Takifugu flavidus (sansaifugu): 130533771
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Entry
130533771 CDS
T09160
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04010
MAPK signaling pathway
tfs04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130533771 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
130533771 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130533771 (nfkb2)
Transcription factors [BR:
tfs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
130533771 (nfkb2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
Ank_KRIT1
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
130533771
NCBI-ProteinID:
XP_056903435
LinkDB
All DBs
Position
11:complement(9372320..9380495)
Genome browser
AA seq
878 aa
AA seq
DB search
MAGALRMTEAQYINVYENDLQMNLMQYDYIPPVDIKTEPYIPETAHGPYIQIIEEPKQRG
FRFRYECEGPSHGGLPGASSEKNRRTYPTVKISNYVGHARVEVQLVTHTDPPRVHAHSLV
GRHCTENGTCMVDVGPNDLTASFSNLGILHVTKKSVVEVLNKRLREERRRQKAAHCLLTD
LEESSILKEAKELGKVMDLNIVRLKFTAYLQDSNGGFTRALKPVVSNAIYDSKSPNASNL
KISRMDKTCGTVLGGDEIFLLCDKVQKDDIEIRFYEEDEGGWEAFGDFSPTDVHKQYAIV
FKTPPYHSAEIERPVTVFLQLKRKKAGDSSDPKQFTYIPHVQDKEEVLRKKQKPLPHYES
WRGGAGGGAGFGGGGGGGGGGGGGYQFNQQMNGGGGVFFPGFTGFNGGGGAQMSCSAPPS
QRVGQPRGQSAAAPLQHQLFQIATALHNRVSQSARQTAAALLQYCSTGDARVLLAVQRHL
CGVQDTNGDTPLHLAIIHQQTGVIQQLIQTLLSSQQQNILNTANHLLQTPLHLAVITRQV
KVVEMLLRAGVDPSLLDKDGRSPVHLASLAGDSAVLRLLLAHLGESHAHVVNSSDYHGLH
PLHLAVRRDGERCLRLLVEGGAKINAPEQKSGNTALHLAVRENLFKVACTLITELKAEVN
ACSFGGNTPLHLAASLGSPTLCSMLVAAGADKNVENDEPLVCSSSSDEDEPDGETRQAVT
RKRGHTPLDLANCQKVRNLLNSRNSPKSNCSSSKKMKPTSEGAESTSLDEDTVTQLMDVL
SDTDVPWMRLAEKLGMKTLSQLYVDSKAPCLHLLQHYKLAGGPVQVLIEALQDLGLSEGV
RLLRNTERQHEKHNTEATVDSGFSSQPMEEEPEPVANQ
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggctggagccctcaggatgactgaggctcagtatatcaacgtctacgaaaacgatctg
cagatgaatttgatgcagtacgactacattcctccagtggacataaagacggaaccttac
atacccgagacagctcacggtccgtacatccagatcatcgaggagcccaaacagagagga
tttcgcttccgttacgagtgtgagggtccgtcccacggtggacttccaggagcctccagt
gagaagaaccggagaacctaccccaccgtgaagatcagtaattacgtgggtcacgcccgc
gtagaggtgcagctggtgacgcacaccgacccccctcgcgtccacgcgcacagcctggtg
ggccgtcactgcaccgagaacggcacctgcatggtggacgtgggccccaatgacctcaca
gcctcattcagcaatctggggatcctccatgtgaccaagaaaagtgtggtggaggtcctg
aacaagaggctcagagaagagaggagacgacagaaagccgcccactgtctcctgacagat
ttggaggaaagctccatcctgaaggaggcgaaggagctggggaaggtgatggacctgaac
atcgtcaggctgaagttcaccgcgtacctgcaggacagcaacggcgggttcacacgggcg
ctgaaacctgtcgtctccaacgccatctatgacagcaaatctccgaatgcctccaacctg
aaaatctcacgcatggataagacgtgcgggacggttctgggaggggacgagatcttcctg
ctctgcgacaaagtccagaaagacgacatcgagatccgtttctatgaggaggatgaggga
ggctgggaggcgtttggcgacttctcacctacagatgttcacaaacagtacgccatcgtg
ttcaagacgccgccctatcacagcgcagagatcgagcgtcccgtcaccgtgttcctgcag
ctgaaaaggaagaaggccggcgacagcagtgacccgaaacagttcacctacatccctcat
gtccaagacaaagaggaggtgctgagaaagaagcagaaaccactgcctcactacgagtcc
tggagaggaggagctggaggaggagccgggtttggaggaggaggaggaggaggaggagga
ggaggaggaggataccagtttaaccagcagatgaacggaggaggaggggttttcttccct
ggcttcactggttttaacggagggggcggggctcagatgtcatgctccgcccctccatca
cagagggtcggacagccgaggggacagagcgccgctgcgccactgcagcatcagctgttt
cagatcgcaaccgccctccacaacagggtgtctcagagtgcccggcagaccgccgccgcc
ctgctgcagtactgcagcaccggagacgcccgggtcctgctggctgtccagagacacctg
tgtggggtccaggacaccaacggagacactccgctgcacctggccatcattcaccagcag
acaggagtgatccagcagctgatccagactctgctgagcagccaacaacaaaacatcctc
aacacggccaatcacctgctgcagacgcctctgcacctcgccgtgatcacccgccaggtg
aaggtggtggagatgctcctgagggcgggagtcgaccccagtctgctggacaaagatggc
cgcagtcccgtccacctggcatcgctcgctggtgacagcgccgtactccgcctcctactg
gcccacctgggagaaagccacgcccacgtggtcaacagctccgactatcacggtctccat
cctctccacctcgccgtgaggagggacggcgagcgctgcctccgcctgctggtggagggc
ggagccaaaatcaacgcgcccgagcagaagagcggaaacaccgccctccacctggctgtg
agggagaacctgttcaaggtggcctgcacgctgatcacagagctgaaggcggaggtcaac
gcgtgctcgtttggcgggaacacacctctgcacctggccgccagcctgggctcgccgacg
ctctgctcgatgctcgttgctgcaggcgccgacaaaaacgtggagaacgacgagccgctc
gtctgcagctcctcctcagatgaagacgagccggatggagagacccggcaggcggtcacg
cgcaagcgaggacacacccccctggacctcgccaactgtcaaaaagtgaggaacctgttg
aactccagaaacagtccaaagtccaactgttccagcagtaagaagatgaaacccacctct
gaaggggcggagtctacgagcctggacgaggacacggtgacccagctcatggacgtgctg
agcgacacagatgttccctggatgaggctggcagagaaactgggcatgaaaacgctgagt
cagctgtacgtggactcaaaggcgccgtgtcttcacctgctgcagcactacaagctggcg
ggaggtccggtccaggttctgatcgaagctctgcaggatctcggcctgtccgaaggagtt
cgacttctgagaaacacggaaaggcaacacgagaaacacaacactgaagccaccgttgac
agcggcttcagcagccagccgatggaggaggagccggagccggtggccaatcagtga
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