Takifugu flavidus (sansaifugu): 130534439
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Entry
130534439 CDS
T09160
Symbol
atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04136
Autophagy - other
tfs04140
Autophagy - animal
tfs04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130534439 (atg16l1)
04136 Autophagy - other
130534439 (atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130534439 (atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130534439 (atg16l1)
03029 Mitochondrial biogenesis [BR:
tfs03029
]
130534439 (atg16l1)
Membrane trafficking [BR:
tfs04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
130534439 (atg16l1)
Others
Specific organelles associated proteins
Auto phagosome
130534439 (atg16l1)
Mitochondrial biogenesis [BR:
tfs03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
130534439 (atg16l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
ATG16
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR3_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_ACSF4
Tricorn_2nd
Beta-prop_VPS8
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_SPT8
KASH_CCD
Beta-prop_DCAF12
EXOC6_Sec15_N
Mg296
Motif
Other DBs
NCBI-GeneID:
130534439
NCBI-ProteinID:
XP_056904483
LinkDB
All DBs
Position
12:307257..314521
Genome browser
AA seq
644 aa
AA seq
DB search
MLMSVNETKYLSSNTETKPQWLTASGYCARTRLHGVDMAERWLDCTWKRHVSEQLKLRDR
LQRQAFEELIQQYNRLLEKSDLQAVLSERYQTDKYELQRGHECSLGGDPSQRDALQQEMA
QMRIKHQEELTELHKKRGELAQSVIELNNQIQQKDKEIQSNTARMLEYQQQISSLEGECR
DLKACLQDLEKANQTLKDEYDALQITFSALEEKLRKTTEDNQELVSRWMAEKAQEANKLN
AENEKDSRRRQAKLQKELADAAKEPLPLDPDDDIEVLTEDGGKGAGEGSPNKPLTRTASS
KKISQPPPGSLLDSISNIFGRRRSTNSFSTSPENAEGPSGLCTEVRVPSTALHVFEAHDG
EVNAVKFSPGSRLLATGGMDRRVKLWEVLAGHCEPKGALTGSNAGITSIDFDSTGSFLLA
ASNDFASRIWTVDDHRLRHTLTGHSGKVLSARFLLDNTRIVSGSYDRTLKLWDLRSKVCI
KTVFAGSSCNDIVCTEQCVMSGHFDKKVRFWDIRAESIVKELELLGRVTSLDLNHDRTEL
LTCSRDDLVKIIDLRTDAIRQTFSAQGFKCGADWTRVTFSPDGVYVAGGSADGALYVWNV
LTGKLDRTLDRNHNSAINSVSWSPSGTYVASVERGSKTILWSDM
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgtcggttaacgagacaaaatatttatcctctaataccgagacaaaaccacag
tggttaacagcaagtggatactgtgcacgaactcggctacatggtgtggacatggcagag
cgctggctggactgtacctggaagagacatgtgtcggagcagctgaagctcagagatcga
ctccagagacaggccttcgaggagctcatccaacagtataaccgcctcctggagaagtca
gacctccaggctgttctgtctgagcgataccagacagacaaatatgagctccagagggga
cacgagtgcagtttgggcggagacccgagtcagagagatgcgctacaacaggaaatggct
cagatgaggattaaacatcaagaggagctgacggagctgcacaaaaaaagaggagagctg
gctcagagtgtcatcgaactgaacaaccagattcagcagaaggataaagagatccagagc
aacacggccagaatgttggagtaccagcagcagatcagcagcctggagggggagtgtcgg
gacctgaaggcgtgtttacaggacctggagaaggccaaccagaccctgaaggacgagtac
gacgccctgcagataaccttctccgccctggaggagaagctgaggaagacgacggaggac
aaccaggaactggtgtcgcgctggatggcagagaaggctcaggaggccaacaagctgaac
gcagagaacgagaaggacagcagacgcaggcaggccaagctgcagaaggagctcgccgac
gccgccaaggagccgctgcccctcgacccggacgatgacatcgaggttctgaccgaggat
ggaggcaaaggcgctggagaagggtcaccgaacaaacctctgaccagaaccgccagcagt
aaaaaaatctcccagccgcccccgggcagcctgctggactccatctccaacatctttggc
aggcgtcgtagcaccaactccttcagcacgtcaccagagaacgccgagggtccttctggg
ctctgcacggaggtgcgggttccctccacagctctgcacgtctttgaggcccatgacggg
gaggtcaacgccgtcaagttcagccccggctctcgtctcttagcaacaggagggatggac
cgcagagtgaagctgtgggaagtccttgctggtcactgcgagcccaaaggcgccctgacg
gggagtaacgcaggaatcaccagcatcgactttgacagcacgggttccttcctgctggct
gcgtccaacgacttcgccagtcggatctggaccgtggacgaccacagactgaggcacacc
ttgacgggtcacagtgggaaagtgctgtcggctcgcttcctcctggacaacacccggatc
gtctctgggagctacgaccgcacgctgaagctgtgggacctgcgcagcaaagtgtgtatc
aagaccgtgttcgccgggtccagttgcaacgacatcgtgtgcacagagcagtgcgtcatg
agcggacacttcgataagaaggttcggttctgggacatcagagcggagagcattgtgaag
gagctggagctgctgggtcgggttacgtctctggacctgaaccacgaccgcactgagctg
ctcacgtgttccagagacgacctggtgaagatcatcgacctgcgcaccgacgccatcaga
cagaccttcagtgctcagggttttaaatgtggagcggactggaccagagtgacgttcagt
cctgacggcgtttatgtggctggaggatcagctgatggcgccctctatgtttggaacgtg
ctgacggggaagcttgatcgcactctggaccgaaaccacaactctgccatcaactcggtg
tcgtggtcgccttcaggaacgtacgtggcgagcgtggagaggggcagtaagaccatcctc
tggtccgacatgtga
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