Takifugu flavidus (sansaifugu): 130533364
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Entry
130533364 CDS
T09160
Symbol
spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130533364 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tfs04812
]
130533364 (spast)
Enzymes [BR:
tfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
130533364 (spast)
Membrane trafficking [BR:
tfs04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
130533364 (spast)
Cytoskeleton proteins [BR:
tfs04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
130533364 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
TIP49
AAA_5
AAA_22
MIT
Mg_chelatase
AAA_16
AAA_14
IstB_IS21
DUF815
AAA_24
NPHP3_N
AAA_2
nSTAND3
WipA_N
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
130533364
NCBI-ProteinID:
XP_056902646
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All DBs
Position
11:complement(11254217..11258126)
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AA seq
472 aa
AA seq
DB search
MNASKNKDSGEVIKNYHQQAFEYISRALRIDEDDTGEKEQAVQWYKKGIAELERGIAVEL
TRGGDQYERARRLQDKMITNLSMAKDRLALLESTLESKKSSVPRRTPNHAVPQAKGVPKG
QPAPRGAGTNRSLTSVRPASKFTDFKVSPQAGKDQNGKNLAVKAPRRDMKNFKNVDSKLA
SLILNEIVESGASVSFEDIAGQELAKQALQEIVILPALRPELFTGLRAPARGLLLFGPPG
NGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDS
LLCERREGEHDASRRLKTEFLIEFDGVQSRGDDRVLVMGATNRPQELDEAVLRRFPKRIY
VAMPDTETRFTLLKNLLGKHRNPLSQAELSSLAKNTSGYSGSDLTSLAKDAALGPIREMG
PEQVRNMSASEMRNIQMKDFEHSLKRIRPSVSPATLTLYARWNKDFGDTTAF
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaagtaaaaacaaggacagcggggaagttattaaaaactaccaccagcaggcg
tttgaatatatttcaagagcactgaggatcgacgaagacgatacaggagagaaggaacag
gcggtgcagtggtacaagaaggggatcgctgagcttgaaagaggcattgcagtggagctc
acccgaggaggagatcagtatgaacgagcgaggagacttcaagataaaatgatcaccaat
ctcagtatggcaaaggataggctcgccctcttagagtcaacactggaatctaaaaagagt
agcgttcctcgacgaaccccgaaccatgctgttccacaagcaaaaggggtaccgaaaggt
cagcctgcacccaggggtgccggcaccaaccggtctctcacctcggtccggcctgcctcc
aaattcactgacttcaaggtctccccgcaggcaggaaaagatcaaaatgggaaaaattta
gccgtaaaagcgccaaggagggacatgaaaaactttaagaacgtggacagcaaattggcc
agtttgattctgaatgaaattgttgaaagtggagcatctgtatcatttgaagacattgct
gggcaggaacttgccaaacaggccctccaggaaatcgtcatccttcctgccttaaggcca
gagctgtttactggtctcagagctccagcacgtggcttgctattatttgggcctccaggg
aatgggaaaacaatgctggccaaagccgtcgcagcagagtcaaatgcaacgttcttcaac
atcagtgctgccagtttgacctccaaatatgtgggagaaggtgaaaaacttgtgcgagcg
ctttttgccgtggccagagagttacagccgtccatcatcttcatcgatgaagtcgacagc
ttgctgtgtgagcggcgcgaaggagagcacgacgcttctcgcagattaaaaaccgagttc
ctcatcgagttcgacggggtgcagtctcgaggggacgatagggttcttgtaatgggagca
accaacaggccgcaggagttggatgaagctgtcctgaggcgtttcccaaaaaggatttat
gtggcgatgccagatacagagaccaggttcacactgttgaaaaatctcctgggaaaacac
cggaatccactgagtcaagctgagctgtcctcccttgcaaaaaacacctcaggatattca
ggaagtgacctcacatcgttagctaaagatgctgcactcggtccaatcagagagatggga
ccagaacaagtgcgaaacatgtctgctagcgagatgcgcaacatccagatgaaagatttt
gagcattctctgaagcgcatcaggcccagtgtgagcccagcgaccctcacgttgtacgcc
agatggaacaaggattttggtgacacaacagcattttaa
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