Takifugu flavidus (sansaifugu): 130534143
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Entry
130534143 CDS
T09160
Symbol
kcnma1a
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
130534143 (kcnma1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfs04040
]
130534143 (kcnma1a)
Ion channels [BR:
tfs04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
130534143 (kcnma1a)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
130534143
NCBI-ProteinID:
XP_056904059
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All DBs
Position
11:15311003..15397036
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AA seq
1274 aa
AA seq
DB search
MLAEADGTVPHGSDSSMRTSNIINKINPDSSILISKMEDVVIPFSSEVPCDNNGQRMWWA
FLASSMVTFFGGLFIILLWRTLKYLWTVCCHCNIKNKEAQKVNNPANNQPAEKKKSPDEK
EEVAPASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQ
NFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDP
WENFQNSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEI
IELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNIS
PNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCPDPDAEDASNIM
RVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQG
LSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTICELCYVKLK
LLLIAIEYKSEQRESRSRKRILINPGNHVKMQEGTLGFFIASDAKEVKRAFYYCKACHDD
ITDPKRIKKCGCKRPTYRFNGFVRSSADGATTPGNSGSQKEAGVRFKADCKLVEDEHPST
LSPKKKQRNGGMRNSPNCSPKMMSRHDPLLIPGNEQIENMDMNVKRYDSTGMFHWCPSKE
IEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMPLRASNFHFHELKHIVFVGS
LDYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIEDASLQDKE
CILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPESSPVHGFVRQASVTTGSNIPII
TELAKPGKLLPLVSLSQEKKSGTSIQMITELVNDSNVQFLDQDDDDDPDTELYLTQPFAC
GTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALLAEENALRGGYSTPQTLAN
RDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLSVPSSCTKR
YVITNPPYEFELVPTDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSVPPSNR
QNRSSKTREARDKQNATRMNRMGQEKKWFTDEADNAYPRNIQIKPMSTHMANQVNQYKST
SSLIPPIREVEDEC
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgaggcggatggcaccgttccccatggaagcgacagctctatgaggacaagc
aatatcattaataagataaacccggactcttcaatcttaatctccaagatggaagacgtt
gtcatcccgttctcgtctgaggtgccctgtgacaataatggccagcgcatgtggtgggct
ttcctcgcgtcctccatggtgacgtttttcgggggtctcttcatcatcctgctgtggcgg
accctcaagtatctgtggaccgtttgctgccactgcaacatcaaaaacaaggaggctcag
aaggtgaacaaccccgccaacaaccagccagcagagaagaaaaagagtccagatgagaag
gaggaggtggcgccggcgagcgaggtgggatggatgacctcggtcaaagactgggccggt
gtcatgatctctgctcagactctcactgggagagttctggtggtgttggtctttgcactc
agcatcggggcccttgggatctactttatagactcctcagatcccatagaatcctgccag
aacttctacaaagactttacactacagatcgacatggccttcaacgtcttcttccttctt
tactttggcctgcgatttatagcagccaatgataagctgtggttctggctggaggtcaac
tcagtcgtggacttcttcactgttcctcccgtgtttgtctccgtctacttaaacagaagc
tggctgggtttaagattcctgagagcgctgaggttgatacagttctctgaaatcttacag
tttttgaatattttaaaaacaagcaattccatcaagctggtgaacctgtgttctatcttc
atcagcacatggctcacagctgctggtttcatacatctggtggaaaactcaggggatcct
tgggaaaacttccagaattcccagtcactttcctattgggaatgtgtctatttactgatg
gttaccatgtctacagtaggctacggggacgtctatgcaaaaaccaccctgggacgcctg
tttatggtcttcttcatccttggtggtttggccatgtttgccagctacgtccctgaaatc
atagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggaga
aagcacattgtggtctgtggtcatattacgctcgaaagtgtctccaacttccttaaagac
ttcctacacaaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcc
cctaatcttgagctggaagccttgttcaaacgccactttacacaagtggagttctaccag
ggatctgttctcaacccccacgatctggccagagtgaagattgagtcagcagatgcctgc
cttatcctagccaacaagtattgtccagatcccgatgctgaagacgcctccaacatcatg
agggtcatttccatcaagaactaccatcctaaaatccgaattatcacacaaatgctgcag
tatcacaacaaggctcatctgctgaacattccgagctggaactggaaggagggcgatgac
gccatctgcctggcggagctgaaggcagggttcatcgcccagagctgcctggcccagggc
ctgtccaccatgctggccaacctgttctccatgaggtccttcatcgagattgaagaggac
acgtggcagaagtattatctggaaggcgtggctaatgagatgtacacagagtatttgtcc
agtgcctttgtgggcctctctttccccaccatctgtgagctgtgttacgtgaagctgaag
ctgttgctcattgccatcgaatataagtctgagcaaagagagagcagaagccgaaagcgc
atcctcatcaacccggggaaccacgtcaaaatgcaggagggaacactgggattctttatc
gccagtgacgccaaagaagtaaagagagcattttactactgcaaagcttgtcacgacgac
atcaccgaccccaaacggatcaagaagtgcggctgcaaacgacccacttatagatttaat
ggatttgtcagatcatcagcagatggcgctacaacaccagggaacagtggaagccaaaaa
gaggctggtgttcgattcaaagctgattgcaagttagtcgaagacgagcatccgtcaacc
ctctcgcccaaaaagaagcagcgcaacggagggatgcggaactcgcccaactgctcgccc
aaaatgatgagccgtcacgaccctcttctcatccccggcaacgagcaaatcgagaacatg
gacatgaacgtgaagcgctacgactccactgggatgtttcactggtgcccgtcaaaggag
atcgaaaaagtcatcctgactcggagcgaagcctccatgacggtgctgagcggccatgtg
gtggtctgtatatttggggatgtcacgtctgctttggtggggctgcgaaacctggtgatg
cctttaagagccagtaacttccacttccacgagctaaagcatatagttttcgtgggctcc
ttagattatctgcggagagaatgggaaaccctgcacaacttccccaaggtctccatccta
ccggggacgccgttaagtcgggcagatttgagggctgtcaacatcaacctctgcgacatg
tgcgtaatcctgtcagccaatcagaacaatatcgaagacgcctcgctgcaggacaaggaa
tgcatcttggcatcactcaacatcaagtctatgcagtttgatgacagcatcggggtctta
caggctaattcccaaggtttcacgccccctggaatggaccggtcatctccagaaagcagt
ccagtacatggcttcgtgcgccaggcttccgtcaccacgggctccaacatccccatcatc
acagaactcgctaaacctggcaaactgctgccactggtttcactcagtcaggaaaaaaag
agtggaaccagcatacaaatgataacagagctggtcaacgactccaacgttcagttcctg
gaccaggacgacgatgacgacccggacacagagctgtacctcactcagcccttcgcctgc
ggcaccgccttcgctgtcagcgtgctcgactccctcatgagcgcgacgtacttcaatgac
aacatcctgacgttgatccggacgctggtgacgggaggagccacaccagagctggaggcc
ctgctggcggaggagaacgccctgcgaggaggctacagcacgccgcagacgctggccaac
agggacaggtgccgcgtggcccagctggccctctatgacgggccctttgctgacttgggg
gatgggggttgctatggagatttgttctgtaaggctctgaagacctacaacatgctgtgt
tttggaatctacagattaagagacgctcacctcagtgttcccagctcgtgtacaaaacgg
tacgtgatcacaaacccgccgtacgagttcgagctcgtgcccaccgacctgatcttctgc
ctcatgcagttcgaccacaacgcgggccagtcccggacgagcctgtcccactcctctcac
tcctcccattcctccagcaaaaagagctcctccgtccactccgtcccaccctccaaccgg
cagaaccgcagcagtaagacccgggaagcccgcgacaaacagaatgcaacaaggatgaat
agaatgggccaagaaaagaaatggtttacagatgaagcggacaatgcctacccccggaac
attcagatcaagcccatgagcactcacatggccaaccaagtcaaccaatacaaatccacc
agtagtctgattccaccgatcagagaggtcgaggatgaatgctga
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