Takifugu flavidus (sansaifugu): 130533839
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Entry
130533839 CDS
T09160
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130533839 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130533839 (vps8)
Membrane trafficking [BR:
tfs04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130533839 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_Vps41
WD40_CDC20-Fz
TPR_VPS8_2
zf-RING_Vps41
zf-RING_UBOX
Clathrin
zf_RING_Vps8_fungal
zf-RING_5
zf-RING_11
zf-RING_2
ANAPC4_WD40
PHD_4
Beta-prop_EML_2
zf-C3HC4
zf-rbx1
WDR55
zf-C3H2C3
EIF3I
PHD
Motif
Other DBs
NCBI-GeneID:
130533839
NCBI-ProteinID:
XP_056903531
LinkDB
All DBs
Position
11:2210677..2228225
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AA seq
1407 aa
AA seq
DB search
MCFLCERASFRPYQHTEMSDSPDARSLLSASSQLNLMEVDAIDDKEFDIPQVDTPPTLES
ILNELEDEEEPFVLEDTCVLNTDNMDAHSCDTSSLASSDSGDPVHHKRRRRTVDMKPTLH
GSVLRHSLLKGISAQIISAADKVDAGLPTAITMSGVIVVGTSHGLALVFDTNQALRLCLG
NKATGADYGAVSALSINHDCSRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAILHLK
FTDDPTLAVCNDSGGSVFELAFRRVMGMRSCDSRCLFSGSKGEVCSVEPLHAPPEARDHP
ITHYSLLAMASLTKILVIGLKPSLKVWITFPYSKSDPSSVPQLAWQFVPVQRTVNPVLAF
SKGDTVHFLLVKKEETGTIHVIKQRQLHVSCDIISLCWINSRTLVLVDSHEKLQVVDRPS
QEVLETLDLEQVQLVYNSRHFKSLATGGNVSQALALVGEKACYQSVSSYAGQIIYLGTKS
AHIMTLRAWRERIDCLLKLEHFPEALSLAWSFHEGTAKAVVGLFGDPVKRKGVVADKMVE
MIFQFADFALKKCPEQGKIQVLEQHFHEVVPVLVDYCLLLKRLDLLFNQLYPQLVENMVA
KGIFLESLESYIIADRLGHLPTPVMKDLLTHYQSSCMMESLERCIVHLDITSLDIQQVVQ
VCWENQLYDAVIYVFNRGMNDYTTPMEKLFAVIVPPVREGKSLTDVEVVMGNKLLVYISC
CLAGRAYPLGDIPEDLVVQVKHQVFEFLIRRHSADSSEEEEVFPFIRTLLHFDTREFLNV
LAMTFEDFKNDKQALEYQQRIVDILLQVMVDNPDFTPSQVGGLFTFLARQLAKPDNTLFV
NRKLFDQVLEFLCCPDDDSRHTERQQVLLELLQVGSVVQFNEERLLMLAEKAKFYQICEF
LYEKQHLYDRIIDCYLRDPLRKGEVFSYVHNLLSMPGYSPEEKQSVKDKVRQHMHELVIF
DPNKSADLVTFHFAEEVQQIISELQDDRLLFRFLSCLLEQQDGQHSGPVLLLQPELHELQ
LDLLSRFDPKHILNFLQTSQHYRLEEAVQITQKYHHNKATAFLLEKRGDVEGAFAVLLET
LKENLSLVTAERAGDDEEETLTNVKDSLSDIISLCHQSSQSLNQQQREVLWFPLLETMMA
AQKQVKGRDSKHTFEVLKELTMKVLNRMSSFISLPAIIQRILQDPVYGKGKLAEIQSLIL
GMLDTFNYEQTLLETTTSLLNHDLHWSLAHLRAAVTRGIHPRQDCCNICLQQYKRRQDAA
AADEIIVFSCGHLYHLQCLQQKDSGWGFTSDVQQQWSCYKCSSSKGGRAASADSRGRSLS
LAQTCVTSLQHDGATEADGKKGFVEVTLDHQQEQSWDQLRCLLRGPSRLSILSELSHSNE
KTGLLIGSQTGTDHFQLKLAPPPLFEE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcctgtgcgaaagggcgagctttcgtccatatcaacacacagaaatgtcagat
tctccagacgccagaagcttgctgtctgcctcctcgcagcttaatttgatggaggtggac
gcgattgatgataaagagtttgatattccccaagtggacacacctcctacactggagagt
attcttaatgagctggaagatgaagaggagccatttgttctggaggacacgtgtgtgctg
aacactgataacatggatgctcactcctgtgacacttcctctctggccagttcggacagt
ggagatcctgtacaccacaaaaggaggaggagaacagtggacatgaaaccaacacttcat
ggctctgttctgcgccatagcttgctaaaaggcatctctgcacagatcatctctgctgct
gacaaagtggatgccggactcccaactgctataacaatgtcaggtgtgattgttgtgggg
acgtctcacggtctggctctggtctttgataccaaccaggctctgcgcctctgcctgggg
aacaaagcaaccggggcagattacggagctgtatctgccctcagcatcaaccatgactgc
tcacgtctgctctgtgggtttgccaagggacagattacaatgtgggatctcgccaatgga
aaactcctgagaactattactgatgcacaccccccagggacggctatacttcacctgaag
tttacagacgatccaactcttgcagtttgcaatgacagtggaggatccgtgtttgagctg
gcgttcaggagagtgatggggatgcgctcctgtgactctcgatgtctcttcagcggttcc
aaaggggaggtgtgctctgttgaacccctgcatgctcctccagaggccagagatcacccc
atcacccactattctctcctggccatggcctctctcactaagattctggttattggcctg
aagccctcacttaaagtctggataacgttcccctacagtaaatctgatccgtccagtgtt
ccccagctggcctggcagtttgttccagtccagagaaccgtgaaccccgtcctggccttt
tccaaaggagatacagttcacttcctcttggtaaaaaaggaggaaacgggcaccatccat
gtcatcaaacaaaggcagctccatgtcagctgtgacatcatcagcctctgttggatcaac
agccgcacgctggtcttggtggacagccatgaaaaactgcaggttgtggaccgacccagt
caggaggttttggagaccctcgacttggaacaggtgcagctggtttataacagcagacat
ttcaaatcgctggccactggagggaatgtctcccaggctctggctctcgttggagaaaag
gcctgttaccagtcggtctccagctacgcgggacagattatatatctgggcaccaagtct
gctcacatcatgactctcagggcctggagggagcggatcgactgtctgctgaagctggaa
cattttcccgaggccctgtctctggcctggtcgttccacgaggggacagctaaggctgtg
gtcggtctgttcggagacccggtgaaaagaaaaggagtcgtggctgacaagatggtagag
atgattttccagtttgcagactttgccctaaagaagtgtccagaacaaggaaagatccaa
gtgctggaacaacacttccatgaagtggttccagtcctggttgattactgtttgctgctg
aagaggcttgacctgctgtttaaccagctgtaccctcaactggtggagaacatggtggct
aaaggcatcttcttggaatccctggagtcctacattatcgcagaccgccttggtcacctt
cccacaccggtcatgaaagaccttctcacgcattaccaaagcagctgtatgatggagagc
ctggagagatgcatcgtccatctggacatcaccagcctggacatacagcaggtggttcaa
gtgtgttgggagaaccaactctacgatgcggtgatctacgttttcaatcgtggcatgaac
gactacactacacctatggaaaaactctttgcagtaattgtcccaccagtaagggagggg
aagagtcttacagatgtggaagtggtgatgggaaacaaactcctggtgtatatcagctgc
tgtctggcaggacgggcatatccattaggagacatccctgaagaccttgtggtccaggta
aagcatcaggtgtttgaatttttgatccgtcgccattcggcggactcctcagaggaggaa
gaagtgttcccgtttattcgcactctgctccactttgacactcgagagttcctcaacgtc
ctcgccatgacattcgaagacttcaagaacgacaaacaggcccttgaataccagcagagg
atcgtggacatcttactgcaggtgatggtggacaacccagactttactccgtcccaggtg
ggaggactcttcacctttttagcgcgacagttggccaaaccagacaacacacttttcgta
aacaggaagctcttcgatcaggtcctggagtttctgtgctgcccagatgacgactcccgt
cacactgagaggcagcaggttctgttggagctgctgcaggttgggagcgtggtccagttt
aatgaagagaggcttctgatgctggccgagaaagccaaattctaccagatatgtgaattt
ctttatgagaagcaacatctctacgacaggatcattgactgttacctgagagaccccctc
agaaagggagaggtcttcagctacgtccacaatctgctgtccatgcctggttacagccct
gaggagaagcagtcagtcaaggataaagttcggcagcatatgcatgagctggtgatcttt
gaccccaataaatcagctgatttagtgacgtttcactttgctgaagaggtccagcaaata
atctctgagcttcaggatgatcggctgctcttcaggttcctcagctgtctcttggagcaa
caggacggccaacattcgggccccgtcctactgctgcaacctgaactccacgagcttcag
ctggacctgctcagccgttttgaccccaaacacattttgaatttcctccagacctcccaa
cactatagactagaagaggcagtacagataacacagaagtatcaccacaacaaagctaca
gcctttcttttggagaagaggggcgatgtcgaaggagcttttgctgtgctgttggagacg
ctaaaggaaaacctgagtcttgtcacagctgagagagcaggagatgatgaagaggaaacc
ctgacaaatgtcaaggattctctaagtgacatcatctccttgtgtcaccagagctctcag
agccttaaccagcagcaaagagaggtcctgtggtttccactgctggagaccatgatggct
gcacaaaaacaagtgaagggacgggacagtaaacacacatttgaggtgctgaaggagctg
acgatgaaggtcctcaaccgtatgagcagcttcatttctcttcctgccatcatccagcgg
atactccaggatccagtctacgggaaaggaaagctggcagaaatccagagccttattttg
ggcatgctcgacactttcaactatgagcagacgctacttgaaacaaccaccagtttgttg
aaccatgacctccactggtccctggcgcacttgcgcgcagcggtcactagggggatccac
ccacgacaggactgctgcaacatctgcctgcagcagtacaagaggaggcaggatgcagca
gcagcagacgagatcatcgtgttcagctgtgggcatctgtaccacctccagtgtctgcag
cagaaggactccggctggggttttacgtcagatgttcagcagcagtggagctgctacaaa
tgttcctccagcaaaggaggccgagcggcgtcggctgattcgagaggccgcagcttgtcc
ctagcgcagacctgcgttacatcattacaacacgatggggcaacagaagctgacgggaag
aaggggtttgtcgaagtcaccttagaccatcagcaagaacagtcctgggatcagctacgc
tgccttttaagaggaccgtccaggctgtccatcctgtccgaactttcacacagtaacgag
aagacgggccttctgatcggcagccagacggggacagatcacttccagctgaaactggcc
cccccgcctctgttcgaggagtag
DBGET
integrated database retrieval system
