Takifugu flavidus (sansaifugu): 130533860
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Entry
130533860 CDS
T09160
Symbol
si:ch211-199f5.1
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfs04515
]
130533860 (si:ch211-199f5.1)
Cell adhesion molecules [BR:
tfs04515
]
Cadherins
Protocadherins
130533860 (si:ch211-199f5.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
DNER_C
FctA
TMEM154
DUF5783
DUF4577
Motif
Other DBs
NCBI-GeneID:
130533860
NCBI-ProteinID:
XP_056903569
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All DBs
Position
1:10515640..10519366
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AA seq
979 aa
AA seq
DB search
MVRGHFLTHWHRWILILFVNQFLFASLSLSEGNTIRYQTNEEGAPGTVIGTLAKDMSLSL
SSSKTNFRMMKQFNDSFIRVRESDGELTVGERIDRERICRHTPQCLITFDVVNFSKDRYK
LIHVAVEIRDINDNSPEFPNKESIVEISENAAVGSRVPLDPAADADVGSNYIQSYQISVN
SHFTIDVLLRADGVKYAELVLMKELDRETQSSYTVDLVATDGGHPFRSGSTKITILVTDF
NDNSPVFDQNSFSVTLPEDAPVGTVILNLNAVDADDGLNGEVVYGFGKQVSHEIRQLFQV
DHKSGRLTLRSPVDFEEKTTYELDVQATDLGANPSPSLCKIIIHITDVNDNAPEISITPM
TSMTTGIAYISEAADKDSLVALISTQDRDSGVNSQVHCSLYGHDHFKLRQAYEDSYMIVT
AASLDRERISEYNLTVMAEDFGSPPMRKIIQYTIRLSDENDNAPHFARGVTEVSVVENNP
PGAYITTVEASDADLANNGKITYRLVDSVIMGSPVNTFVSLNSVSGSLYALRSFNYEVMK
QLDVHVQASDGGSPQLQTTAVIRLKILDQNDNQPLIVEPPLYKGSAEVFLPKDSPGGYVL
TQIKATDADEGVNAQLSYKIIEGGHLGFSINKDTGKVHVSRQLTYDLSDTVKVTVAVSDN
GSPSLTSTAIIHVSFTEGTLPSVPSLAQNDSEVFFEWDTSIAIIIVLAGSCSLLLLAIIL
ITTICNRRRKETREGARDEKEDVPDVEKVESSHIDSLIANHKGKVFDAHPLPENPPLASG
NATETSCEDGRQTAGMFESNSRAMEGKLKGYSTLPGYGKETVRPITIWKGNSFTTISARD
PHISGKDSGKGDSDFNDSDSDISGDVHKKESPPTNSLWACTSECKVLGHSDRCWSPSATR
PNTSMACGAQMSTFSRTASLPRDTRRENYYPSHIPKSNGLQSVYEQVQHQEFDYILVGPP
TPARIQETDEISIPEYTNS
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggtccggggacattttctcactcattggcaccggtggattttaatactcttcgttaat
cagtttttattcgcttcgttgtctctgtccgagggaaatactattagataccagaccaat
gaggagggcgcaccaggtacagtcatcggaacccttgccaaggacatgtccttgagtctg
tcttcttccaagaccaattttagaatgatgaaacaattcaatgattcattcattagagtg
agagaaagcgacggggagctcacagtcggggagcgaattgacagggaaagaatctgcaga
cacactccacagtgcctcattacttttgacgtagtaaatttctccaaagatcgctacaaa
ttgatccacgtcgcggtggaaataagggacatcaatgacaactccccggagtttccaaac
aaggaatctatagtggagatctccgagaacgcggcggtgggctcccgcgtccctctagac
ccagccgcggacgcagacgtcggctcaaactacatccaaagctatcaaatctctgtcaac
agtcattttactatcgacgtgctcctgagagcggatggggttaaatatgcggaattggtg
ctaatgaaagaactagacagggagactcagtcctcgtacaccgtggatctggtcgcaact
gacggaggacatccgttcagatccgggtccacaaaaataactattctggtgacggacttt
aatgacaacagtccagtttttgaccagaacagcttttccgtcactctgccggaggacgcg
ccggttggcaccgtcatcctcaacttaaacgcagttgacgccgacgacggtttgaacgga
gaggtggtgtacgggttcggaaaacaggtttctcacgaaatccgacaacttttccaagtg
gatcataaatcggggcgcctgacgctccggagccccgtggatttcgaggagaaaaccacg
tacgagttagacgtgcaggcgaccgatctgggcgcgaacccgagcccgtccctgtgcaaa
atcatcatccacatcaccgacgtgaatgacaacgctccggaaataagcatcaccccgatg
acctctatgacgacgggcatcgcgtacatcagcgaggcggcggacaaggacagtctggtg
gcgctgatcagcacccaggacagagactcgggtgtgaacagtcaggtccactgctcctta
tacggacacgaccacttcaaactgagacaagcctacgaggacagctacatgatcgtgaca
gcagcctcgttagaccgggagaggatcagcgagtacaacctgacggtcatggctgaggat
ttcgggtcccccccaatgaggaagatcattcagtacacaatcaggctcagcgatgagaat
gacaatgcccctcacttcgccagaggtgtcactgaagtttctgtggtggaaaacaacccc
cccggggcttacatcaccacggtggaggccagcgatgccgatctggccaataatggcaaa
atcacttacagactggtggacagtgtaatcatggggtctccggtcaacaccttcgtgtcc
ttgaattcggtgtcaggctctttgtatgcgctgaggagctttaattacgaggtaatgaag
cagctagacgtgcacgtccaggcgagtgatggggggtcaccacagctgcagaccacagct
gtcatccggctaaaaatactcgatcagaatgacaaccagcccttgatcgtggagccccct
ctttacaaaggatccgctgaggtttttctgcctaaagattcacccgggggctatgtacta
acccagataaaggccacagacgctgatgagggcgtcaacgcacagctgtcctataaaatc
atagagggaggtcacctgggcttctccatcaacaaagacacggggaaggtgcacgtgagc
cgacagctgacgtatgatctctcagacactgtcaaagtcacagtggcggtcagcgacaat
ggatccccctcgctcacttccacagctattatacacgtgagcttcactgaaggaactctg
cccagtgtgccctccctggcccaaaatgacagcgaagtgttttttgaatgggacacgtcc
atcgccatcatcatcgtcctggcagggagctgctctctcctcctgctggctattattctc
atcacaaccatttgcaaccgcaggaggaaagagaccagggagggggcgcgtgatgaaaaa
gaagatgtcccagatgtggagaaagtggaaagcagtcatattgattcattgattgccaac
cacaaaggaaaagtgtttgatgctcatccattgccagagaatcctccactagccagcggc
aatgcaacagagacaagctgtgaagatggcaggcagacagcaggcatgttcgagtccaac
agcagagcgatggagggcaaattaaagggttactccacactgcccggctatggaaaggaa
acagtcaggccaataacaatctggaaaggtaactcatttacaacgatctcagccagagat
ccccacatcagcggcaaggacagcgggaaaggggacagcgacttcaatgacagcgactca
gacattagtggagatgtgcacaaaaaagagtcgccaccaacaaacagtctgtgggcctgc
acaagtgagtgcaaggtgctcggacactcggaccgctgttggagtccctcggctacaagg
cccaacaccagcatggcctgcggagcgcaaatgtcaacgttctccaggacagcttcgctt
cctcgggacaccaggagggaaaactactacccgtctcacatacccaaaagcaacggactg
cagagcgtctacgaacaagttcagcaccaggagttcgattatatcctcgtcggcccgccg
acaccggctcggatacaggaaacggatgagatttccatcccagagtacacaaactcttga
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