttcagaagctcatcggcttcgacgccgtcatgagggtgcga
accagcacaggaatccgagcgacggacttctacggctccttcttcatgagcaacaccacg
gacgtggagctggcaggtctggactgtgacaaggccgtgacggtggagttcaagcacgac
gacaagctgagcgaggagacgggggctctgatgcagtgcgccgtcctctacaccagctgc
agcggccagcgccggctccgcatccacaacatggcggtgagctgctgctcccagctggcc
gacctctaccgcaactgcgagaccgacaccatcatcaactacttcgctaaatacgcattc
cgtggcgtcctcagcaaccccaccaaggccgtgagggacacgctggtcaaccagtgtgct
cagatcctggcctgttacaggaagaactgtgcgagtccgtcttctgctggtcagttgatc
ctccccgagtgcatgaagctgcttcctgtctacctgaactgcgtgctgaagagcgacgtg
ctgcttcctggagccgacgtctccctggacgaccgggcctacctgaggcagctggtcagc
ggcatggacgtctcggagagccacgtcttcttctacccccgactgctgccggcgatcaag
ctggaaaacgggtcgttgccggtggcgataagagactcggaggagcggctgtccaaaggc
ggcgtctacctcctggagacgggcctgcgcctcttcctgtgggtgggcgccagcgtccag
caggaggtgctgctcagcatcttcggcacgtcgagcttcagccagatcgactccagcttg
accagcctgccggtgctggagaacccgtattcccaacgcctgcgggagctcatccactcc
ttcagagcccagcgctcccgatacatgaagctgacggtggtgaaacaggaagaccgcagc
gagctgatcttcaagcgcttcctggtggaggacaagagcgccagcgggggggcctcgtac
gtggacttcctgtgccacatgcacaaggagatccgccagctgctgagctag
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