Takifugu flavidus (sansaifugu): 130533934
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Entry
130533934 CDS
T09160
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03430
Mismatch repair
tfs03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
130533934 (mlh1)
03460 Fanconi anemia pathway
130533934 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130533934 (mlh1)
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
130533934 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
130533934
NCBI-ProteinID:
XP_056903703
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All DBs
Position
11:3096897..3102342
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AA seq
725 aa
AA seq
DB search
MAGVIRRLDETVVNRIAAGEVIQRPANAVKELIENCLDAKSTNIQVTVKDGGLKVLQIQD
NGTGIRREDMEIICERFTTSKLQTFEDLSAIATYGFRGEALASISHVAHVTITTKTADAK
CAYRASYTDGKLKGPPKPCAGNQGTQILVEDLFYNVSTRRKALKSPTDEYSRIVDVVSRY
AIHNSGKSFSVKKQGETVADVRTLANASVVDNIRGVFGNAVSRELIEVACEDQKLAFKMK
GYVSNANYSVKKCILILFINHRLVESSMLKKAIENVYGAYLPKNTHPFLYLSLQIAPQNI
DVNVHPTKHEVHFLHEDSVIESVQKHIESKLLGSNSSRTYFTQTLLPGLSVSGASEVKPS
IVALESAERVYAHQMVRTDCRAQKLDAFLQPKEKQLPEPAGPSCTEAAVDPAKSDRADFD
EMDTADLLEAVDEQGGEVVMDVKDSSAQRKRPRNEQNKDEDEALTAAATPKRRVIKLTSI
KELRAEMCENTHTGLQEMLQNHSFVGCINLQWALIQHRTKLYLLNTTNLSQELFYQILIY
DFGNFGVLRLSEPAPLYDLAMLALDSEGSGWTEEDGPKEGLAQYIVDFLKRKAEMLGDYF
SVEVDQEGNLTGLPLLLDKYTPIMEGLPMFILRLATEVNWDNEKECFRDFSRECSMFYSI
RKEFILDGEPGEEQETEVTSWRWKVEHVIFKAFRMLFSPPKKFSEDGTVLQIANLPDLYK
VFERC
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgttatccggaggctcgacgagactgttgtcaaccgaatcgccgctggtgaa
gttatccaacgtcctgctaatgccgtcaaagaactgatagagaactgtctggatgccaag
tccaccaacatccaggtgacagtgaaagatggcggactgaaggttctacagattcaggat
aacggcactggcattaggagggaagatatggaaataatctgtgaaaggttcaccaccagc
aaactgcagacctttgaggacctctcagctattgcaacctatggatttagaggagaggcc
cttgctagtataagtcatgttgcgcatgtgaccattacaacaaaaacagctgatgccaaa
tgtgcctacagggccagctacaccgatggaaaactgaaaggaccacccaaaccttgtgct
ggcaatcagggaactcagattcttgtggaggatcttttctataatgtgtccacaaggaga
aaagctttaaaaagccccactgatgagtactcgaggattgtagatgttgtcagtaggtat
gccatccataactcaggaaagagtttttctgtcaaaaagcaaggagagactgtagcagat
gtgaggaccttagccaatgcatctgtggtggataatatccgaggagttttcggcaatgct
gtcagcagggagctgattgaagttgcctgtgaggatcagaagctcgccttcaagatgaaa
ggctacgtctctaatgcaaattattcagtgaagaaatgcatccttatcctcttcattaac
catcgtctggtggagtcgagcatgttaaagaaagccatcgaaaacgtttacggcgcctat
cttcccaagaacacgcacccctttctttacctcagtttacagatcgctcctcagaatata
gatgtcaatgtccatcccacaaagcacgaggtccactttttgcatgaagacagtgtcatt
gagagtgttcagaaacacatcgagagcaaacttcttggctccaattcatcccgtacctac
ttcactcagacattgctcccagggctatcggtctcaggtgccagtgaagttaagccttcc
atcgtggcattggagtccgctgagcgagtctacgcgcatcagatggtgaggacggactgt
cgcgcgcagaagctggatgctttcctccagccaaaagaaaagcagcttcctgaaccagcc
gggccaagctgcacagaggctgcggttgatcccgccaagtctgacagagctgactttgat
gaaatggacactgctgatctgttagaggctgttgatgaacaggggggagaggtagtaatg
gatgtcaaagacagtagtgcacaaagaaaacgaccccggaatgagcagaacaaggacgag
gatgaggcgctcacagctgcagccacacccaaaagacgagttataaaactgaccagtatt
aaagagctcagagctgagatgtgcgagaacacgcacacagggcttcaggaaatgctgcag
aaccactcatttgtgggttgcatcaacctccagtgggctctgatccaacatcgcactaaa
ctgtacctgcttaacaccaccaacctcagccaggagcttttctaccaaatattgatctac
gactttggaaactttggcgttctgagactctctgaacctgctccgctttatgatctggcc
atgctggctctggactccgaaggcagtggctggacagaagaagatgggcctaaagaaggt
ctggcccagtatatagtggatttcctgaagaggaaagcagagatgctgggtgactacttc
tccgtggaggttgaccaggaaggaaacctaacaggattgccattactgcttgacaagtac
acccccatcatggagggtctcccaatgtttatcctgcgcctggccactgaggtgaactgg
gacaatgaaaaggagtgcttcagagacttcagcagggagtgcagcatgttctactccatc
aggaaagaattcatcctggacggggagccaggagaggagcaggagaccgaggtgacctca
tggcggtggaaagttgaacacgtcatctttaaggctttccggatgctcttcagtcctcca
aagaagtttagcgaggacggaactgtgttgcagatcgccaacctccctgatctttataaa
gtgtttgagaggtgttga
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