Takifugu flavidus (sansaifugu): 130533973
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Entry
130533973 CDS
T09160
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 1-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04517
IgSF CAM signaling
tfs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130533973
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130533973
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tfs04812
]
130533973
Cytoskeleton proteins [BR:
tfs04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130533973
Intermediate filaments
Intermediate filament-binding proteins
130533973
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
DUF7854
Motif
Other DBs
NCBI-GeneID:
130533973
NCBI-ProteinID:
XP_056903808
LinkDB
All DBs
Position
11:complement(4148844..4202053)
Genome browser
AA seq
2344 aa
AA seq
DB search
MTSVASEFEHMDIQQQFNDGVNNRWDTDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGEKLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYSNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALKVEGKRIGKVLDHAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVFTPREGKLISDINKAWERLERAEHERELALRTELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGCDLQAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELEAESYHDIKRVTARKDNVMRLWEYLLELLKARRLRLEMNLGLQRVFQEMLYI
MDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVRNVNSNAQKFALDVED
YKPCDPQVIQDRVTHMEFCYQELSQLAAERRGCLEESRCLWKFFWEMAEEEGWIREKEQI
LSSEDHGKDLTGAFRLLSQHKALEDEMSGRAGHLQQTIRQGEELVANNHFGADKIKERIK
DIQNQWAALERLSTVRKSHLLEACNKHQFQADADDIDTWMLDILRIVSSVDVGHDEFSTQ
ALVKKHKDVAEEIGSYRPVIDALHEQSCTFPPEGAGSEAVQIRLAGIEERYKEVVELTRL
RKQALQDALALYKMFSEANACEAWIDEKEQWLNSMEIPEKLEDLEVVQHRFESLEPEMNN
QASRVAVVNQVARQLIHNGHPSEKEIKSQQDKLNTGWSQFRDLADQKKDSLNSALGVQNY
HLECNETKSWIKEKTKVIESTQELGNDLAGVMALQRKLTGMERDLVAIEVKLGDLGKEAE
RLASEHPDQSETIKGRLAEITNVWDEMKDTMKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLAEAEKLLAQHEGIKNEIRNYEEDYQKMRDMGEMVTRGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHSYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEAAEAGIKKQEDFMTTMDANEEKIVGVVDAGRRLVADGNINSERIQEKLDSIDQRXQKN
RAAAVALLQRLKDNRDLQKFLQDCQELSLWISEKMLTAQDMTYDEARNLHSKWLKHQAFM
AELQSNKEWLEKIEKDGQTLMLEKPDTETMAKEKLASLKTVWAELESTTQTKAKCLFDAN
KAELFTQSCADLDKWLASLEGQLQSDEYGKDLTSVNILLKKQQILESQVEVRQKEVEELQ
NQSQVLNQEGKGSEEVDGQRVSVERKFHLLLEPLKQRRENLMVSREIHQFNRDVEDEILW
VEERLPVAMSTDHGHNLQTVQLLIKKNQTLQKEIQGHHPRYNDIFERSQHVLREDGPTAE
PIRQRLAELQLLWQQIREETEKRHERLSEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSSVFMLKKHQILEQAVEDYADTVHQLSSTSRGLVAAGHPESERIGMRQSQVDKLYA
GLKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGSIGQERVDAVNRQADELINAGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILNRILDKHKKLPEELGRDQNTVETLQRMHTAFEHDIQALGTQVW
QLQEDAARLQSAYAGDKADDIQKREAEVLEAWKNLLAAAEARRLKLVDTGDKFRFFSMVR
DLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKMLLARK
HYASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLVLEVHQFSRDASVAESWLLGQEPYLS
SREMGQNADEVEKLIKRHEAFEKSAATWEERFAALERLTTMELLEVRRVQEEGEKKRQAL
PTESLLVDGATQQRDGNVGSQNEPASDQDSPRDNGDEAANGVTEPSPPGSPVATRKGKVN
QAATLPAKTQRKLSTSQLESFLHRKHEWEGHNKKASNRSWHNVYCVINQQEMGFYKDQKN
ASQGIPYHSEIPVSLKDAICEVALDYKKKKHVFKLKITDGNEYLFQAKDDEEMNTWISTI
SAALSGDKLEVTTSSHSTPASAARAQTLPASVTTVTAVAATTESSPGKREKDKEKRFSLF
SKKK
NT seq
7035 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcggtggcatcggagtttgaacatatggatatccagcaacaattcaacgatggc
gtcaacaaccgctgggacaccgatgactgggacaatgagaacagctcagcacgcctgttc
gagcgctcacgcatcaaagccctggcagatgaacgtgaggctgtccagaagaagaccttc
actaagtgggtcaactcccatctgtcccgggtgtcctgcaggatcacagacctctacatg
gacctgagggacggtcgaatgctcatcaaactgctggaggttctgtcaggagagaaactg
cccaaacccactaaaggacgaatgcgaatccactgcttggagaatgtggacaaggctctg
cagttcctcaaggaacaaagggttcatctggaaaacatgggctctcacgacatcgttgat
gggaaccatcgtctgacgctaggcctcatctggaccatcatcctgcgcttccagatccag
gacataagtgttgagacagaagacaacaaggaaaaaaagtcagctaaagatgctcttctg
ctctggtgtcaaatgaaaactgcaggatattccaatgtcaacatccataactttaccacc
agctggagagatggaatggcatttaacgctctcatccacaaacacagaccagacctgata
gactttgacaagctgaagaaatcaaatgctcactacaacctgcagaatgccttcaacctg
gctgagcagcacctgggcctcaccaagctgctggaccccgaagacatcagtgtggatcac
cccgacgagaagtccatcatcacttatgtagtcacctactatcattacttctccaagatg
aaagccctgaaggtggaggggaagagaattgggaaggttctggaccatgccattgagaca
gagaagatgatcgagaagtatgagtctctggcatcggaccttttggagtggattgaacag
accataatcatcctaaacaacaggaagttcgccaactctctggtgggagtccagcagcag
ctgcaggcattcaatacgtacagaactgttgagaaacctcccaagttcacagaaaaagga
aacctggaagttcttctattcaccatccagagtaagatgagggccaacaaccagaaggtc
tttacaccgagagaaggaaaactcatctctgacatcaacaaggcctgggagcgtctggag
agggcggagcatgagcgggagttggccctgaggacggagttgattcgtcaagagaaacta
gagcagctcgcccgacgcttcgatcgtaaagctgccatgagagagacgtggctgagcgag
aatcaacggcttgtctcccaggataactttggctgtgaccttcaggctgttgaagcagct
acaaagaaacatgaagccatagaaacggacattgcagcatatgaagagcgtgtccaggca
gtggttgccgtggcaaaggaactggaggcagagagttaccacgatattaaacgtgtcacg
gcccgtaaagacaacgtaatgcgtctgtgggagtacctgctggagctgctgaaggcccgt
cggctcaggctggagatgaacctgggcctgcagagggtcttccaggagatgctctacatc
atggactggatggatgagatgaagatgctgctgctctcacaggattatggcaaacatctg
cttggcgtggaggatctgttgcagaaacacgcacttgtggaagccgacattgccatccag
gccgaccgggtccgaaatgtcaacagcaatgctcagaagtttgctctggatgtagaggat
tataaaccatgcgaccctcaggtgatccaggatagggtcacgcacatggaattttgttac
caggaattgagtcagctagcagctgagcgccgaggttgccttgaggaatctcgctgcttg
tggaagttcttctgggagatggctgaagaggagggttggatcagggagaaggagcagatc
ctctcctccgaagatcatgggaaggacctgaccggtgcatttcggctcctcagtcagcat
aaagctttggaagatgagatgagcgggcgtgccggccacctacagcagaccatccgccag
ggggaggagctagtggccaacaaccattttggggcagacaagatcaaagaacgtattaag
gatattcagaatcagtgggcagctctcgagcgtctctctactgtgcgtaaatctcatctg
ctggaggcctgtaacaagcaccagttccaggccgatgcagacgacatcgacacatggatg
ctggacattctgaggattgtctccagcgtagatgtgggccacgatgagttctccactcag
gctctggtgaagaagcacaaggatgtggccgaggagatcggcagctaccgacctgtcatc
gacgctctacatgagcagtcttgcacgtttcctcctgagggggctggctccgaggcggtt
cagatcagactggctggaatcgaagagcgctacaaggaggtggtggagctgacacggctg
aggaaacaggcactgcaggatgctctggcactctacaagatgttcagcgaggccaacgcc
tgtgaagcctggatcgacgagaaggagcagtggctcaacagcatggagatccctgagaag
ctggaagatcttgaggttgtccagcatcggttcgagagtctcgagccggagatgaacaat
caggcctctcgggttgctgtggtgaatcaagttgccaggcagctaatccacaatgggcat
cccagtgagaaggagatcaaatcccagcaggacaaactaaacaccgggtggagtcagttc
agagacctggcagaccagaagaaagatagtctgaactcagctctgggtgtccagaactac
cacctagaatgcaacgagaccaagtcctggatcaaggagaagaccaaggtaatcgagtcc
acacaggagcttgggaacgacctggcaggagttatggcgctgcagagaaaactgacaggg
atggagcgcgatcttgtcgcaatcgaagtcaaactgggcgacctgggcaaggaggcggag
cgcttggcctctgaacacccagaccagtccgaaaccatcaaaggtcgtctggcagagatc
accaacgtctgggatgagatgaaggacaccatgaagaacagggaggagtccttgggtgag
gccagcaagctgcagcagttcttgcgtgacctggatgactttcagtcatggctttcacgg
acacagactgccatcgcctctgaggacatgcccaacacgctggcagaggcagagaaactg
ctggcccagcatgagggtatcaaaaatgagatccgaaactatgaggaggactaccagaag
atgcgagacatgggagagatggtaactcggggccagacagatgcgcagtacatgttcctg
cggcagcggctgcaggcacttgacactggctggaatgagctgcacaagatgtgggagaac
cggcaaaaccttctttctcagtcccactcataccagctgttcctgagggacaccaagcag
gccgaggcttttctcaacaaccaggagtacgttctggctcacactgagatgcccaccacc
ctggaagctgccgaagctggcatcaaaaagcaggaggacttcatgaccaccatggatgct
aatgaggagaagatagtcggcgttgtcgatgccggccgtcgcctggttgctgatggaaac
atcaacagtgaacgcatccaggagaagttggattccattgaccagaggtgacaaaaaaac
cgagctgctgctgtggcgctgctgcagaggctgaaagacaatcgagacctgcagaagttc
ctgcaggactgtcaagagctgtcactttggatcagcgagaagatgctgacggctcaggac
atgacttatgatgaggcccggaacctccacagcaagtggctgaaacaccaagcctttatg
gccgagctgcagtccaacaaagagtggctggagaagatcgaaaaggatggtcagacgctg
atgttggagaagcctgacacagagaccatggccaaagagaagttggcgtcattgaagacc
gtgtgggcggagctggagtccacaacacaaaccaaggccaagtgtttgtttgatgcgaac
aaggcggaactgtttacacagagctgcgccgacctggacaaatggctcgccagcctggag
ggtcagctgcagtctgacgaatacggcaaagacctgacctccgtcaacatcctgctgaag
aagcagcagatcctggagagtcaggttgaggtgcgtcagaaggaggtggaggagctgcag
aatcaatcccaggtgctcaaccaggaggggaagggctctgaggaggtggacggccagcgc
gtcagcgtggaacgcaagttccacctcttgctggagccgcttaagcagaggcgcgagaac
ttgatggtgtcacgcgagatccatcagtttaaccgtgacgtggaggatgagattctctgg
gtagaggagaggttgcctgttgccatgtccactgaccatggtcacaaccttcagactgtc
cagctgctcatcaagaagaaccagacgctgcagaaggagatccaaggtcaccacccacgt
tacaatgacatctttgagcgcagccagcacgtgctgagggaggacggcccgacagcagag
ccgattcgccagcggttggctgagctacagttgctgtggcagcaaatcagggaagagaca
gagaagcgccacgagcgccttagtgaggcccacaaagcccagcagtactactttgatgca
gctgaggccgaagcttggatgagcgagcaagaactctacatgatgtcagaagagaaggcc
aaggatgagcagagttctgtattcatgttgaagaagcatcagatcctggagcaggcggtg
gaggattatgcggacaccgtccatcagctgtccagcaccagccggggcctggtggctgca
ggacaccctgagagtgagcgaatcgggatgcggcagtctcaggtggataagttgtacgcc
ggcctgaaggatctgtcagaggagcgtcgcgggaagttggacgaacgtttccgtctgttc
cagttgaaccgggaagtggatgacctagagcaatggatcgctgagagggaggtggtggca
ggatcccacgaactgggacaggactacgaacacgtgacgatgctgcaggagcgtttcaga
gaatttgcccgtgacactggcagcattggtcaggaacgtgtggatgctgtcaaccgccaa
gctgatgagttgatcaacgcaggccacagcgacgccgccaccatcgctgagtggaaggac
ggcctgaacgaggcctgggcagacctgctggagctcatcgacacccggacgcagatcctt
gccgcctcctatgagctccataaattctaccacgatgccaaggagatcctcaaccgcatt
ctggacaaacacaagaagctgcctgaggagctgggtcgcgaccaaaacaccgttgagacg
ctgcagaggatgcacactgcctttgaacacgacatccaggccctaggaacacaggtgtgg
cagcttcaggaggacgccgcccgtctgcagtcggcgtacgcgggagacaaagctgatgac
attcagaaaagagaggccgaggttctggaggcctggaagaatctactggcggcagcagag
gcgcgtcgcttaaagttggtcgacaccggagacaagttccgctttttcagcatggtacgc
gacctcatgctctggatggaagatgtgatccgcctgattgaggcccaggagaaccccaga
gacgtgtcatcggtggagctcctgatgaacaaccatcagggaatcaaggcagagatcgac
gctcgtaacgacagcttcacagcctgcatcgagctgggaaagatgttgctggccaggaaa
cactacgcatcagaggagattaaagaaaagctgctacagttgacagacaagaggaaagag
atgattgacaagtgggaagatcgatgggaatggcttagactggtcctggaggtgcaccag
ttctcccgggatgccagtgtggccgaatcgtggctactgggtcaggaaccgtacttgtcc
agtagagaaatgggtcagaacgcagatgaagtggagaagctcatcaaacgtcatgaagcc
tttgagaaatcagcagccacctgggaggaacgcttcgccgctctggagaggttgaccacg
atggagttgttggaagtgagacgtgtgcaggaggaaggagaaaagaagagacaagccctg
cccactgagtccctgcttgtggatggtgctactcaacaaagggatggtaacgtggggtct
cagaatgagccggcgtctgatcaggactctcccagggacaatggggacgaggcagcgaat
ggggtgacggagcccagcccaccggggtcacccgtggcaacccgcaagggcaaggtgaac
caggctgcgactctgcccgccaagacccagcggaaactgtctacatcgcagttggaaagc
ttcctgcaccgcaaacatgagtgggaggggcataacaagaaggcttccaacaggtcctgg
cacaatgtctactgtgtgatcaatcagcaggaaatgggcttctacaaggaccagaagaac
gccagtcaggggattccataccacagtgagattccagtcagcctgaaggacgccatctgc
gaggtggcgttagactacaagaagaagaaacacgtctttaagctcaagatcacagatggg
aacgaatatctcttccaggccaaagatgatgaggagatgaacacatggatctcgaccatc
tcagccgcattgtcaggtgacaagttggaggtcaccaccagcagccacagcacgcctgca
tccgccgctcgtgctcagacactgccagcctctgtcaccacggtgacagctgtggcggcg
acgactgagtcaagccccggaaaacgagagaaagacaaggagaagcgtttcagtctgttc
agcaagaagaaataa
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integrated database retrieval system
