Takifugu flavidus (sansaifugu): 130533451
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Entry
130533451 CDS
T09160
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130533451 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tfs04990
]
130533451 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
tfs04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
130533451 (pdlim1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
LIM
PDZ_2
Motif
Other DBs
NCBI-GeneID:
130533451
NCBI-ProteinID:
XP_056902840
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All DBs
Position
11:complement(2659696..2664644)
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AA seq
319 aa
AA seq
DB search
MPLRVVMQGPGPWGFRLVGGKDFEQPLTISRVTPGSKAAQANLCIGDMILAIDGESTEHM
THLEAQNKIKGCIDEMVLSVDRSEIKLWSPLSSEGGKTHPYKMNLESEPKEVKHIGSSHN
RSALPFGSKVVTNQYNNPAGLYSSENIKDFNSAVDEVKTMATANEANAKAPSEPTQMGQR
PPVAADSEVYKMLQENQESDEPPRQSASFRVLQEILETGDSDKPSGFRSVKAPSTKVGSS
VGNTQKLPVCDKCGSGIVGAMVKLRDKFRHPECYTCTDCDVNLKQKGHFFVEDKIFCEKH
ARERVVPPEGYDVVTVFPK
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgggtagtgatgcagggtcccggaccctggggattcagactcgttggaggg
aaagacttcgagcaaccgctgactatttccagggtcacccctgggagcaaagctgctcag
gccaacctgtgtatcggagacatgatcttggcgatcgacggagagtccacggagcacatg
actcacttggaagcacagaacaaaatcaaggggtgcattgatgagatggtgctctctgta
gacaggtcagagattaaattgtggtcaccgctttcatccgaaggagggaagacgcacccg
tataagatgaaccttgaatcggaaccaaaggaagtgaagcacatcggctccagccacaac
aggagcgctcttccctttggctccaaagtggtgaccaaccagtacaacaaccctgctggt
ctgtactcctcagagaacatcaaggactttaactctgctgtggatgaagtgaaaaccatg
gccacagctaacgaggccaatgctaaagctccatcagagcccacacaaatggggcagagg
cctcctgtcgcagcagattcagaagtttacaagatgctgcaggagaaccaggagtctgat
gagccgcctcgacagtcggcttcattcagggtgcttcaggagattctcgagacgggcgac
tctgacaagccgtcaggttttcgaagtgtgaaagctccctcgacaaaggttggatcatct
gtggggaacacgcagaaactgcccgtgtgcgacaagtgtggatctgggattgtgggagcc
atggtcaagctgagggacaagttccgccaccctgagtgctacacctgtacagactgtgat
gtcaaccttaaacaaaagggacatttctttgtcgaggacaagattttttgcgagaagcac
gcacgggagcgagttgttcctccagagggctatgacgtggtcaccgtcttccccaagtag
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integrated database retrieval system
